BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D06f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-2809|AAF49405.1| 78|Drosophila melanogaster CG9669-PA... 58 1e-08 BT011105-1|AAR82771.1| 74|Drosophila melanogaster LP09435p pro... 56 2e-08 AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro... 28 6.7 AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA... 28 6.7 >AE014296-2809|AAF49405.1| 78|Drosophila melanogaster CG9669-PA protein. Length = 78 Score = 57.6 bits (133), Expect = 1e-08 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = -2 Query: 370 IESMIRYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRD--MFKELLLSLVA 197 ++ M RY SP+NPAVFPH TAWFF++ V S K+S++ + KELL+SL A Sbjct: 1 MDVMQRYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCA 59 Query: 196 AXXXXXXXXXXXLWVGIYV 140 + L VGIYV Sbjct: 60 SIFLGFGIVFLLLTVGIYV 78 >BT011105-1|AAR82771.1| 74|Drosophila melanogaster LP09435p protein. Length = 74 Score = 56.4 bits (130), Expect = 2e-08 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = -2 Query: 355 RYTSPINPAVFPHXXXXXXXXXXXXTAWFFVYEVTSTKASRD--MFKELLLSLVAAXXXX 182 RY SP+NPAVFPH TAWFF++ V S K+S++ + KELL+SL A+ Sbjct: 2 RYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCASIFLG 60 Query: 181 XXXXXXXLWVGIYV 140 L VGIYV Sbjct: 61 FGIVFLLLTVGIYV 74 >AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p protein. Length = 1380 Score = 28.3 bits (60), Expect = 6.7 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 159 SNKNKIPKPENKAATNDKSNSLNISLE 239 SN NK+ KPE KA + N LN L+ Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314 >AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA protein. Length = 1380 Score = 28.3 bits (60), Expect = 6.7 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 159 SNKNKIPKPENKAATNDKSNSLNISLE 239 SN NK+ KPE KA + N LN L+ Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,305,767 Number of Sequences: 53049 Number of extensions: 397340 Number of successful extensions: 918 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 883 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 916 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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