Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308E01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 87 5e-18
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 87 5e-18
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 56 1e-08
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 56 1e-08
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 51 4e-07
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 38 0.004
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 38 0.004
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 38 0.004
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 36 0.018
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.094
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 33 0.12
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 32 0.22
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 32 0.22
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 32 0.22
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 32 0.22
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 30 1.2
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 2.7
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 27 8.1
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 27 8.1
AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium chann... 27 8.1
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 87.4 bits (207), Expect = 5e-18
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +2
Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184
LP+Y Q K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K
Sbjct: 67 LPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLK 126
Query: 185 DCMDPEDDDGMIPYAAFLKKVMA 253
ED +GM+ Y F+KKV+A
Sbjct: 127 GV---EDGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 87.4 bits (207), Expect = 5e-18
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +2
Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184
LP+Y Q K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K
Sbjct: 67 LPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLK 126
Query: 185 DCMDPEDDDGMIPYAAFLKKVMA 253
ED +GM+ Y F+KKV+A
Sbjct: 127 GV---EDGEGMVKYEDFIKKVLA 146
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +2
Query: 23 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 202
A+K KD + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 203 DDDGMIPYAAFL 238
D DG + Y F+
Sbjct: 132 DGDGQVNYEEFV 143
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 236 L 238
L
Sbjct: 70 L 70
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +2
Query: 23 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 202
A+K KD + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 203 DDDGMIPYAAFL 238
D DG + Y F+
Sbjct: 132 DGDGQVNYEEFV 143
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 236 L 238
L
Sbjct: 70 L 70
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 53.6 bits (123), Expect = 8e-08
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184
+PI+ K++++ E+F+E L +DK NG++ AEL H L LGE+L D +V ++
Sbjct: 62 VPIFQSVSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLS 121
Query: 185 DCMDPEDDDGMIPYAAFLKKVM 250
D G + + F++ VM
Sbjct: 122 ---GHNDSHGNVNISDFVRAVM 140
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 23 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 202
A+K K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 80
Query: 203 DDDGMIPYAAF 235
D DG I +F
Sbjct: 81 DGDGQIMRVSF 91
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +2
Query: 5 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 184
LP+ S + +K + EDF++ L +DK G + AEL L +G+KL D E ++
Sbjct: 65 LPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVA 124
Query: 185 DCMDPEDDDGMIPYAAFLKKVM 250
++D+G I F+K +M
Sbjct: 125 G----QEDNGKIKIETFVKTIM 142
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 241
E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K
Sbjct: 157 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 213
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 53 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 232
++F E ++DK+ NG + EL + +LG+ + E+ E+ + D +G I +
Sbjct: 81 DEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEV--DIDGNGQIEFPE 138
Query: 233 F---LKKVMA*KTSQLV 274
F +K++M S+++
Sbjct: 139 FCVMMKRMMKETDSEMI 155
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 32 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 211
+ D+G E+ E +LYDK NG + ++L L AL + + + E+ E+ + D
Sbjct: 88 ENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEI--DADGS 145
Query: 212 GMIPYAAFLK 241
G + + F++
Sbjct: 146 GTVDFDEFME 155
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 241
E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K
Sbjct: 100 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 156
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 53 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 232
++F E ++DK+ NG + EL + +LG+ + E+ E+ + D +G I +
Sbjct: 24 DEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEV--DIDGNGQIEFPE 81
Query: 233 F---LKKVMA*KTSQLV 274
F +K++M S+++
Sbjct: 82 FCVMMKRMMKETDSEMI 98
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 32 DKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 211
+ D+G E+ E +LYDK NG + ++L L AL + + + E+ E+ + D
Sbjct: 88 ENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEI--DADGS 145
Query: 212 GMIPYAAFLK 241
G + + F++
Sbjct: 146 GTVDFDEFME 155
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 238
+ ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139
Score = 30.3 bits (65), Expect = 0.87
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 238
E + +DKN +G + EL LL LGEK +S++ + + D +G I FL
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +2
Query: 74 KLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDD 211
K++DK+ NG + E H + +GE+ + EV E+ ++ +D + D+
Sbjct: 102 KVFDKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIRE-VDKDGDE 146
Score = 33.5 bits (73), Expect = 0.094
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 53 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 232
++F + KL+DK+ N M EL + LG + E+ + + D +G I +
Sbjct: 23 QEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEY--DVDGNGKIDFGE 80
Query: 233 FLK--KVMA*KTSQLVISLVIRSF 298
F K K M +T Q +I L + F
Sbjct: 81 FCKMMKEMNKETDQELIRLAFKVF 104
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 77 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 241
+YDKN++G + G ELT LL G E + + D D DG + Y +K
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
+F E L+DK+ NG + EL + ALG+ + ++ E+ D D +G + + F
Sbjct: 30 EFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDV--DLDGNGQVEFPEF 87
Query: 236 ---LKKVMA*KTSQLV 274
+K++M S+++
Sbjct: 88 CVMMKRIMKETDSEMI 103
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 38 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 199
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 65 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
EC ++D++ENG + + L LG+ D+ + E+ + D +G+I Y F
Sbjct: 134 ECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEA--DVDGNGVIDYDEF 188
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 406 QPARAPSHVDIPYNILDTDKPPFLYEQHNINCFCT 510
+ A PS++ + N LD+D+ YE H+ + FCT
Sbjct: 37 EKANCPSNISLYVNHLDSDRSVIPYEYHSFD-FCT 70
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 408 LRAPPEELSPPRALPAPVPQSRASV 334
LRAP EE PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2
Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
+ ++ L D+N+ M EL L +GE++ E+ K + + +GM+P+ A
Sbjct: 81 EIIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEI----KYLLSKVEVNGMVPHQAL 136
Query: 236 LKKV 247
++ +
Sbjct: 137 IEYI 140
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
++ +L+DK+ NG + EL + +LG+ + E+ ++ + D G I + F
Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEV--DIDGSGTIDFGEF 93
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 56 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 235
++ +L+DK+ NG + EL + +LG+ + E+ ++ + D G I + F
Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEV--DIDGSGTIDFGEF 93
>AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium channel,
beta subunit protein1 protein.
Length = 526
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 423 GSAGWLRAPPEELSPPRALPAPVPQSRAS 337
GS G ++ P++ P ++ P P PQ + S
Sbjct: 473 GSYGGMQQQPQQQQPMQSAPPPAPQRQTS 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,968,588
Number of Sequences: 27780
Number of extensions: 202036
Number of successful extensions: 718
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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