Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308E03f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 136 1e-32
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 135 2e-32
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 135 2e-32
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 135 2e-32
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 72 3e-13
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 71 6e-13
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 67 6e-12
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 67 6e-12
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 59 2e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 1e-08
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 54 8e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 53 1e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 1e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 53 1e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 1e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 2e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 52 3e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 52 3e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 3e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 51 4e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 51 4e-07
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 50 9e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 50 1e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 49 2e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 49 2e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 9e-06
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 47 9e-06
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 47 9e-06
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 47 9e-06
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 45 3e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 45 4e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 6e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 44 6e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 44 6e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 44 8e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 8e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 8e-05
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 42 2e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 42 2e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 42 2e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 42 2e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 3e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 42 3e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 41 4e-04
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 41 6e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 41 6e-04
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 40 8e-04
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 40 8e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 8e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 40 0.001
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 40 0.001
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 39 0.002
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 39 0.002
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 39 0.002
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 39 0.002
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 39 0.002
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.003
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 38 0.003
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 38 0.003
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 38 0.004
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 38 0.004
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 38 0.004
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 38 0.004
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 38 0.005
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 38 0.005
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.005
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.007
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.007
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.009
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 37 0.009
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.012
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.017
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.017
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 36 0.017
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.017
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.017
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 36 0.017
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.022
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.022
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.022
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 35 0.029
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 35 0.029
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 35 0.038
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 34 0.050
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 34 0.050
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 34 0.050
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 34 0.050
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.050
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 34 0.067
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 34 0.067
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 34 0.067
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 34 0.067
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 34 0.067
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 33 0.088
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 33 0.088
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 33 0.088
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.088
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 33 0.088
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 33 0.12
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.15
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 33 0.15
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 33 0.15
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 32 0.20
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.20
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.20
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 32 0.27
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 32 0.27
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 32 0.27
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 32 0.27
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 32 0.27
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 32 0.27
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.36
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 31 0.36
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 0.36
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 31 0.47
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 31 0.47
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.47
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 31 0.62
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 31 0.62
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.62
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 0.62
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 30 0.82
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 0.82
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 30 0.82
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 30 0.82
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 30 0.82
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 1.1
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 30 1.1
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 1.4
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 1.4
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 29 1.4
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 1.4
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 1.4
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 1.4
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 29 1.4
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 29 1.9
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 29 1.9
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 29 1.9
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 29 2.5
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 29 2.5
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 29 2.5
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 29 2.5
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 29 2.5
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 2.5
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 2.5
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 2.5
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 28 3.3
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 28 3.3
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 28 3.3
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 28 3.3
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 28 3.3
At5g23070.1 68418.m02697 thymidine kinase, putative similar to t... 28 4.4
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 28 4.4
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 28 4.4
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 4.4
At4g13630.1 68417.m02121 expressed protein contains Pfam profile... 27 5.8
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 27 5.8
At3g04660.1 68416.m00499 F-box family protein contains F-box dom... 27 5.8
At2g25800.1 68415.m03096 expressed protein 27 5.8
At5g54230.1 68418.m06755 myb family transcription factor (MYB49)... 27 7.7
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 27 7.7
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 27 7.7
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain... 27 7.7
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 136 bits (328), Expect = 1e-32
Identities = 56/124 (45%), Positives = 82/124 (66%)
Frame = +3
Query: 51 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 230
M+P++++GH+R +T ++YNR GDLLFS AKD P VW++ NGERLGT+ GH G +WC D+
Sbjct: 28 MRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDI 87
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 410
S LITG D + +LWD+++GK + T K + R+ +FS + A TTD +G
Sbjct: 88 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSS 147
Query: 411 EVFV 422
+ V
Sbjct: 148 AIHV 151
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +3
Query: 234 WQSIN--LITGGGDSSCRLWDLETGK 305
W +N +++GG D++ R+WD ETGK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGK 208
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 123 LFSAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 293
+ S +D+ +W + G+ L + GH I L + +TG D + +LWD+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 294 ET 299
T
Sbjct: 250 RT 251
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 135 bits (326), Expect = 2e-32
Identities = 56/124 (45%), Positives = 82/124 (66%)
Frame = +3
Query: 51 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 230
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 410
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 411 EVFV 422
+ V
Sbjct: 121 AIHV 124
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 234 WQSIN--LITGGGDSSCRLWDLETGK 305
W +N +++GG D R+WD ETGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 135 bits (326), Expect = 2e-32
Identities = 56/124 (45%), Positives = 82/124 (66%)
Frame = +3
Query: 51 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 230
