SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D05f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate...   161   1e-38
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;...   155   4e-37
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/...   151   7e-36
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular...   146   4e-34
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam...    93   4e-18
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ...    89   8e-17
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar...    88   1e-16
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T...    79   6e-14
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:...    75   8e-13
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell...    75   1e-12
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:...    69   9e-11
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta...    69   9e-11
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha...    62   6e-09
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ...    62   1e-08
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa...    55   9e-07
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo...    53   3e-06
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;...    48   1e-04
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu...    47   2e-04
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar...    47   3e-04
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar...    46   5e-04
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa...    46   5e-04
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus...    46   7e-04
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:...    42   0.006
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ...    42   0.011
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact...    42   0.011
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo...    39   0.060
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re...    36   0.43 
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen...    34   1.7  

>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
           Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
           (Human)
          Length = 84

 Score =  161 bits (390), Expect = 1e-38
 Identities = 70/82 (85%), Positives = 74/82 (90%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 361 LCQPTGGRARLTEGCSFRRKQH 426
           LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63  LCQPTGGKARLTEGCSFRRKQH 84


>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
           n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
           protein - Homo sapiens (Human)
          Length = 84

 Score =  155 bits (377), Expect = 4e-37
 Identities = 68/82 (82%), Positives = 73/82 (89%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           LA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 361 LCQPTGGRARLTEGCSFRRKQH 426
           LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 63  LCQPTGGKARLTEGCSFRRKQH 84


>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
           Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
           Neurospora crassa
          Length = 82

 Score =  151 bits (367), Expect = 7e-36
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           LA+DLL+PSPASE RKHKLK LVP P S+FMDVKCPGC+ ITTVFSHAQ VV+C GC+T+
Sbjct: 3   LAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTV 62

Query: 361 LCQPTGGRARLTEGCSFRRK 420
           LCQPTGG+ARLTEGCSFRRK
Sbjct: 63  LCQPTGGKARLTEGCSFRRK 82


>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
            n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
            Nasonia vitripennis
          Length = 2064

 Score =  146 bits (353), Expect = 4e-34
 Identities = 64/80 (80%), Positives = 68/80 (85%)
 Frame = +1

Query: 181  LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
            LA D LHPSPA E+RKHKLKRLV  PNSYFMDVKCPGCY I T+FSHAQR V C GC TI
Sbjct: 1982 LAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGCRTI 2041

Query: 361  LCQPTGGRARLTEGCSFRRK 420
            LC PTGG+ARLTEGCSFR+K
Sbjct: 2042 LCTPTGGKARLTEGCSFRKK 2061


>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
           lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
           lamblia ATCC 50803
          Length = 81

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 38/70 (54%), Positives = 49/70 (70%)
 Frame = +1

Query: 187 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 366
           +DLL+P P  E+RKHKLKRLV  PNSYF+++KC GC  I  V+SHA   V C GC++ + 
Sbjct: 3   VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62

Query: 367 QPTGGRARLT 396
            PTGG+   T
Sbjct: 63  IPTGGKCAFT 72


>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
           protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
           similar to ribosomal protein S27 - Canis familiaris
          Length = 115

 Score = 88.6 bits (210), Expect = 8e-17
 Identities = 43/62 (69%), Positives = 48/62 (77%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           L  DLLHPSP  ++RKHK K LV  PNSYFMD+KCPGCYKITTVFSHAQ VV+ A   T+
Sbjct: 3   LVKDLLHPSP-EKKRKHKKKHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--QTL 59

Query: 361 LC 366
            C
Sbjct: 60  RC 61


>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
           theta|Rep: 40S ribosomal protein S27 - Guillardia theta
           (Cryptomonas phi)
          Length = 81

 Score = 88.2 bits (209), Expect = 1e-16
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = +1

Query: 217 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 396
           E+ KHK KR++P+PNSYF+++ C  C     +FSH+Q  +VC  C+  LC PTGG+ARL 
Sbjct: 14  EKMKHKKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLI 73

Query: 397 EGCSFRR 417
           +GC F R
Sbjct: 74  KGCKFSR 80


>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
           Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
           putative - Trichomonas vaginalis G3
          Length = 86

 Score = 79.0 bits (186), Expect = 6e-14
 Identities = 35/78 (44%), Positives = 45/78 (57%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           L +D+LHPS   E   +K K LVP+P S F+ ++CP C  +TT FSH+   V C  C T 
Sbjct: 4   LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63

Query: 361 LCQPTGGRARLTEGCSFR 414
           L  PTGGR  L +    R
Sbjct: 64  LATPTGGRILLADQVEIR 81


>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
           LRRGT00170 - Rattus norvegicus (Rat)
          Length = 496

 Score = 75.4 bits (177), Expect = 8e-13
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +1

