BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E01f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 87 5e-18 L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 87 5e-18 AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 56 1e-08 AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 56 1e-08 Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 54 8e-08 AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 51 4e-07 Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 50 8e-07 Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 38 0.004 Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 38 0.004 X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 38 0.004 AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 38 0.004 U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.013 Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 36 0.018 AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.094 U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 33 0.12 M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 32 0.22 M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 32 0.22 AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 32 0.22 AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 32 0.22 Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.66 AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 30 1.2 AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 2.7 U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 27 8.1 AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 27 8.1 AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium chann... 27 8.1 >U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light chain protein 3, isoforma protein. Length = 153 Score = 87.4 bits (207), Expect = 5e-18 Identities = 43/83 (51%), Positives = 55/83 (66%) Frame = +2 Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184 LP+Y Q K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K Sbjct: 67 LPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLK 126 Query: 185 DCMDPEDDDGMIPYAAFLKKVMA 253 ED +GM+ Y F+KKV+A Sbjct: 127 GV---EDGEGMVKYEDFIKKVLA 146 >L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin light chain protein. Length = 153 Score = 87.4 bits (207), Expect = 5e-18 Identities = 43/83 (51%), Positives = 55/83 (66%) Frame = +2 Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184 LP+Y Q K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K Sbjct: 67 LPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLK 126 Query: 185 DCMDPEDDDGMIPYAAFLKKVMA 253 ED +GM+ Y F+KKV+A Sbjct: 127 GV---EDGEGMVKYEDFIKKVLA 146 >AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin protein. Length = 149 Score = 56.4 bits (130), Expect = 1e-08 Identities = 28/72 (38%), Positives = 42/72 (58%) Frame = +2 Query: 23 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 202 A+K KD + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++ Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131 Query: 203 DDDGMIPYAAFL 238 D DG + Y F+ Sbjct: 132 DGDGQVNYEEFV 143 Score = 30.7 bits (66), Expect = 0.66 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = +2 Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 +F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69 Query: 236 L 238 L Sbjct: 70 L 70 >AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin protein 1 protein. Length = 149 Score = 56.4 bits (130), Expect = 1e-08 Identities = 28/72 (38%), Positives = 42/72 (58%) Frame = +2 Query: 23 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 202 A+K KD + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++ Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131 Query: 203 DDDGMIPYAAFL 238 D DG + Y F+ Sbjct: 132 DGDGQVNYEEFV 143 Score = 30.7 bits (66), Expect = 0.66 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = +2 Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 +F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69 Query: 236 L 238 L Sbjct: 70 L 70 >Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical protein T12D8.6 protein. Length = 142 Score = 53.6 bits (123), Expect = 8e-08 Identities = 27/82 (32%), Positives = 46/82 (56%) Frame = +2 Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184 +PI+ K++++ E+F+E L +DK NG++ AEL H L LGE+L D +V ++ Sbjct: 62 VPIFQSVSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLS 121 Query: 185 DCMDPEDDDGMIPYAAFLKKVM 250 D G + + F++ VM Sbjct: 122 ---GHNDSHGNVNISDFVRAVM 140 >AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical protein Y73B3A.12 protein. Length = 116 Score = 51.2 bits (117), Expect = 4e-07 Identities = 27/71 (38%), Positives = 40/71 (56%) Frame = +2 Query: 23 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 202 A+K K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++ Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 80 Query: 203 DDDGMIPYAAF 235 D DG I +F Sbjct: 81 DGDGQIMRVSF 91 >Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical protein K04C1.4 protein. Length = 143 Score = 50.4 bits (115), Expect = 8e-07 Identities = 26/82 (31%), Positives = 43/82 (52%) Frame = +2 Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184 LP+ S + +K + EDF++ L +DK G + AEL L +G+KL D E ++ Sbjct: 65 LPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVA 124 Query: 185 DCMDPEDDDGMIPYAAFLKKVM 250 ++D+G I F+K +M Sbjct: 125 G----QEDNGKIKIETFVKTIM 142 >Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical protein C13C12.1 protein. Length = 218 Score = 37.9 bits (84), Expect = 0.004 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = +2 Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 241 E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K Sbjct: 157 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 213 Score = 32.7 bits (71), Expect = 0.16 Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +2 Query: 53 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 232 ++F E ++DK+ NG + EL + +LG+ + E+ E+ + D +G I + Sbjct: 81 DEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEV--DIDGNGQIEFPE 138 Query: 233 F---LKKVMA*KTSQLV 274 F +K++M S+++ Sbjct: 139 FCVMMKRMMKETDSEMI 155 >Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical protein ZK673.7 protein. Length = 160 Score = 37.9 bits (84), Expect = 0.004 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +2 Query: 32 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 211 + D+G E+ E +LYDK NG + ++L L AL + + + E+ E+ + D Sbjct: 88 ENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEI--DADGS 145 Query: 212 GMIPYAAFLK 241 G + + F++ Sbjct: 146 GTVDFDEFME 155 >X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. Length = 161 Score = 37.9 bits (84), Expect = 0.004 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = +2 Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 241 E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K Sbjct: 100 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 156 Score = 32.7 bits (71), Expect = 0.16 Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +2 Query: 53 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 232 ++F E ++DK+ NG + EL + +LG+ + E+ E+ + D +G I + Sbjct: 24 DEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEV--DIDGNGQIEFPE 81 Query: 233 F---LKKVMA*KTSQLV 274 F +K++M S+++ Sbjct: 82 FCVMMKRMMKETDSEMI 98 >AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C protein. Length = 160 Score = 37.9 bits (84), Expect = 0.004 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +2 Query: 32 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 211 + D+G E+ E +LYDK NG + ++L L AL + + + E+ E+ + D Sbjct: 88 ENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEI--DADGS 145 Query: 212 GMIPYAAFLK 241 G + + F++ Sbjct: 146 GTVDFDEFME 155 >U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical protein F12A10.5 protein. Length = 145 Score = 36.3 bits (80), Expect = 0.013 Identities = 19/58 (32%), Positives = 32/58 (55%) Frame = +2 Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 238 + ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+ Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139 Score = 30.3 bits (65), Expect = 0.87 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +2 Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 238 E + +DKN +G + EL LL LGEK +S++ + + D +G I FL Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66 >Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical protein T07G12.1 protein. Length = 182 Score = 35.9 bits (79), Expect = 0.018 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = +2 Query: 74 KLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 211 K++DK+ NG + E H + +GE+ + EV E+ ++ +D + D+ Sbjct: 102 KVFDKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIRE-VDKDGDE 146 Score = 33.5 bits (73), Expect = 0.094 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +2 Query: 53 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 232 ++F + KL+DK+ N M EL + LG + E+ + + D +G I + Sbjct: 23 QEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEY--DVDGNGKIDFGE 80 Query: 233 FLK--KVMA*KTSQLVISLVIRSF 298 F K K M +T Q +I L + F Sbjct: 81 FCKMMKEMNKETDQELIRLAFKVF 104 >AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical protein F08B6.3 protein. Length = 301 Score = 33.5 bits (73), Expect = 0.094 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = +2 Query: 77 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 241 +YDKN++G + G ELT LL G E + + D D DG + Y +K Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275 >U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related genes protein 3 protein. Length = 164 Score = 33.1 bits (72), Expect = 0.12 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +2 Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 +F E L+DK+ NG + EL + ALG+ + ++ E+ D D +G + + F Sbjct: 30 EFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDV--DLDGNGQVEFPEF 87 Query: 236 ---LKKVMA*KTSQLV 274 +K++M S+++ Sbjct: 88 CVMMKRIMKETDSEMI 103 >M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain 2 protein. Length = 170 Score = 32.3 bits (70), Expect = 0.22 Identities = 13/54 (24%), Positives = 30/54 (55%) Frame = +2 Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199 DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75 >M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain 1 protein. Length = 170 Score = 32.3 bits (70), Expect = 0.22 Identities = 13/54 (24%), Positives = 30/54 (55%) Frame = +2 Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199 DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75 >AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light chain protein 1 protein. Length = 170 Score = 32.3 bits (70), Expect = 0.22 Identities = 13/54 (24%), Positives = 30/54 (55%) Frame = +2 Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199 DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75 >AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light chain protein 2 protein. Length = 170 Score = 32.3 bits (70), Expect = 0.22 Identities = 13/54 (24%), Positives = 30/54 (55%) Frame = +2 Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199 DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75 >Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical protein E02A10.3 protein. Length = 202 Score = 30.7 bits (66), Expect = 0.66 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +2 Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 EC ++D++ENG + + L LG+ D+ + E+ + D +G+I Y F Sbjct: 134 ECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEA--DVDGNGVIDYDEF 188 >AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily assigned gene nameprotein 123 protein. Length = 655 Score = 29.9 bits (64), Expect = 1.2 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 406 QPARAPSHVDIPYNILDTDKPPFLYEQHNINCFCT 510 + A PS++ + N LD+D+ YE H+ + FCT Sbjct: 37 EKANCPSNISLYVNHLDSDRSVIPYEYHSFD-FCT 70 >AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical protein Y51H1A.7 protein. Length = 354 Score = 28.7 bits (61), Expect = 2.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 408 LRAPPEELSPPRALPAPVPQSRASV 334 LRAP EE PP A APVP ++ Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235 >U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical protein T09B4.4 protein. Length = 142 Score = 27.5 bits (58), Expect = 6.2 Identities = 15/64 (23%), Positives = 32/64 (50%) Frame = +2 Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 + ++ L D+N+ M EL L +GE++ E+ K + + +GM+P+ A Sbjct: 81 EIIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEI----KYLLSKVEVNGMVPHQAL 136 Query: 236 LKKV 247 ++ + Sbjct: 137 IEYI 140 >Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical protein C18E9.1 protein. Length = 171 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/60 (23%), Positives = 29/60 (48%) Frame = +2 Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 ++ +L+DK+ NG + EL + +LG+ + E+ ++ + D G I + F Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEV--DIDGSGTIDFGEF 93 >AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like protein protein. Length = 171 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/60 (23%), Positives = 29/60 (48%) Frame = +2 Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235 ++ +L+DK+ NG + EL + +LG+ + E+ ++ + D G I + F Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEV--DIDGSGTIDFGEF 93 >AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium channel, beta subunit protein1 protein. Length = 526 Score = 27.1 bits (57), Expect = 8.1 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 423 GSAGWLRAPPEELSPPRALPAPVPQSRAS 337 GS G ++ P++ P ++ P P PQ + S Sbjct: 473 GSYGGMQQQPQQQQPMQSAPPPAPQRQTS 501 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,968,588 Number of Sequences: 27780 Number of extensions: 202036 Number of successful extensions: 718 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 712 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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