BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E03f (521 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.36 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.1 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.9 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.9 AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.5 AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.5 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 3.3 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.3 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 3.3 AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 5.8 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 25.4 bits (53), Expect = 0.36 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +1 Query: 79 SVPSHRSNITARVTCSSPPLKIQNQ 153 S S+ +N+T +T PP+K+Q+Q Sbjct: 951 SSASNVTNVTTNLTTILPPVKVQSQ 975 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 23.8 bits (49), Expect = 1.1 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 6/34 (17%) Frame = -2 Query: 307 FLPVSRSHNLQE------LSPPPVMRLIDCQSTS 224 ++P S S NLQE L PP+ ++ DC +TS Sbjct: 398 YIPESSS-NLQEKTKIDLLEIPPIRKISDCSTTS 430 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 23.0 bits (47), Expect = 1.9 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Frame = +3 Query: 129 SAAKDSKPNVWWSLNGERLGTFNG----------HGGVIWCLDVDWQSINLITGGGDSSC 278 SAA + P V W+L+G L T NG HG VI +++ S ++ GG+ SC Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 23.0 bits (47), Expect = 1.9 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Frame = +3 Query: 129 SAAKDSKPNVWWSLNGERLGTFNG----------HGGVIWCLDVDWQSINLITGGGDSSC 278 SAA + P V W+L+G L T NG HG VI +++ S ++ GG+ SC Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499 >AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 22.6 bits (46), Expect = 2.5 Identities = 7/13 (53%), Positives = 12/13 (92%) Frame = -2 Query: 514 PIIEVTFESVISH 476 P +E+TFE+++SH Sbjct: 257 PHLELTFENILSH 269 >AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 22.6 bits (46), Expect = 2.5 Identities = 7/13 (53%), Positives = 12/13 (92%) Frame = -2 Query: 514 PIIEVTFESVISH 476 P +E+TFE+++SH Sbjct: 257 PHLELTFENILSH 269 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 22.2 bits (45), Expect = 3.3 Identities = 11/46 (23%), Positives = 24/46 (52%) Frame = +3 Query: 378 YTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIG 515 ++T K++ P +F++ D ++ + P+L + S + MIG Sbjct: 82 FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML---VISSFMERMIG 124 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 22.2 bits (45), Expect = 3.3 Identities = 13/55 (23%), Positives = 24/55 (43%) Frame = +1 Query: 172 TANVLALSTATVV*YGALTSTGSQLISSQVVATVPAGYGIWRQARILQHSNPTLL 336 T L T + S + +I+ V +P+G GI+ + + S+ T+L Sbjct: 1089 TCTTLTSQTIRISWMSPPLSAANGVITGYKVIVIPSGGGIYTKDTKITSSSETIL 1143 Score = 21.0 bits (42), Expect = 7.7 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +3 Query: 132 AAKDSKPNVWWSLNGERL 185 A+ + P + W L+G+RL Sbjct: 417 ASGNPTPEITWELDGKRL 434 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 22.2 bits (45), Expect = 3.3 Identities = 11/46 (23%), Positives = 24/46 (52%) Frame = +3 Query: 378 YTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIG 515 ++T K++ P +F++ D ++ + P+L + S + MIG Sbjct: 82 FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML---VISSFMERMIG 124 >AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein protein. Length = 411 Score = 21.4 bits (43), Expect = 5.8 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +3 Query: 243 INLITGGGDSSCRLWDLETG 302 IN+I D+ RLW ++TG Sbjct: 110 INIIRVRVDACDRLWGVDTG 129 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 154,805 Number of Sequences: 438 Number of extensions: 3824 Number of successful extensions: 15 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14600229 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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