Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308E03f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.36
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.5
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 3.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 3.3
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 5.8
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 79 SVPSHRSNITARVTCSSPPLKIQNQ 153
S S+ +N+T +T PP+K+Q+Q
Sbjct: 951 SSASNVTNVTTNLTTILPPVKVQSQ 975
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Frame = -2
Query: 307 FLPVSRSHNLQE------LSPPPVMRLIDCQSTS 224
++P S S NLQE L PP+ ++ DC +TS
Sbjct: 398 YIPESSS-NLQEKTKIDLLEIPPIRKISDCSTTS 430
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 1.9
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Frame = +3
Query: 129 SAAKDSKPNVWWSLNGERLGTFNG----------HGGVIWCLDVDWQSINLITGGGDSSC 278
SAA + P V W+L+G L T NG HG VI +++ S ++ GG+ SC
Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 1.9
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Frame = +3
Query: 129 SAAKDSKPNVWWSLNGERLGTFNG----------HGGVIWCLDVDWQSINLITGGGDSSC 278
SAA + P V W+L+G L T NG HG VI +++ S ++ GG+ SC
Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -2
Query: 514 PIIEVTFESVISH 476
P +E+TFE+++SH
Sbjct: 257 PHLELTFENILSH 269
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -2
Query: 514 PIIEVTFESVISH 476
P +E+TFE+++SH
Sbjct: 257 PHLELTFENILSH 269
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 378 YTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIG 515
++T K++ P +F++ D ++ + P+L + S + MIG
Sbjct: 82 FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML---VISSFMERMIG 124
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 3.3
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +1
Query: 172 TANVLALSTATVV*YGALTSTGSQLISSQVVATVPAGYGIWRQARILQHSNPTLL 336
T L T + S + +I+ V +P+G GI+ + + S+ T+L
Sbjct: 1089 TCTTLTSQTIRISWMSPPLSAANGVITGYKVIVIPSGGGIYTKDTKITSSSETIL 1143
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 132 AAKDSKPNVWWSLNGERL 185
A+ + P + W L+G+RL
Sbjct: 417 ASGNPTPEITWELDGKRL 434
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 378 YTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIG 515
++T K++ P +F++ D ++ + P+L + S + MIG
Sbjct: 82 FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML---VISSFMERMIG 124
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 243 INLITGGGDSSCRLWDLETG 302
IN+I D+ RLW ++TG
Sbjct: 110 INIIRVRVDACDRLWGVDTG 129
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,805
Number of Sequences: 438
Number of extensions: 3824
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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