Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D09f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   5.8  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   5.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   7.7  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 100 KYILYKHLLEETRQ*GYRVQGHYLFH 23
           +Y++++  +  T   G+RV+G  L H
Sbjct: 398 RYMVWRETISSTATLGFRVEGIKLAH 423


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 100 KYILYKHLLEETRQ*GYRVQGHYLFH 23
           +Y++++  +  T   G+RV+G  L H
Sbjct: 313 RYMVWRETISSTATLGFRVEGIKLAH 338


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 100 KYILYKHLLEETRQ*GYRVQGHYLFH 23
           +Y++++  +  T   G+RV+G  L H
Sbjct: 632 RYMVWRETISSTATLGFRVEGIKLAH 657


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 122 KRGRVGS*IYFVQTSV 75
           K G +GS +YF+Q  +
Sbjct: 485 KEGTIGSKMYFIQEGI 500


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 122 KRGRVGS*IYFVQTSV 75
           K G +GS +YF+Q  +
Sbjct: 453 KEGTIGSKMYFIQEGI 468


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 82  VCTKYI*LPTRPRFVSETVI 141
           +C+  +   TRP FVS+ +I
Sbjct: 15  ICSPSVHCGTRPSFVSDEMI 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,582
Number of Sequences: 438
Number of extensions: 2862
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)