Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308E04f
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein p...    53   7e-07
BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protei...    53   7e-07
BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protei...    53   7e-07
AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.              53   7e-07
U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.                47   3e-05
AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein.        29   7.3  
AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial ...    29   7.3  

>U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein
           protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +3

Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +3

Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +3

Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +3

Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.
          Length = 171

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = +3

Query: 135 GKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXX 314
           G+   HKG  R++TSPEE++ Q + ++QK +  +EQ                        
Sbjct: 6   GRKGGHKGWARQYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESE 65

Query: 315 XXX--HPTKAKGVSGLIEVENPNRV 383
                +  K KGV G I++ENPNRV
Sbjct: 66  DEDDDYQQKRKGVEGFIDIENPNRV 90


>AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein.
          Length = 1153

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 123 KMPRGKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQ 242
           K P+ K   HK + R     +E E+++    +KKK RKE+
Sbjct: 842 KKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEK 881


>AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial CDS
           protein.
          Length = 1121

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 123 KMPRGKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQ 242
           K P+ K   HK + R     +E E+++    +KKK RKE+
Sbjct: 810 KKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEK 849


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,281,007
Number of Sequences: 237096
Number of extensions: 585145
Number of successful extensions: 1714
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)