Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.2  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   8.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 162 FNGCYYTYKPSSSITLSIKKNRT 230
           FN C   Y+PSS   ++++ N T
Sbjct: 752 FNHCLEVYRPSSGGAVALQSNGT 774


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 310 HSRKQSRFLCPYIP 269
           HS    R LCPY P
Sbjct: 544 HSHTPQRSLCPYCP 557


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 310 HSRKQSRFLCPYIP 269
           HS    R LCPY P
Sbjct: 520 HSHTPQRSLCPYCP 533


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 136 VIYY*FLHYLMDVIIHINLPLQSRYLLK 219
           V++Y FL YL  V +++ +P    YL++
Sbjct: 263 VLFYEFLPYLAIVCMNLVVPQLFNYLVQ 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,032
Number of Sequences: 2352
Number of extensions: 8884
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)