BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E04f (517 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein p... 53 7e-07 BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protei... 53 7e-07 BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protei... 53 7e-07 AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein. 53 7e-07 U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein. 47 3e-05 AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein. 29 7.3 AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial ... 29 7.3 >U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein protein. Length = 181 Score = 52.8 bits (121), Expect = 7e-07 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = +3 Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302 MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60 Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383 + K KGV GLI++ENPNRV Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRV 89 >BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protein 1 protein. Length = 181 Score = 52.8 bits (121), Expect = 7e-07 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = +3 Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302 MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60 Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383 + K KGV GLI++ENPNRV Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRV 89 >BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protein 1 protein. Length = 181 Score = 52.8 bits (121), Expect = 7e-07 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = +3 Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302 MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60 Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383 + K KGV GLI++ENPNRV Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRV 89 >AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein. Length = 181 Score = 52.8 bits (121), Expect = 7e-07 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = +3 Query: 126 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 302 MP+G + HKGR R++TSPEE++ Q + ++QK + +EQ Sbjct: 1 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60 Query: 303 XXXXXXX--HPTKAKGVSGLIEVENPNRV 383 + K KGV GLI++ENPNRV Sbjct: 61 DESEDEEDDYQQKRKGVEGLIDIENPNRV 89 >U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein. Length = 171 Score = 47.2 bits (107), Expect = 3e-05 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Frame = +3 Query: 135 GKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXX 314 G+ HKG R++TSPEE++ Q + ++QK + +EQ Sbjct: 6 GRKGGHKGWARQYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESE 65 Query: 315 XXX--HPTKAKGVSGLIEVENPNRV 383 + K KGV G I++ENPNRV Sbjct: 66 DEDDDYQQKRKGVEGFIDIENPNRV 90 >AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein. Length = 1153 Score = 29.5 bits (63), Expect = 7.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3 Query: 123 KMPRGKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQ 242 K P+ K HK + R +E E+++ +KKK RKE+ Sbjct: 842 KKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEK 881 >AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial CDS protein. Length = 1121 Score = 29.5 bits (63), Expect = 7.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3 Query: 123 KMPRGKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQ 242 K P+ K HK + R +E E+++ +KKK RKE+ Sbjct: 810 KKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEK 849 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 45,281,007 Number of Sequences: 237096 Number of extensions: 585145 Number of successful extensions: 1714 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1712 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4876707572 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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