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 410
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 411 EVFV 422
+ V
Sbjct: 121 AIHV 124
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 234 WQSIN--LITGGGDSSCRLWDLETGK 305
W +N +++GG D R+WD ETGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 135 bits (326), Expect = 2e-32
Identities = 56/124 (45%), Positives = 82/124 (66%)
Frame = +3
Query: 51 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 230
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 410
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 411 EVFV 422
+ V
Sbjct: 121 AIHV 124
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 234 WQSIN--LITGGGDSSCRLWDLETGK 305
W +N +++GG D R+WD ETGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 71.7 bits (168), Expect = 3e-13
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 227
PL+ GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQ 371
+D +I + D + ++W+ TG + + + VR C FS ++
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHR 111
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = +3
Query: 108 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
+ G+ + +D + + GE +G GH G + C+ + +G D + R+W
Sbjct: 233 KHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 70.5 bits (165), Expect = 6e-13
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 227
PL+ GH R + + Y+ +G L SA+KDS+P + G+ +GTF GH G +W
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 356
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 279 RLWDLETGKNIATLKSNSSVRTCNFS 356
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 67.3 bits (157), Expect = 6e-12
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 227
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 356
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 108 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
+ G+ + +D V+ GE +G GH G + C+ ++ +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 279 RLWDLETGKNIATLKSNSSVRTCNFS 356
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 67.3 bits (157), Expect = 6e-12
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 227
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 356
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 108 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
+ G+ + +D V+ GE +G GH G + C+ ++ +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 279 RLWDLETGKNIATLKSNSSVRTCNFS 356
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/93 (27%), Positives = 50/93 (53%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L+ +GH R++ I + ++G L S DS VW G + F GH ++ ++
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 240 SINLITGGGDSSCRLWDLETGKNIATLKSNSSV 338
+L +GG D+ CR+WDL K++ + +++++
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Score = 43.6 bits (98), Expect = 8e-05
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH + ++ ++ G L + + D +W G L GH ++ +
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGAL 395
Query: 249 LITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSAYQAA 377
+ G DS R+WDL TG++I + + V + NFS + Y A
Sbjct: 396 AASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 63 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
++ H ++Q+KY +EG L +A+ D K N+W + + + GH + LD+
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD 519
Query: 240 SINLITGGGDSSCRLW 287
S + T D + +LW
Sbjct: 520 SSCIATVSHDRTIKLW 535
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/87 (27%), Positives = 47/87 (54%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
GH+ I+ + ++ + + SA+ D +W G + T GH +C++ + QS +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNS 332
++G D + R+WD+ TGK + L ++S
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHS 155
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLN---GERLGTFNGHGGVIWCLDV 230
L H RA++ +K++ +G LL SA+ D + ++N E + F GH I +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC-NFS 356
+ +++ D + +LWD+ETG I TL +++ C NF+
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH + +N + +++ S + D +W G+ L H + +D +
Sbjct: 109 LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 246 NLITGGGDSSCRLWDLETGKNIATL 320
+++ D CR+WD TG + TL
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT-FNGHGGVIWCLDVDWQ 239
+L H +T + +NR+G L+ S++ D +W S G + T + + +
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 240 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
++ G D++ RLW++ + K + T + + + C
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 245
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/85 (17%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 87 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LIT 257
++ ++++ G + D+ +W + + L T+ GH +C+ + N +++
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 258 GGGDSSCRLWDLETGKNIATLKSNS 332
G D+ +W+L + K + L+ ++
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHT 285
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 53.6 bits (123), Expect = 8e-08
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE--RLGTFNGHGGVIWCLDVD 233
++L GH A+ +K+N G L+ S + D + +W ++G+ GH I LD+
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMVLKGHKNAI--LDLH 103
Query: 234 WQS--INLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTC 347
W S +++ D + R WD+ETGK I + +SS V +C
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 87 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 266
IT + ++ D +F+ D+ VW GE T GH I + + L+T G
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 267 DSSCRLWDL 293
D+ +WD+
Sbjct: 243 DNKLCVWDM 251
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNGERLGTFNGHGGVIW--C 221
+ L+GHQ IT + + +G L + D+K VW ++ + F GH
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 222 LDVDW--QSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNF 353
L W + G D +WD + + I L ++ SV C F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 249 LITGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
+ TGG D+ ++WDL G+ TL+ + T
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTIT 226
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH R I+ I++ +G + S D+ VW G+ L F H G I LD
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
Query: 249 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 353
L TG D + + WDLET + I + + ++ VR+ F
Sbjct: 199 LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKF 234
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
GH+ + ++++ G+ L S + D+ +W + T+ GH I + +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 353
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF 192
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
+ L GH A+ + ++ L+ + A +W + + F GH C V++
Sbjct: 52 MSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSN--CSAVEFH 109
Query: 240 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFS 356
L +G D++ ++WD+ I T K +S + T F+
Sbjct: 110 PFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT 151
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/72 (22%), Positives = 28/72 (38%)
Frame = +3
Query: 120 LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET 299
L + D K N+W L + GH + + D + ++ G +LWD+E
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 300 GKNIATLKSNSS 335
K + + S
Sbjct: 90 AKMVRAFTGHRS 101
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 174 GERLGTFNGHGGVIWCLDVDWQSINL-ITGGGDSSCRLWDLETGKNIATLKSNSS 335
G +L F H + CL + ++ L ITGG D LW + ++ +L ++S
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH R I+ I+++ +G + S D+ VW G+ L F H G I LD
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 249 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 353
L TG D + + WDLET + I T + ++ VR F
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
Score = 44.0 bits (99), Expect = 6e-05
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
GH+ + ++++ G+ L S + D+ VW + + T+ GH I ++ +
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 353
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 141
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
+ L GH + + +N E L+ + A +W + + F GH C V++
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSN--CSAVEFH 58
Query: 240 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFS 356
L +G D++ R+WD I T K ++ + T FS
Sbjct: 59 PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 100
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GHQ+ + + ++ +G + SA+ D +W + G+ + F GH G ++ + S
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 246 NLITGGGDSSCRLWDLETGK 305
L++G DS+ ++W++ T K
Sbjct: 416 LLLSGSKDSTLKIWEIRTKK 435
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+ +GH + Q+ ++ + LL S +KDS +W + GH ++ +D
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG 456
Query: 243 INLITGGGDSSCRLW 287
+++GG D +LW
Sbjct: 457 EKVVSGGKDRVLKLW 471
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 189 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 335
T GH + C+ L +G GD++ RLWDL T + T K + +
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN 152
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/92 (25%), Positives = 45/92 (48%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
+ L GH A+T +K+ +G ++++ ++D +W + G+ + GHG I L + +
Sbjct: 235 ICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Query: 240 SINLITGGGDSSCRLWDLETGKNIATLKSNSS 335
+ L TG D + R + K A + N +
Sbjct: 294 YV-LRTGAFDHTGRQYPPNEEKQKALERYNKT 324
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW--Q 239
+ GH A+ + ++ +G L S + D+ +W L T GH W L V W
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN--WVLTVAWSPD 162
Query: 240 SINLITGGGDSSCRLWDLETGK 305
+L++G W+ + G+
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGE 184
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 292
Query: 249 LITGGGDSSCRLWDLET 299
L TG D + + WDLET
Sbjct: 293 LATGSADKTVKFWDLET 309
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 190 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 249
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSN 329
+++GG D+ ++WDL GK + KS+
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
H A+ +K R+ +L + +D K N+W + + GH I + D +
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNSS 335
G + +LWDLE K + TL + S
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRS 195
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L L GH I + ++ L+ + A +W + + T GH C+ V++
Sbjct: 146 LSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSN--CVSVNFH 203
Query: 240 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 332
+G D++ ++WD+ I T K ++
Sbjct: 204 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 236
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L L GH + + + +FSA D + W + + +++GH ++CL +
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPT 271
Query: 240 SINLITGGGDSSCRLWDLETGKNIATLKSNSS 335
L+TGG DS CR+WD+ T I L + +
Sbjct: 272 LDVLLTGGRDSVCRVWDIRTKMQIFALSGHDN 303
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
GH + + + D+L + +DS VW ++ +GH + + +
Sbjct: 258 GHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQV 317
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSN-SSVR 341
+TG D++ + WDL GK ++TL + SVR
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVR 348
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/95 (22%), Positives = 38/95 (40%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
++QGH + + ++ + + + D +W G T GH + L V +
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
+ + G D + WDLE K I + + S C
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYC 265
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +3
Query: 150 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETG 302
P W + GH G + + D + TG D + ++WD+ TG
Sbjct: 158 PRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 249 LITGGGDSSCRLWDLET 299
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
