Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   2.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -3

Query: 270 SSFTKLQVLKPQEICSKSYFYHWWPPYFLVSEFYSCCYG 154
           +S  KLQ  +P + C + + Y       +  +FY C  G
Sbjct: 93  TSRPKLQEPQPSQHCPRKHGYFAHEEPHICDKFYYCVDG 131


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 392 YFRTKHYKKQKPPRAEFGT 448
           Y++ K    ++PP  E GT
Sbjct: 446 YYKLKTANNKRPPSTELGT 464


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 219 SYFYHWWPPYFLVSEFY 169
           +YF+++W   F  S+F+
Sbjct: 66  AYFFNFWTILFSRSDFF 82


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 389 GYFRTKHYKKQKPPR 433
           G +RT  YKK  P R
Sbjct: 49  GVYRTDFYKKLSPMR 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,779
Number of Sequences: 336
Number of extensions: 2687
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)