Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.31 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   5.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.7  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +2

Query: 368 YVILYVPCAILKFY------SLKRIIIF-HMVFLFKHYMF*RERFMRNLGGPI 505
           +V  Y P A + FY      S++ III  H V + K + F  E  MRN G  I
Sbjct: 109 FVHFYYPVATMSFYVLNFFGSIQFIIISKHWVTIMKEWSF-MEMSMRNYGSSI 160


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 25  SIHLSYISCPVRSLTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRVACV 180
           ++HL  + C +    Y+H      F+I  ++ L L  + +F C+L++ + C+
Sbjct: 249 TVHLLLLVC-IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII-LLCI 298


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 64  LTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 171
           + YI   E ET   G +   VLE++    CS   RV
Sbjct: 249 IPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRV 284


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/27 (18%), Positives = 16/27 (59%)
 Frame = +3

Query: 441 CFYLNIICFNVNGLCEISVDRFCIIIL 521
           C Y  I+ + ++ + ++ + +FC  ++
Sbjct: 163 CLYRWIVLYTLSKMSQVMLIQFCAFVV 189


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 359 SVVYVILYVPCAILKFYSLKRIIIFHMVFLFKHYMF 466
           SVVYV++      L +   K +++  + F+ K  +F
Sbjct: 267 SVVYVLILYILESLLYMVTKLVVVTFLKFIKKIQIF 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,595
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)