H A+ +K R+ +L + +D K N+W + + GH I + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNSS 335
G + +LWDLE K + TL + S
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSN 329
+++GG D+ ++WDL GK + KS+
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 240 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 332
+G D++ ++WD+ I T K ++
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 180 RLGTFNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSS 335
+L F H + CL + +S L+TGG D LW + I +L +SS
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 249 LITGGGDSSCRLWDLET 299
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
H A+ +K R+ +L + +D K N+W + + GH I + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNSS 335
G + +LWDLE K + TL + S
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSN 329
+++GG D+ ++WDL GK + KS+
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 240 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 332
+G D++ ++WD+ I T K ++
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 180 RLGTFNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSS 335
+L F H + CL + +S L+TGG D LW + I +L +SS
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 51.6 bits (118), Expect = 3e-07
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L L GH + + + +FSA D + W + + +++GH ++CL +
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPT 265
Query: 240 SINLITGGGDSSCRLWDLETGKNIATLKSNSSV 338
++TGG DS CR+WD+ T I L +S V
Sbjct: 266 LDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+LQGH + + ++ + + + D +W G T GH G + L V +
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 243 INLITGGGDSSCRLWDLETGKNI 311
+ + G D + WDLE K I
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVI 247
Score = 33.9 bits (74), Expect = 0.067
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
GH + + + D++ + +DS VW ++ H ++ + +
Sbjct: 252 GHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQV 310
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSN 329
ITG DS+ + WDL GK++AT+ ++
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNH 336
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +3
Query: 111 EGDLLFSAAKDSKPNVW----WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSC 278
E +L +A + P+ W W + GH G + + D + TG D +
Sbjct: 135 ERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTI 194
Query: 279 RLWDLETG 302
++WD+ TG
Sbjct: 195 KIWDVATG 202
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 254
H ++ +K+ R LFS KD W + E L T GH IWCL + + L+
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLV 682
Query: 255 TGGGDSSCRLWD 290
TG D S R WD
Sbjct: 683 TGSHDRSMRRWD 694
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH+ +T + + G L S++KD VW + +GH +W +D D +
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSS 335
++TG D R + ++ + +L S+S+
Sbjct: 204 YVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 254
H+ A+T ++YN+ G +L S +KD+ +W + L GH + L L+
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 255 TGGGDSSCRLWDLET 299
+ D R+WDLET
Sbjct: 165 SSSKDKFLRVWDLET 179
Score = 35.5 bits (78), Expect = 0.022
Identities = 20/96 (20%), Positives = 44/96 (45%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L L GH+ + I + +G+L+ + ++D +W G+ + HG + +
Sbjct: 576 LSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRN 635
Query: 240 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
+ L + G D + WD + +++ TL+ + + C
Sbjct: 636 THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWC 671
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
G A+T I + L+ D +W + G FN H G + L + L
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 252 ITGGGDSSCRLWDL 293
+G D+ LWD+
Sbjct: 122 ASGSKDNDIILWDV 135
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +3
Query: 72 GHQRAITQIKY-NREGDLLFSAAKDSKPNVWWSLN-GERLGTFNGHGGVIWCLDVDWQSI 245
GH + ++ I++ ++G LL SA D K +W N G+ + T+ GH + +
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKS 326
+T G D + + WD ETG+ I+T +
Sbjct: 340 KFLTAGYDKNIKYWDTETGQVISTFST 366
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT---FNGHGGVIWCLDVDWQSI 245
H ++ I + G+ L + + D++ ++ + +L F GH + V++
Sbjct: 454 HMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 513
Query: 246 N--LITGGGDSSCRLWDLETGKNIATLKSNSSV 338
+++G G+ C WD ++ K TLK ++ V
Sbjct: 514 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 50.0 bits (114), Expect = 9e-07
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = +3
Query: 69 QGHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 422
+GG D LWDL GK + +L++NS + FS + Y T+ H +++
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATE----HGIKIWD 262
Query: 423 IDTRTIDE 446
+++++I E
Sbjct: 263 LESKSIVE 270
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/75 (18%), Positives = 30/75 (40%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH + + + +G S + D + +W G F GH + + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 246 NLITGGGDSSCRLWD 290
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN----GHGGVIWCLDVDWQ 239
GH + + + ++ + + SA++D +W +L GE T + GH + C+
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 240 SI--NLITGGGDSSCRLWDLETGKNIATLKSNS 332
++ +++ D + ++W+L K +TL ++
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 194
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDVDWQSI 245
+GH I+ + ++ + SA+ D +W + + E L GH ++C++ + S
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNS 332
+++G D + R+W+++TGK + +K++S
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH AI+ +K++ +G+LL SA+ D +W + N + + GH I D+ W S
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI--SDLAWSSD 96
Query: 246 NLITGGGDSSC--RLWD 290
+ T C R+WD
Sbjct: 97 SHYTCSASDDCTLRIWD 113
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/91 (21%), Positives = 41/91 (45%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+L+GH + + +N +L+ S + D +W G+ + H I + +
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNSS 335
+++ D SC++WD + G + TL + S
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 84 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LI 254
A++ K++ G + A DS + G+ L + GH ++C+ + N ++
Sbjct: 215 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 274
Query: 255 TGGGDSSCRLWDLETGKNIATLKSNS 332
+G D+ LWDL+ + L+ ++
Sbjct: 275 SGSEDNCVYLWDLQARNILQRLEGHT 300
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.8 bits (111), Expect = 2e-06
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = +3
Query: 87 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 266
+T + +N EG LL + + D + +W +LNGE + T + H G I+ L + + L+TG
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 267 DSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTID 443
D + +WD++ + + +S ++ + A +TD +M + C++
Sbjct: 386 DRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD-SMIYLCKIGETRPAKTF 444
Query: 444 ETVSGQAPILKWEITDSKVTS 506
G+ +KW+ T S + S
Sbjct: 445 TGHQGEVNCVKWDPTGSLLAS 465
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 123 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETG 302
L SA+ DS +W + G+ L +FNGH ++ L + +G D S +W ++ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 303 KNIATLKSNSSV 338
K + T N +
Sbjct: 574 KIVKTYTGNGGI 585
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ-S 242
L H+ I +K+N++GD L + + D VW E F H G LDVDW+ +
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGP--TLDVDWRNN 418
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
++ T DS L + + T + C
Sbjct: 419 VSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNC 453
Score = 36.7 bits (81), Expect = 0.009
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--------- 224
GHQ + +K++ G LL S + DS +W + H I+ +
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 225 DVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSA-YQAAYTTDKAM 398
+ + + L + DS+ +LWD E GK + + + V + FS + Y A+ + DK++
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Query: 399 GHPCEVFVIDTRTIDETVSGQAPILK--WEITDSKVTS 506
++ I I +T +G I + W +K+ +
Sbjct: 566 ----HIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAA 599
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 189 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
TF GH G + C+ D L + DS+ ++W+++ + L+ ++
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHT 490
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+L+GH+ A+ ++N +G+ + KD +W G + T+ HG + + V +
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKS-NSSVRTCNFSYSA 365
+ GGD WD+ TG+ I + + V F+ S+
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS 114
Score = 33.5 bits (73), Expect = 0.088
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+ H R + + + S D + W G + F GH G + + + S
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSV 116
Query: 249 LITGGGDSSCRLWD 290
+++ G D S R+WD
Sbjct: 117 VVSAGFDRSLRVWD 130
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.8 bits (106), Expect = 9e-06
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH+R I ++++ + +A+ D +W +G L TF GH +
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 246 NLITGGGDSSCRLWDLETGKNIAT 317
++ G D +LW++ T + IAT
Sbjct: 597 QFVSCGADGLLKLWNVNTSECIAT 620
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH ++ + + +G S D +W E + T++ H +W L V ++
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEM 639
Query: 249 LITGGGDSSCRLWDLETGKN 308
+ TGGGD+ LW T +
Sbjct: 640 IATGGGDAVINLWHDSTASD 659
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DVDWQS 242
+GH+ + + + G LL +A D K VW G F GH GV+ + D
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNK 158
Query: 243 INLITGGGDSSCRLWDL 293
LI+G D++ R+WDL
Sbjct: 159 NILISGSDDATVRVWDL 175
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/98 (19%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 45 LNMKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 221
+N+K ++ H + I + R L+ + ++D ++W + + T GH I+
Sbjct: 487 INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFS 546
Query: 222 LDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 335
++ ++T GD + ++W + G + T + ++S
Sbjct: 547 VEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
++G +T + + + LLFSA + VW + + ++ GH G + +
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Query: 246 NLITGGGDSSCRLWDLETG 302
L T G D +WD++ G
Sbjct: 116 LLATAGADRKVLVWDVDGG 134
Score = 34.7 bits (76), Expect = 0.038
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +3
Query: 63 MLQGHQRAITQIK--YNREGDLLF-SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 233
+L GH+ + + + G++L + +KD +W + + +G GH G I +
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 234 WQSIN-LITGGGDSSCRLWDLE 296
+S + ++G GD + ++W L+
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLD 477
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 161
+++ H A+T I + +G LFSA +D N+W
Sbjct: 187 IMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 72 GHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 398
+GG D LWDL GK + +L++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH + + + +G L S KD +W G++L + G +I L +
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 246 NLITGGGDSSCRLWDLETGKNIATLK 323
+ ++S R+WDLE+ + LK
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLK 272
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/75 (18%), Positives = 31/75 (41%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
+ GH + + + +G S + D + +W GE F GH + + +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 246 NLITGGGDSSCRLWD 290
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 30.7 bits (66), Expect = 0.62
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 242
GH + + + ++ + + SA++D +W +L GE + +GH + C+ +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNT 161
Query: 243 I--NLITGGGDSSCRLWDLETGKNIATLKSNS 332
+ +++ D + ++W+L+ K TL +S
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNTLAGHS 193
