BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D10f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 3.5 AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying de... 28 4.7 AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 27 6.2 AF038608-6|AAT92088.1| 312|Caenorhabditis elegans Serpentine re... 27 8.1 AC084197-4|AAO38575.1| 335|Caenorhabditis elegans Serpentine re... 27 8.1 >AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucuronosyltransferase protein14 protein. Length = 531 Score = 28.3 bits (60), Expect = 3.5 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 353 VRSVVYVILYVPCAILKFYSLKRIIIFHMVFLFKHYMF 466 V+++VY +L+ F S K I+IF+ +F F H F Sbjct: 3 VKTLVYFLLFTG-----FISCKNILIFNPIFAFSHVKF 35 >AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying defective protein 4,isoform d protein. Length = 195 Score = 27.9 bits (59), Expect = 4.7 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 Query: 266 HMRNSCDGMFVRLVHF*FQNETIKRTKAPVRSVVY 370 H RN DG +V +H F+ + R K P R++ Y Sbjct: 49 HRRNVDDGYYVEEIH--FEPPQVVRKKQPTRNLFY 81 >AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical protein Y23H5B.6 protein. Length = 732 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -1 Query: 155 EHMKNFKISRTKKFMRPITKVSSSPQCIYVKL 60 E + N IS+TK + +TKVS++ + + KL Sbjct: 579 EKISNITISKTKPLKKAVTKVSAAKKILNKKL 610 >AF038608-6|AAT92088.1| 312|Caenorhabditis elegans Serpentine receptor, class z protein82 protein. Length = 312 Score = 27.1 bits (57), Expect = 8.1 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +1 Query: 409 FVKTNYNISYGVFI*TLYVLT*TVYAKSRWTDF 507 +++ Y I +G + +Y + T+++KSRWT F Sbjct: 149 YIRLFYLICFGTEL-IMYFYSPTIWSKSRWTTF 180 >AC084197-4|AAO38575.1| 335|Caenorhabditis elegans Serpentine receptor, class v protein27 protein. Length = 335 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +2 Query: 293 FVRLVHF*FQNETIKRTKAPVRSVVYVILYVPCAILKFYSLKRIII 430 F+R +F +Q I A +++YV LY+ C + SL+R ++ Sbjct: 76 FIRQFYFDYQEYYIA---AATYNIIYVSLYIRCTGIILLSLQRYLV 118 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,622,130 Number of Sequences: 27780 Number of extensions: 187639 Number of successful extensions: 434 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 426 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 434 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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