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L QGH + + Y+ + LL + A D+K VW ++G TF H + L
Sbjct: 343 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 402
Query: 240 SINLITGGGDSSCRLWDLETGKNIAT 317
+ +L++ D + R WD + KN T
Sbjct: 403 NHSLLSASLDGTVRAWDFKRYKNYKT 428
Score = 30.3 bits (65), Expect = 0.82
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDW 236
+L ++ +T +N G+ L F AK + VW W L GH + C+
Sbjct: 301 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 359
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
S L TG D+ ++W++ +G T +++ T
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 395
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L QGH + + Y+ + LL + A D+K VW ++G TF H + L
Sbjct: 383 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 442
Query: 240 SINLITGGGDSSCRLWDLETGKNIAT 317
+ +L++ D + R WD + KN T
Sbjct: 443 NHSLLSASLDGTVRAWDFKRYKNYKT 468
Score = 30.3 bits (65), Expect = 0.82
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDW 236
+L ++ +T +N G+ L F AK + VW W L GH + C+
Sbjct: 341 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 399
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
S L TG D+ ++W++ +G T +++ T
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 435
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL--NGE-----RLG-TFNGHGGVIW 218
+L GH + + ++++ D+LFS + D+ VWWS +GE LG + NGH +W
Sbjct: 158 VLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 219 CLDVDWQSINLITGGGDSSCRLWDLETGK 305
+ + ++T D + ++W + K
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 54 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGERLGTFNGHGGVIWCLD 227
K ++ + H R + ++ G LL +A+ D +W + E + T GH + +
Sbjct: 66 KTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 228 VDWQSINLITGGGDSSCRLWDLETG 302
+ L T D S +W++ G
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 72 GHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
GH+ ++ +++ N + SA+ D VW N + + GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 398
+GG D LWDL GK + +L++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH + + + +G S + D + +W GE F GH + + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 246 NLITGGGDSSCRLWD 290
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 32.3 bits (70), Expect = 0.20
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH + + + +G L S KD +W G++L + G +I L +
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 246 NLITGGGDSSCRLWDLETGKNIATLK 323
+ ++S R+WDLE+ + LK
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--CLDVDWQSI 245
GH + + + ++ + + SA++D +W +L + G G W C+ ++
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 246 --NLITGGGDSSCRLWDLETGK 305
+++ D + ++W+L+ K
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCK 184
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLN------GERLGTFNGHGGVIWC 221
+++ H +T I + D++ +A++D K + W L G GH +
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRD-KSIILWKLTKDDKSYGVAQRRLTGHSHFVED 68
Query: 222 LDVDWQSINLITGGGDSSCRLWDLETGK 305
+ + ++G D RLWDL TG+
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGE 96
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 44.0 bits (99), Expect = 6e-05
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSIN 248
GH + + ++ LL S KD +W + +G L + +GH ++ L V W Q+ N
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIV--LSVKWNQNGN 323
Query: 249 -LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 422
L+T D +L+D+ T K + + + ++ T + ++ + + + G C V
Sbjct: 324 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIV 382
Score = 33.9 bits (74), Expect = 0.067
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH+ + +K+N+ G+ L +A+KD ++ + L +F GH + L W
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL--AWHPC 363
Query: 246 N---LITGGGDSSCRLW 287
+ ++G D S W
Sbjct: 364 HEEYFVSGSSDGSICHW 380
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDWQS 242
LQ H I + + L +A+ D +W +L+G +L GH +W D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIW-NLDGFKLEKVLTGHERWVWDCDFSMDG 271
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
L+T D++ RLW + GK +++ C
Sbjct: 272 EYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 221
+L GH+R + ++ +G+ L +A+ D+ +W G+ + H C
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 44.0 bits (99), Expect = 6e-05
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG---GVIWCLDVD 233
M GH +T + +G L+ + + D+ VW E + GH + CLD++
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDIN 251
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSA 365
S I+G D S + ++ TGK +++L S++ SV FS S+
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSS 296
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +3
Query: 171 NGERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
N + + TF GH G ++ L L+ TGGGD LW + G A L + +C
Sbjct: 59 NDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSC 118
Query: 348 NFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKW 479
++S Y + ++F + T+ + G ++W
Sbjct: 119 -LAFS-YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEW 160
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+L G I ++++ G ++ + ++D +W + L F+GH + C D
Sbjct: 150 VLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDG 209
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSN 329
+ TG D+S +W+ +T ++I +K +
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVKGH 238
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL- 251
H +T + N L S +KD ++ + G+ + + N H + C+ S +
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 252 --ITGGGDSSCRLWDLE 296
TGG D +WDL+
Sbjct: 301 LAATGGMDKKLIIWDLQ 317
Score = 33.5 bits (73), Expect = 0.088
Identities = 16/87 (18%), Positives = 40/87 (45%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 236
P + H+ +T + + L + + ++W SL G + T++GH + + V
Sbjct: 321 PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVST 380
Query: 237 QSINLITGGGDSSCRLWDLETGKNIAT 317
+ +++ D++ R+++ +N T
Sbjct: 381 NTDFIVSVSVDNTARVFESSEFQNKVT 407
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +3
Query: 111 EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWD 290
+ L+ + D K +W NG+ GH + CL + L +GG D +++D
Sbjct: 82 DATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Query: 291 LETG 302
+G
Sbjct: 142 ASSG 145
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 43.6 bits (98), Expect = 8e-05
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI---W---CLDVD 233
GH A+T + +R G+ + ++ +D+ NV+ + E GT G + W C+ D
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPD 456
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFS 356
+ G D S +W L G ++ LK +S + C++S
Sbjct: 457 DDYV--AAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +3
Query: 111 EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWD 290
+G +FS D +W G+ L GH + + + ++T G D+ ++D
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 291 LETGKNIATLKSNSSVRTCNFSYS 362
T + TL+++ + N+S S
Sbjct: 428 TRTLEICGTLRASGNRLASNWSRS 451
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 NGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATL 320
+ H G + ++ S L TGG D + ++WD +G I +L
Sbjct: 228 HAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSL 269
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 8e-05
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 236
P + +GH+ ++ + N G +L S + VW G + GH + L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSS---VRTCNFSYS 362
++G DS RLWDL + + T ++ CN S+S
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 54 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDV 230
K + L+GH + + + G S + DS + W L +R L T+ H +W L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL-WDLGQQRCLHTYAVHTDSVWALAC 305
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 410
+ ++ +GG D L DL T +++ ++ ++ A T P
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSVERWPA 365
Query: 411 EV 416
EV
Sbjct: 366 EV 367
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 8e-05
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +3
Query: 57 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 236
P + +GH+ ++ + N G +L S + VW G + GH + L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSS---VRTCNFSYS 362
++G DS RLWDL + + T ++ CN S+S
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 54 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDV 230
K + L+GH + + + G S + DS + W L +R L T+ H +W L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL-WDLGQQRCLHTYAVHTDSVWALAC 305
Query: 231 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 410
+ ++ +GG D L DL T +++ ++ ++ A T P
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSVERWPA 365
Query: 411 EV 416
EV
Sbjct: 366 EV 367
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDW 236
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSN 329
++T G D +CR+W ++ G + +K +
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIKEH 316
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDW 236
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSN 329
++T G D +CR+W ++ G + +K +
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIKEH 316
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +3
Query: 87 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 266
I + + + +F+AA DS W +G+ TF GH + + + ++TG
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 267 DSSCRLWDLETGKNIATLKS 326
D + R+WD +TGK + + S
Sbjct: 222 DGTARIWDCKTGKCVKVIGS 241
Score = 34.3 bits (75), Expect = 0.050
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 222 LDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
+ VD QS ++ T GDS WD+E+GK T K +S
Sbjct: 165 MSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/97 (22%), Positives = 43/97 (44%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 254
H + +T + ++R+G L S + D + +G+ L F GH + +I
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 255 TGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSA 365
T D + ++WD +T + T K +R + S ++
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNS 400
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +3
Query: 99 KYNREGDLLFSAAKDSKPNVWWSLNGERLG--------TFNGHGGVIWCLDVDWQSINLI 254
+++ +G L S++ D VW ++G+ +F H + C+D S L
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLA 279
Query: 255 TGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAYQAAYTT 386
+G D ++W + TG I ++S V + +FS Q T+
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTS 324
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 66 LQGHQRAITQIKYNR-EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
L+GH + + ++ + +LFS + D N+ + LG+ +GH + +D
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNS 332
+ TG D + RLWDL+ I T+ +++
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTMSNHN 285
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ-SIN 248
GH + + + G + S++ DS V+ + +W + + + +I
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Query: 249 LITGGGDSSCRLWDLETGKNIATL 320
+ GG +S +LWD + + I+TL
Sbjct: 118 AVAGGSSASVKLWDTASWRLISTL 141
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.5 bits (93), Expect = 3e-04
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +3
Query: 54 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 233
KPL + + +I +N GD F V + + L T H +C+ +D
Sbjct: 141 KPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAID 200
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATL-KSNSSVRTCNFSYSA-YQAAYTTD 389
+ G DS LWD+ + T K VRT +F+YS Y A+ + D
Sbjct: 201 PKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASED 254
Score = 38.7 bits (86), Expect = 0.002
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLG---TFNGHGGVIWCLDVDW 236
QGH++ + + +N G L S + D +W +G GH + L D
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 237 QSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSY 359
+ +L+ T GD S RLWD +GK T + S N +Y
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGK--CTQQVELSGENINITY 116
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWCLDVDWQS 242
L+GHQ + + +N G LL S + D + N+W + + L + + GH I+C ++
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 243 IN--LITGGGDSSCRLWD 290
+ +++G GD+ RL++
Sbjct: 106 SDELVVSGAGDAEVRLFN 123
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/104 (25%), Positives = 47/104 (45%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH+ A+ ++R G + + + D +W L + GH G I L V +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAA 377
+ + D R+W L G I+ L+ ++ T ++S QA+
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTA-IAFSPRQAS 403
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GH+ IT + + L+ SA+ D VW +G + GH G + + + +
Sbjct: 344 RGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQAS 403
Query: 249 ---LITGGGDSSCRLWD 290
L++ D +CR+WD
Sbjct: 404 VYQLLSSSDDGTCRIWD 420
Score = 33.5 bits (73), Expect = 0.088
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +3
Query: 99 KYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSC 278
K++R +L + +KP+ + + GH ++C D +ITG D
Sbjct: 271 KHHRAPSILSACHAIAKPSTMVQ-KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLV 329
Query: 279 RLWDLETGKNIATLKSN 329
++W +ET +A+ + +
Sbjct: 330 KIWSMETALCLASCRGH 346
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 81 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV-DWQSINLIT 257
R + I ++ + + +A D + VW + +G + GH + LDV + ++
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMS 657
Query: 258 GGGDSSCRLWDLETG 302
G D +WD+ G
Sbjct: 658 AGYDGKTIIWDIWEG 672
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +3
Query: 45 LNMKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 224
LN + +GH + +++ G S + D +W + L GH
Sbjct: 449 LNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH-----LS 503
Query: 225 DVDWQ-SINLI-TGGGDSSCRLWDLETGK 305
DVDW + N I TG D + RLWD++TG+
Sbjct: 504 DVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
GH+ + + + +G + S +D +W + GH +W L + L
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 252 ITGGGDSSCRLWDLETGKNI 311
+G D + +LWD+ + +
Sbjct: 599 ASGSADCTVKLWDVTSSTKL 618
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +3
Query: 51 MKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 227
++PL ++ GH ++ + ++ + + + + D +W GE + F GH ++ L
Sbjct: 492 IQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA 548
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
+ + +G D + +WDL T + I L ++S + SYS
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC-VWSLSYS 592
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/78 (19%), Positives = 32/78 (41%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 242
+L GH + ++ GD + S++ D+ +W + L + GH +W
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 243 INLITGGGDSSCRLWDLE 296
+ D + R+W ++
Sbjct: 473 HYFASCSHDRTARIWSMD 490
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 161
L GH + + Y+ EG LL S + D +W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 171 NGERLGTFN-GHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKS-NSSVRT 344
NG R T GH G ++ +++ D++ RLW + N+ K N V
Sbjct: 406 NGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 465
Query: 345 CNFS-YSAYQAAYTTDK 392
FS + Y A+ + D+
Sbjct: 466 AQFSPFGHYFASCSHDR 482
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH ++ + ++ + D++ S ++D VW + L TF W L V +
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVH-PEM 302
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNS 332
NL+ G DS ++ LE + L +S
Sbjct: 303 NLLAAGHDSGMIVFKLERERPAFALSGDS 331
Score = 33.5 bits (73), Expect = 0.088
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH I ++++ E + SA+ D +W + + GH + C +
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 246 NLITGGGDSSCRLWDL 293
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLNGERLGTFNGHGGVIWCLDVDW 236
+L+GH R + ++ L+ S A D + +W + T GH + +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLK 323
+ +++ D S R+WD + T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGLQTFR 287
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 171 NGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL-ETGKNIATLKSN-SSVRT 344
NG+ +GT GH + + TG D +CR+WD + +++A LK N +VR+
Sbjct: 308 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 367
Query: 345 CNFS 356
F+
Sbjct: 368 IRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 171 NGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL-ETGKNIATLKSN-SSVRT 344
NG+ +GT GH + + TG D +CR+WD + +++A LK N +VR+
Sbjct: 302 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 361
Query: 345 CNFS 356
F+
Sbjct: 362 IRFT 365
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH+ A+ +R G + + + D VW L + GH G I L V +I
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
+ + D R+W L G ++ L+ ++ T
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVT 333
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD---WQ 239
+GH+ IT + + + SA+ D VW +G + GH G + +
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 240 SINLITGGGDSSCRLWD 290
L++ D +CR+WD
Sbjct: 344 PYQLLSSSDDGTCRIWD 360
Score = 30.7 bits (66), Expect = 0.62
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +3
Query: 177 ERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN 329
+ + GH ++C +D +ITG D ++W ++T +A+ + +
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 81 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV-DWQSINLIT 257
R + I ++ + + +A D + VW + +G + + GH + +DV + ++
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMS 604
Query: 258 GGGDSSCRLWDLETG 302
G D +WD+ G
Sbjct: 605 AGYDGKTIVWDIWEG 619
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH ++ + ++ + D++ S ++D VW + + TF W L V I
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVH-PEI 302
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNS 332
NL+ G D+ ++ LE + L +S
Sbjct: 303 NLLAAGHDNGMIVFKLERERPAFALSGDS 331
Score = 35.1 bits (77), Expect = 0.029
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH I ++++ E + SA+ D +W + + GH + C +
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 246 NLITGGGDSSCRLWDL 293
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLNGERLGTFNGHGGVIWCLDVDW 236
+L+GH R + ++ L+ S A D + +W + T GH + +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLK 323
+ +++ D S R+WD I T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGIQTFR 287
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH---GGVIWCLDVD 233
+L+GH+ ++ + ++ LLF+ + D + +W ++ + + H GV+
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASP 71
Query: 234 WQSIN-LITGGGDSSCRLWDLETG 302
W + +I+ G D + + WD+E G
Sbjct: 72 WLGEDKIISQGRDGTVKCWDIEDG 95
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH+ I +K++ + L S D+K VW + + + F H + +
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 246 NLITGGG---DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
L+ GG D R W+ T ++ + +NS V CN +S
Sbjct: 348 GLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV--CNLVWS 387
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 156 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 293
VW +L T GH + L V ++TG GD + R W++
Sbjct: 406 VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 129 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGK 305
S+ DS VW + F GH + +D +L +GG D+ CR+WDL K
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Score = 36.7 bits (81), Expect = 0.009
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +3
Query: 54 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 233
K ++L+GH+ +T + ++ D + A + W +G L TF G
Sbjct: 98 KIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKASSGF------- 150
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSAYQAA 377
DS R+WDL T +NI + + V + +FS + Y A
Sbjct: 151 -----------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 45 LNMKPLM--LQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 215
L M+ L+ + H ++Q+KY +E L +A+ D N+W + + + GH +
Sbjct: 201 LRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 216 WCLDV 230
LD+
Sbjct: 261 ASLDI 265
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L+ QGH + + + ++ G L S +D++ +W + L H ++ + + Q
Sbjct: 166 LIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQ 225
Query: 240 S-INLITGGGDSSCRLWDLETGKNIATLKS 326
L T D + +W +G++ + +KS
Sbjct: 226 ERYFLATASHDMNVNIW---SGRDFSLVKS 252
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 233
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
LITG D + ++WD +T + TL+ ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGD--LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L HQ+ + + Y GD L + + D VW + T GH + + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 240 SINLITGGGDSSCRLWDLET 299
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 224
L GHQ+ +T I D L++A+KD +W +G+ G N GG + C+
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLN-LGGEVGCI 191
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDWQS 242
LQ H I + + L +A+ D +W +++G +L GH +W
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIW-NVDGFKLEKVLTGHQRWVWDCVFSVDG 265
Query: 243 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
L+T D + RLW + GK + + + C
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
Score = 33.5 bits (73), Expect = 0.088
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 221
+L GHQR + ++ +G+ L +A+ D +W G+ + + GH C
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGH-GGVIWCLDVDW- 236
L GH+ + +++N GD+L S + D + +W W +L +GH V + +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 237 QSINLITGGGDSSCRLWD-LETGK 305
+IT G D RL LE GK
Sbjct: 111 DDRTIITSGADGQVRLGQILENGK 134
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 233
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
LITG D + ++WD +T + TL+ ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGD--LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 239
L H + + + Y GD L + + D VW + T GH + + +
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 240 SINLITGGGDSSCRLWDLET 299
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLG--TFNGHGGVIWCLDVDW 236
L GH + +T IK+ + DL+ +A+ D +W S +G T H + + V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 368
+ ++ DS+ +DL +G +A + +++S N++ +A+
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQV-TDASENDVNYTAAAF 362
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +3
Query: 90 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 269
T ++ +G +L + S +W + + F GH G I + L T D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 270 SSCRLWDLETGKNIAT 317
RLWDL KN T
Sbjct: 418 -GVRLWDLRKLKNFRT 432
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 233
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 233
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 233
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 332
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH ++ +K G+ + +AA D +W + T I L+ D +
Sbjct: 935 LKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNS 332
L G D+ +WD+ +GK + LK ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHT 1022
Score = 34.7 bits (76), Expect = 0.038
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH + I +R G ++ S + D VW + L GH + C+ +
Sbjct: 895 LKGHTGTVRAISSDR-GKIV-SGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGE 951
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSS 335
++T D + ++WD+ T +AT+ SS
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSS 981
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L+GH + I I+ D L + + D VW G H G + ++
Sbjct: 1018 LKGHTKWIRSIRMVE--DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 246 NLITGGGDSSCRLWDLETG-----KNIATLKSNS 332
+ITG D R W+ + G KNI TL S+S
Sbjct: 1076 GIITGSADGLLRFWENDEGGIKCVKNI-TLHSSS 1108
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVDW 236
L GH + +T +K+ + DL+ +A+ D +W + T N H + + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 389
+ ++ D + +DL +G +A + +S N Y+A AA+ D
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK----NVDYTA--AAFHPD 364
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +3
Query: 90 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 269
T ++ +G +L + S +W + + F+GH G + + L T D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 270 SSCRLWDLETGKNIATLKS 326
RLWDL +N + S
Sbjct: 417 -GVRLWDLRKLRNFKSFLS 434
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVDW 236
L GH + +T +K+ + DL+ +A+ D +W + T N H + + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 237 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 389
+ ++ D + +DL +G +A + +S N Y+A AA+ D
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK----NVDYTA--AAFHPD 364
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +3
Query: 90 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 269
T ++ +G +L + S +W + + F+GH G + + L T D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 270 SSCRLWDLETGKNIATLKS 326
RLWDL +N + S
Sbjct: 417 -GVRLWDLRKLRNFKSFLS 434
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF---NGHGGVIWCLDVDWQSI 245
H + I+Y+ +G + + D K ++ G+++G +GH G I+ + S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 246 NLITGGGDSSCRLWDLETGKNIATL 320
++T D S ++W++ I ++
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSV 134
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW----CLDVDWQS 242
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 243 IN--LITGGGDSSCRLWDLETG 302
+ LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW----CLDVDWQS 242
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 243 IN--LITGGGDSSCRLWDLETG 302
+ LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.7 bits (81), Expect = 0.009
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLNGER--LGTFNGH-GGVIWCLDVD 233
+ GH A T + YN +LL + +KD +W N E + T N + GG+ +
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSP 424
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVR 341
L GG +LWD + N+++ + VR
Sbjct: 425 DNPFLLAMGGVMGELKLWDTLSDTNVSSRYGSREVR 460
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+ H R + + +G L + D ++W E + F GH + CL + +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 249 LITGGGDSSCRLWDLE 296
L +G D + ++W++E
Sbjct: 279 LYSGSFDRTVKVWNVE 294
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD-VDWQS 242
L GH+ + +K++ + L S D++ VW + + + + H + + QS
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 243 INLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
L +GGG D R W+ G + ++ + S V CN ++S
Sbjct: 354 SLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQV--CNLAWS 393
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/97 (19%), Positives = 34/97 (35%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
G ++ +++ REG + + VW +R+ T GH L W S L
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVL--AWNSRIL 270
Query: 252 ITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
+G D + D+ + + C +S
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWS 307
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 156 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 293
+W + ++ T GH + L ++TG GD + R W++
Sbjct: 412 LWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 183 LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
L + GH G + C V Q L +G D + ++WDL T + I TLK ++ T
Sbjct: 251 LTSLEGHSGEVTCFAVGGQM--LYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVT 302
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 198 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 302
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 245
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 246 NLITGGGDSSCRLWDLETGKNI 311
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
LQGH + + + E + + SA++D + VW +L ++ +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 246 NLITGGGDSSCRLWDLET 299
++ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 189 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSA 365
T GH G ++ LD + +++ D +W+ T + +K + V TC FS +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 366 YQAA 377
A
Sbjct: 120 QSVA 123
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 198 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 302
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 92 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 245
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 246 NLITGGGDSSCRLWDLETGKNI 311
TG D +CRL+D+ TG +
Sbjct: 200 RFGTGSDDGTCRLYDIRTGHQL 221
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSA-AKDSKPNVWWSLNGE---RLGTF-NGHGGVIWCLDVDW 236
G +T I ++ G LLF+ A ++ VW +L GE LG + H I CL +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 289
Query: 237 QSINLITGGGDSSCRLW 287
L TG DS+ ++W
Sbjct: 290 DGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 198 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 302
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 245
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 246 NLITGGGDSSCRLWDLETGKNI 311
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSA-AKDSKPNVWWSLNGE---RLGTF-NGHGGVIWCLDVDW 236
G +T I ++ G LLF+ A ++ VW +L GE LG + H I CL +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 351
Query: 237 QSINLITGGGDSSCRLW 287
L TG DS+ ++W
Sbjct: 352 DGSALCTGSWDSNLKIW 368
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
LQGH + + + E + + SA++D + VW +L ++ +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 246 NLITGGGDSSCRLWDLET 299
++ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 189 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSA 365
T GH G ++ LD + +++ D +W+ T + +K + V TC FS +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 366 YQAA 377
A
Sbjct: 120 QSVA 123
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.9 bits (79), Expect = 0.017
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL---------NGERL--GTFNGHGGVIW 218
GH R++T + ++ + LL S ++D VW + G L FN H +
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 219 CLDVDWQSIN--LITGGGDSSCRLWDLETGK 305
+ +D+ N +I+ D +C++W L GK
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Score = 34.7 bits (76), Expect = 0.038
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +3
Query: 87 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 266
I + N EG L +W G+ L ++GH + CL L++G
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 267 DSSCRLWDL 293
D S R+W L
Sbjct: 141 DGSIRVWSL 149
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 35.9 bits (79), Expect = 0.017
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +3
Query: 51 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLD 227
+K L G Q A+ +N EG +L + A+D V+ W L H V CL
Sbjct: 147 IKELRDVGQQLALA---FNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVK-CLT 202
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKNIATL--KSNSSVRTCNFS 356
L++ GG CR+WD+ +A+L + + +C FS
Sbjct: 203 FSESGQFLVSLGGPV-CRVWDVNASAAVASLSKEKDEMFASCRFS 246
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.5 bits (78), Expect = 0.022
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNGER--LGTFNGHGGVI----WC 221
GH + +K++ G L S D+ ++W S N R L F H + WC
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 222 LDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
+Q+ L TGGG D W+ TG + ++++ S V C+ +S
Sbjct: 294 ---PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV--CSLLWS 337
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSK-PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
GH+ + + +N +L + D K N + +GT+ GH + L
Sbjct: 193 GHESRVGSLAWNNH--ILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKK 250
Query: 249 LITGGGDSSCRLWD 290
L +GG D+ +WD
Sbjct: 251 LASGGNDNVVHIWD 264
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.5 bits (78), Expect = 0.022
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVW-----WSLNGER--LGTFNGHGGVI----W 218
GH + +K++ G L S D+ ++W S N R L F H + W
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 219 CLDVDWQSINLITGG--GDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
C +Q+ L TGG GD + W+ TG + ++++ S V C+ +S
Sbjct: 276 C---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV--CSLLWS 320
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 249 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 353
+ TG DSS ++DL +G +A LK +SS VR CN+
Sbjct: 416 IYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW 451
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 150 PNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSINLITGGGDSSCRLWDLETGKNIATLKS 326
P +SL+ + + +F GH + LD+ W +S L++ D + RLWD+ET +
Sbjct: 501 PETVFSLSDKPICSFTGHLDDV--LDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAH 558
Query: 327 NSSVRTCNFS 356
N V F+
Sbjct: 559 NDYVTCVQFN 568
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 161
+Q HQ I +K++ + LL SA +D +VW
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 84 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGG 263
++ + +G LL ++ + S +G+ + + GH + + L TG
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 264 GDSSCRLWDLET-GKNIATLKSN-SSVRTCNFS 356
D++CRLWD+ ++ A LK N ++R F+
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFT 342
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVD 233
+L H+ + ++++ G L +A+ D +W L+ ++ T H + +
Sbjct: 219 ILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS 278
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 335
L+T G +LWD++TG T +N++
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNT 312
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +3
Query: 54 KPLMLQGHQRAITQIKY---NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 224
+PL GH+++ I+ + + S ++DS+ +W N + L +GH + C
Sbjct: 432 QPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNC- 490
Query: 225 DVDWQSIN---LITGGGDSSCRLW 287
V W N L + D + R+W
Sbjct: 491 -VSWNPKNPRMLASASDDQTIRIW 513
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 34.3 bits (75), Expect = 0.050
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGER-----LGTFNGHGGVI----WC 221
GH + +K++ G+ S D+ ++W SL + L F H + WC
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 222 LDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
+Q+ L TGGG D + W+ TG + ++++ S V + +S S
Sbjct: 310 ---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQS 355
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER----LGTF----NGHGGVIW 218
+L GH + + ++ D+LFS + D+ +W S + + + T NGH +W
Sbjct: 134 VLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVW 193
Query: 219 CLDVDWQSINLITGGGDSSCRLWDLETGK 305
+ + ++T D + ++W + +
Sbjct: 194 SISFNAAGDKMVTCSDDLAVKIWKTDISR 222
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW--------WSLN-GERLGTFNGHGGVI 215
L+GH + + +N D ++ S + D +W W+ G RLG+F+G+ V
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 216 WCLDVDWQSINLITG-GGDSSCRLWDLETGKNIATLKSNSSV 338
D +S++++ G + W+ +G +AT + SV
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWN-ASGSLLATCGRDKSV 116
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH+ + +K++ + L S D++ VW + + + ++ H + +
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 246 NLITGGG---DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
L+ GG D R W+ T +++++ + S V CN ++S
Sbjct: 391 GLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQV--CNLAWS 430
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 156 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 293
VW ++ T GH + L V ++TG GD + R W++
Sbjct: 449 VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 34.3 bits (75), Expect = 0.050
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 174 GERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTC 347
G+ L T +GH + TG D +CR+WD+ K++A L+ N ++R+
Sbjct: 307 GKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSI 366
Query: 348 NFS 356
++
Sbjct: 367 RYT 369
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.3 bits (75), Expect = 0.050
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 201 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKN 308
H G + L + L++ G DS RLWD+E+G+N
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVW 161
H A+T +K +G L SA DS+ +W
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLW 339
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 129 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LITGGGDSSCRLWDLE 296
S ++DS+ +W G+ + GH G + C V W N L + D + R+W L+
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNC--VSWSPTNLHMLASASDDGTIRIWGLD 562
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 33.9 bits (74), Expect = 0.067
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNG-HGGVIWCLDVDWQS 242
L+GH IT + YN + + L S + V +G R +G V+ LD S
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 243 INL-ITGGGDSSCRLWDLETGKN--IATLKSNSS 335
+L +T G D + LWD TG++ ++ LK +S+
Sbjct: 191 RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSA 223
Score = 33.1 bits (72), Expect = 0.12
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Frame = +3
Query: 84 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-----NGHGGVIWCLD-VDWQ-- 239
A+ +K+N ++ S +D K ++W NG+ LGT +G CL + +
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRK-NGQSLGTVPVTGKDGGDSAEECLSAISFSKK 103
Query: 240 -SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
S + +GG ++WDL+ I LK ++S T
Sbjct: 104 GSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTIT 139
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.9 bits (74), Expect = 0.067
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG-DSSCRLWDLETGKNIATLKS 326
P +S + + + + GH I LD+ W L+ D + RLWD+ET K L +
Sbjct: 488 PETVFSFSDKPVCSLKGHLDAI--LDLSWSKSQLLLSSSMDKTVRLWDIET-KTCLKLFA 544
Query: 327 NSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDE 446
++ TC +S Y ++ ++ I R + E
Sbjct: 545 HNDYVTC-IQFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 156 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS-SCRLWDLETGKNIATLKSNS 332
VW + + H +W +D L+ G D S +LW + G +I T+K+ +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 333 SVRTCNF 353
++ F
Sbjct: 620 NICCVQF 626
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 156 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS-SCRLWDLETGKNIATLKSNS 332
VW + + H +W +D L+ G D S +LW + G +I T+K+ +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 333 SVRTCNF 353
++ F
Sbjct: 620 NICCVQF 626
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 242
G AI Q++Y+ G + +A+KD ++ ++ + +G +G V + Q
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 243 INLITGGGDSSCRLWDLETGKNI 311
+++ G DS+ +LW++ +G+ +
Sbjct: 232 F-VLSSGKDSTVKLWEIGSGRMV 253
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 242
G AI Q++Y+ G + +A+KD ++ ++ + +G +G V + Q
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 243 INLITGGGDSSCRLWDLETGKNI 311
+++ G DS+ +LW++ +G+ +
Sbjct: 324 F-VLSSGKDSTVKLWEIGSGRMV 345
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-NGHGGVIWCLDVDWQSINL 251
H A++ + +R+G LL+S + D +W + + + L +F N H I + + ++ ++
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS-ENGDI 222
Query: 252 ITGGGDSSCRLW 287
TG D ++W
Sbjct: 223 YTGSSDQRIKVW 234
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 33.5 bits (73), Expect = 0.088
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 192 FNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGK 305
+ GH G + + D + +G D S R+W++ETG+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 33.5 bits (73), Expect = 0.088
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW----SLNG-ERLGTFN-GHGGVIWC 221
L+L + IT ++++ +G + SA +D K V L G + +F GH I C
Sbjct: 149 LLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITC 208
Query: 222 LD-VDWQSIN---LITGGGDSSCRLWDLETGKNIAT 317
V + L++G GDS+ RLWD+ +G + T
Sbjct: 209 TAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLLDT 244
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = +3
Query: 48 NMKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE-----RL--GTFNGH 203
NM+ L +L G + +T ++++++G+ L++ + + W + +L T N +
Sbjct: 244 NMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTN 303
Query: 204 GGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 368
V + D++ +L TGG D ++DL+TG ++ ++ S FS+ Y
Sbjct: 304 QRVFF--DIEPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNA-FSFHPY 355
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 114 GDLLFSAAKDSKPNVWW-SLNGE--RLGTFNGHGGVIWCLDVDWQSIN----LITGGGDS 272
G+++ S + D +W + G + G +GH G + CL ++ L +GG D
Sbjct: 328 GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDK 387
Query: 273 SCRLWDLETGKNIATLKSN 329
S R+W + N+ KS+
Sbjct: 388 SLRVWWVPKQDNLEEKKSS 406
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 174 GERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTC 347
G+ L T +GH + + TG D +CR+WD+ +++ LK N ++R+
Sbjct: 309 GKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSI 368
Query: 348 NFS 356
++
Sbjct: 369 RYT 371
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 32.7 bits (71), Expect = 0.15
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 150 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
P++ L +++ + +GH G +W ++ D + L + G D +LW
Sbjct: 262 PDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWS-LNGE 179
L GHQ + Q++++ G L S D +W S LNGE
Sbjct: 276 LSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGE 314
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 254
H AI I + + L +A+ D VW + G GH G + + + +L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 255 TGGGDSSC-RLWDL 293
G C LWDL
Sbjct: 187 VSGSRDGCFALWDL 200
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +3
Query: 78 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLIT 257
Q AI I ++ +G L + +D ++ + + + G + C L+T
Sbjct: 303 QGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLT 362
Query: 258 GGGDSSCRLWDLETGKNIATLKSNSS 335
GG D ++W +E K +A + ++S
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNS 388
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 201 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKN 308
H GV+ L + L++ G S RLWD+E+G+N
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRN 346
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DVDWQ 239
L GH++ ++ I D L++ +KD VW +G+ G GG I C+ + W
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK-LGGEIGCVLSEGPWL 205
Query: 240 SINLITGGGDSSCRLWDLET 299
+ G + + W++ET
Sbjct: 206 LV-----GMPNLVKAWNIET 220
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 183 LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSV 338
L +GH ++ + + S L TG D + R+WD +G+ LK +
Sbjct: 144 LTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEI 195
Score = 27.1 bits (57), Expect = 7.7
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +3
Query: 117 DLLFSAAKDSKPNVWWSLNG-----ERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCR 281
DLLF+ +D + W N E + GH + L V + L +G D + +
Sbjct: 241 DLLFAGTQDGSI-LAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIK 297
Query: 282 LWDLETGKNIATLKSNSSV 338
+W L+ + I TL +SSV
Sbjct: 298 VWSLDNLQCIQTLTDHSSV 316
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 31.9 bits (69), Expect = 0.27
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNG--ERLGTFNGHGGVI----W 218
+GH + + +K++ G L S D+ ++W S N + L H + W
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Query: 219 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
C +Q+ L TGGG D + + W+ TG + ++ + S V C+ +S
Sbjct: 323 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV--CSLLWS 367
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 31.9 bits (69), Expect = 0.27
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNG--ERLGTFNGHGGVI----W 218
+GH + + +K++ G L S D+ ++W S N + L H + W
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Query: 219 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
C +Q+ L TGGG D + + W+ TG + ++ + S V C+ +S
Sbjct: 313 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV--CSLLWS 357
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 78 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLIT 257
Q +I I ++ +G L + +D ++ L + + + G + C ++T
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILT 362
Query: 258 GGGDSSCRLWDLETGKNIATLKSNSS 335
GG D ++W +E K +A + ++S
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNS 388
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 69 QGHQRAITQIKYNREG----DLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWCLDVD 233
+GH + QI ++ + +L S + D W + + +++ + G+ I+
Sbjct: 80 KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYG 139
Query: 234 WQSINLITGGGDSSCRLWDLETGKNIATLKSN 329
+ NL+ GG LWD K +A L+ +
Sbjct: 140 GAADNLLAGGCKEQVLLWDWRNSKQVACLEES 171
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERL----GTFNGHGGVIWCLDVD 233
L+ H+ A+ + N +G +LFS + D VW + G GH I L +
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI--LSLF 333
Query: 234 WQSINLITGGGDSSCRLW 287
S L++G D + R+W
Sbjct: 334 NVSDLLLSGSADRTVRIW 351
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 188
+Q H+ +I IK++ +G L SA +D +W + ER G
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKG 399
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 204 GGVIWCLDVDWQSINLITGGG-DSSCRLWDLETGKNIATLK 323
G ++ L +W++ N++ G D ++WD+ TGK T++
Sbjct: 214 GQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTME 254
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDVDWQSI 245
H + +++ +G + + D K ++ E LG + GH G I+ +
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 246 NLITGGGDSSCRLWDL 293
++T D S ++WD+
Sbjct: 246 QVLTVSADKSAKIWDI 261
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 63 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE-RLGTFNGHGGVIWCLDVDWQ 239
+L+ H+ AI+ I+Y+ + + SA + + VW ++ E +L H I CL
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 240 SINLITGGGDSSCRLWDLE 296
S + TG D+ +++++
Sbjct: 546 STMVATGSLDTCVIVYEVD 564
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 123 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 293
+FSA+ D +W + + F GH G + L L++ G D + RLW++
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 81 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 260
R+ + I +G+++ D+ + S + L T GH + CL + + L+TG
Sbjct: 2627 RSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTG 2686
Query: 261 GGDSSCRLWDLETGKNIATLKSNSS 335
DS+ LW + T S S
Sbjct: 2687 SRDSTVLLWRIHKAFTSRTSVSEPS 2711
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 249 LITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTCNFS 356
L TG D++CRLWD+ +++ LK N ++R F+
Sbjct: 334 LATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 182
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 182
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 207 GVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAY 368
GVI C+ + + L G D C +WD ET ++ N S + S+S Y
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKY 78
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +3
Query: 96 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN--LITGGGD 269
+ +N G LL + D +W + V W L+ D
Sbjct: 29 VAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAAD 88
Query: 270 SSCRLWDLETGKNIA 314
S LWD+ TG+ IA
Sbjct: 89 KSLTLWDVSTGEKIA 103
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 188
+Q H +I IK++ +G L SA +D ++W + E+ G
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKG 449
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 30.3 bits (65), Expect = 0.82
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Frame = +3
Query: 72 GHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGER-----LGTFNGHGGVI----W 218
GH + +K++ G L S + ++W S+ + L F H + W
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 219 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 362
C +Q+ L TGGG D + W+ TG + ++++ S V C+ +S
Sbjct: 307 C---PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV--CSLLWS 351
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 30.3 bits (65), Expect = 0.82
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSINL 251
H + + + +G +FS D + +W L+G + T H G I + W +NL
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM--AWIPGMNL 128
Query: 252 I-TGGGDSSCRLWD 290
+ TG D + + WD
Sbjct: 129 LATGSWDKTLKYWD 142
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 168 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
++G+RL N + L QS NL+ DS RL+D+E+ L S +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 348 NF 353
F
Sbjct: 61 CF 62
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 168 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
++G+RL N + L QS NL+ DS RL+D+E+ L S +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 348 NF 353
F
Sbjct: 61 CF 62
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 195 NGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
NGH G IW L L TGG D ++W
Sbjct: 195 NGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 171 NGERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
N E + + GH +W D + NL+ TG D WD+ + NS V T
Sbjct: 152 NLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHT 210
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +3
Query: 168 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
L+ + G + G W D +N + G+SS + WDL T K + +++ ++ VR
Sbjct: 160 LSKDSAGMLHSLSGGAW----DPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAHVRGV 214
Query: 348 NFSYSAYQAAYTTDKAMG 401
+++ T + G
Sbjct: 215 DYNPKREHILVTAEDESG 232
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 96 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV-IWCLDVDW--QSINLITGGG 266
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 211 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 270
Query: 267 DSSCRLWDLETGKNI 311
D S W + +GK +
Sbjct: 271 DGSTHAWGVRSGKQV 285
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 96 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV-IWCLDVDW--QSINLITGGG 266
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 208 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 267
Query: 267 DSSCRLWDLETGKNI 311
D S W + +GK +
Sbjct: 268 DGSTHAWGVRSGKQV 282
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL- 251
H + +K++++G L S D ++ G +F V+ + + N+
Sbjct: 204 HNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHPDNCNVF 262
Query: 252 ITGGGDSSCRLWDLETGK 305
++GG S RLWD+ K
Sbjct: 263 LSGGSKGSLRLWDIRANK 280
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 228 VDWQSINLITGGGDSSCRLWDLETGKN 308
+ W+ +ITGG DS LWD G++
Sbjct: 157 IPWRPWEVITGGLDSKLVLWDFSKGRS 183
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 265 PPPVMRLIDCQSTSRHHITPPWPLKVPRRSPFS 167
PPP ++ Q RHH PP P P RSP S
Sbjct: 118 PPPPSTAVEYQPHHRHHPPPP-PPPPPPRSPNS 149
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 60 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 161
+ L+GH+ A+T + ++ + + +A+KD VW
Sbjct: 283 MQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 246 NLITGGGDSSCRLWDLETGKNIATLKSNSSV 338
++ TG GD++ + W L+ G + T+ + SV
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSV 629
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 96 IKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS 272
+ +N++G +L + A+D V+ W L H V L +S + G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFS-ESGKFLVSLGAP 205
Query: 273 SCRLWDLETGKNIATL--KSNSSVRTCNFS 356
CR+WD+ IA+L + + +C FS
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 96 IKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS 272
+ +N++G +L + A+D V+ W L H V L +S + G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFS-ESGKFLVSLGAP 205
Query: 273 SCRLWDLETGKNIATL--KSNSSVRTCNFS 356
CR+WD+ IA+L + + +C FS
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 249 LITGGGDSSCRLWDLETGKNIATLK 323
+ T G DS R+WD+E G +IA K
Sbjct: 177 VFTSGYDSIVRMWDMEEGLSIAASK 201
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 245
L GH A+ + L+F++ DS +W G + G I L D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKL- 216
Query: 246 NLITGGGDSSCRLW-DLETGKNIATLKSNSSVRT 344
L+ GG D W L+ +N+ L +T
Sbjct: 217 -LVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKT 249
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 174 GERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
GE + + GH + V W ++I + D S R WD+ETGK+ L ++ T
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNT 317
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 174 GERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 344
GE + + GH + V W ++I + D S R WD+ETGK+ L ++ T
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNT 317
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 75 HQRAITQIKYNREGDL-LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 251
H I+ K+++ L SA+ D K +W L + H + D W+ ++
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESV 415
Query: 252 ITGGGDSSCRL 284
++GG DS+ R+
Sbjct: 416 VSGGADSNLRI 426
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 84 AITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDVDWQSINLITG 260
A+T I ++ L++ + D N W N + G GH + CL + +G
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNL--MFSG 359
Query: 261 GGDSSCRLW 287
D R+W
Sbjct: 360 SADLGIRVW 368
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 LGTFNGHGGVIWCLDVD-WQSINLITGGGDSSCRLWDLETGKNIATLKSN 329
LG + G + W D + L++G D+ +W+L G+NI TLK +
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 123 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
L S + D+ VW +NGE + T GH + + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 117 DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
DL F +A W+L+GE L GH +++ +D + +++ D ++W
Sbjct: 201 DLGFLSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHSSGL-IVSASEDRHAKIW 256
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 LGTFNGHGGVIWCLDVD-WQSINLITGGGDSSCRLWDLETGKNIATLKSN 329
LG + G + W D + L++G D+ +W+L G+NI TLK +
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 123 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
L S + D+ VW +NGE + T GH + + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 117 DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
DL F +A W+L+GE L GH +++ +D + +++ D ++W
Sbjct: 201 DLGFLSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHSSGL-IVSASEDRHAKIW 256
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 176
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 66 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 176
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +3
Query: 114 GDLLFSAAKDSKPNVWWSLNGER--LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 287
G LLFS A D K VW + GH G + CL V S GGD L+
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 288 DLETGKNI 311
K++
Sbjct: 336 SGSLDKSV 343
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 222 LDVDWQSIN--LITGGGDSSCRLWDLETG 302
LD+ W + LI+G D+SC +WD+ G
Sbjct: 57 LDLQWSPDDAYLISGSVDNSCIIWDVNKG 85
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 48 NMKPLM-LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 224
N K +M L+GH + + ++ + +L S + D+ ++W G GH ++
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV--K 164
Query: 225 DVDWQSIN--LITGGGDSSCRLW 287
V W I + + D + +W
Sbjct: 165 GVTWDPIGSFIASQSDDKTVIIW 187
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD-WQS 242
+GH+ AI + ++ + + LF SA +D + +W + + H + L + +
Sbjct: 214 EGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNE 273
Query: 243 INLITGGGDSSCRLWDL 293
L T DS+ L+DL
Sbjct: 274 WVLATASSDSTVALFDL 290
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +3
Query: 81 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 260
R+ ++ +G L S D + G+ L GH W + + ++
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 261 GG-DSSCRLWDLETGKNIAT 317
G D RLW+ +TG+ I T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +3
Query: 81 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 260
R+ ++ +G L S D + G+ L GH W + + ++
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 261 GG-DSSCRLWDLETGKNIAT 317
G D RLW+ +TG+ I T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At5g23070.1 68418.m02697 thymidine kinase, putative similar to
thymidine kinase [Oryza sativa] SWISS-PROT:O81263
Length = 282
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 282 LWDLETGKNIATLKSNSSVRTCNFS 356
L + ETGK IA +KSN R C S
Sbjct: 99 LAERETGKRIAIIKSNKDTRYCTES 123
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +3
Query: 186 GTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSA 365
G N H + + +D + I ++GG D R+W +++G+ ++ K ++SV + +SA
Sbjct: 384 GHVNSHTPIEFGIDPSERFI--LSGGDDCYTRIWSIKSGQLMSENKFSNSVPSV-VCWSA 440
Query: 366 YQAAYTTDKAMGH 404
+ ++GH
Sbjct: 441 DERQRDRKDSIGH 453
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 249 LITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 347
+++G GD + W++E +A ++N V +C
Sbjct: 259 VLSGSGDGTLHAWNIENPSEVARWENNIGVVSC 291
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 207 GVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN 329
G I+ + VD S ++T G D ++D+E+GK + + K +
Sbjct: 527 GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQD 567
>At4g13630.1 68417.m02121 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 581
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 346 HVLTEELDLSVAIFLPVSRSHNLQELSPPPVMRLIDCQSTSRHHITPPW 200
H L +E+D +FL + HN + P + RL + IT PW
Sbjct: 320 HFLEKEVDTYRQMFLETEQPHNTPDSKPAQIERL-----QTPQQITEPW 363
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 249 LITGGGDSSCRLWDLETGKNI 311
LI+G D + R+WDLE+G I
Sbjct: 552 LISGSMDCTIRIWDLESGNVI 572
>At3g04660.1 68416.m00499 F-box family protein contains F-box domain
Pfam:PF00646
Length = 390
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 301 PVSRSHNLQELSPPPVMRLIDCQSTSRHH 215
P++ H + L P R+++C+ RHH
Sbjct: 193 PMTEEHQVFTLGPKQKWRMLECKYLHRHH 221
>At2g25800.1 68415.m03096 expressed protein
Length = 996
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 310 IFLPVSRSHNLQELSPPPVMRLIDCQSTSRHHITPPWPL 194
+F +S H+ +E +PPP +S+S PP PL
Sbjct: 4 LFRELSLGHSKRESTPPPPSHSATSRSSSMSSDLPPSPL 42
>At5g54230.1 68418.m06755 myb family transcription factor (MYB49)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 319
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 126 FSAAKDSKPNVWWSLNGERLGTFNGHGG 209
F+ +S P V W NGE LG ++ + G
Sbjct: 199 FTGLLNSTPPVQWQNNGEYLGDYHSYTG 226
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = +3
Query: 120 LLFSAAKDSKPNVWWSLNGER-----LGTFNGH-GGVIWCLDVDWQSINLITGGGDSSCR 281
+LF+ VW + + E L + GH G + C V + L +G D + +
Sbjct: 278 MLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEV--LYSGSVDKTIK 335
Query: 282 LWDLETGKNIATLKSN 329
+WDL T + TLK +
Sbjct: 336 VWDLNTLQCRMTLKQH 351
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 69 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 248
+GHQ I + ++ + + +F +A D V W L ++ H + ++++ S N
Sbjct: 215 EGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQM----QHQVKVHEREINYLSFN 270
Query: 249 ------LITGGGDSSCRLWDL 293
L T DS+ L+DL
Sbjct: 271 PFNEWVLATASSDSTVALFDL 291
>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 1322
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 138 KDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 260
K + WW G+ G G I D DW+ +N + G
Sbjct: 380 KQQAKSSWWPFGGKS-EVSGGEGESIQFTDEDWERLNKVIG 419
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,164,420
Number of Sequences: 28952
Number of extensions: 270438
Number of successful extensions: 1337
Number of sequences better than 10.0: 164
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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