Query: 217 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 375
           E+RKHK K LV  P+SYFMDVK  GCYK+  +FS    VV+  GCST+ CQPT
Sbjct: 202 EKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254


>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S27 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 93

 Score = 74.5 bits (175), Expect = 1e-12
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +1

Query: 187 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 366
           +DL +PS  +E +KHKLKRL+  PNS+++  KC  C KI  +FSH+     C  CST+L 
Sbjct: 8   LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67

Query: 367 QPTGGR 384
           +P+GG+
Sbjct: 68  RPSGGK 73


>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
           LRRGT00162 - Rattus norvegicus (Rat)
          Length = 291

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = +1

Query: 196 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 339
           L  +   E+RKHK +RLV  PNSYFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 174 LQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221


>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
           group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
          Length = 66

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 291
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPG
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
           Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
           - Encephalitozoon cuniculi
          Length = 85

 Score = 62.5 bits (145), Expect = 6e-09
 Identities = 28/79 (35%), Positives = 42/79 (53%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           +A DL  P+       +K  RL    N +FM V+C GC   T  +SH+Q  + C GC  I
Sbjct: 1   MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60

Query: 361 LCQPTGGRARLTEGCSFRR 417
           +   +GGRA ++  C F++
Sbjct: 61  ILTSSGGRAVVSPNCEFKK 79


>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 217

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 26/50 (52%), Positives = 35/50 (70%)
 Frame = +1

Query: 190 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 339
           DLL+P    E++K+K KRL+  PNSYFMDVKC  C  I  +FS+AQ  ++
Sbjct: 4   DLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53



 Score = 37.9 bits (84), Expect = 0.14
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +1

Query: 349 CSTILCQPTGGRARLTEGCSFRRK 420
           CS ILC+PTGG+ ++  GC+F+ K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216


>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
           Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
           aerophilum
          Length = 67

 Score = 55.2 bits (127), Expect = 9e-07
 Identities = 24/52 (46%), Positives = 30/52 (57%)
 Frame = +1

Query: 238 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 393
           K L+P P S F+  +CP C      FSHA  VV C  C  +L  PTGG+A+L
Sbjct: 7   KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58


>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
           Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
           pernix
          Length = 73

 Score = 53.2 bits (122), Expect = 3e-06
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = +1

Query: 238 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 393
           K L+P P S F+ V CP C     VFSH+     C  C  +L +PTGG+AR+
Sbjct: 13  KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64


>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
           Saccharomyces cerevisiae|Rep: Uncharacterized protein
           YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
          Length = 38

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = -1

Query: 293 QPGHLTSMK*ELGCGTSRLSLCFLLSDAGEGCNKS 189
           QPGHLTS K +LG  T+  +LCFL S+A  GCNKS
Sbjct: 4   QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNKS 38


>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
           symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
           symbiosum
          Length = 224

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = +1

Query: 247 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 393
           VP P S F+ ++C  C   T V+S A+  V C  C  +L +P GG+A L
Sbjct: 8   VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56


>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
           Euryarchaeota|Rep: 30S ribosomal protein S27e -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 57

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 24/42 (57%)
 Frame = +1

Query: 268 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 393
           F +V+CP C    TVF  A   V CA C T L +PTGG A L
Sbjct: 5   FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46


>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
           Euryarchaeota|Rep: 30S ribosomal protein S27e -
           Pyrococcus furiosus
          Length = 63

 Score = 46.0 bits (104), Expect = 5e-04
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 238 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 384
           K ++P P S F+ VKC  C     VFSH    V C  C   L +PTGG+
Sbjct: 3   KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51


>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
           Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
           kandleri
          Length = 73

 Score = 46.0 bits (104), Expect = 5e-04
 Identities = 20/50 (40%), Positives = 28/50 (56%)
 Frame = +1

Query: 244 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 393
           LVP P S F+ V+C  C     +F +A   V C  C   L +PTGG+A++
Sbjct: 15  LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64


>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
           S27E - Candidatus Nitrosopumilus maritimus SCM1
          Length = 65

 Score = 45.6 bits (103), Expect = 7e-04
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +1

Query: 247 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 393
           +P P+S F  V C  C ++  V+SHA   V C  C   + + TG +A++
Sbjct: 8   IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56


>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
           LRRGT00168 - Rattus norvegicus (Rat)
          Length = 109

 Score = 42.3 bits (95), Expect = 0.006
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 196 LHPSPASERRKHKLKRLVPHPNSYFMD 276
           LHP P  E+RK+K KRLV  PNSYF++
Sbjct: 13  LHPCPEEEKRKYKKKRLVQSPNSYFVE 39


>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
           protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
           to ribosomal protein S27 - Homo sapiens
          Length = 83

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 29/82 (35%), Positives = 36/82 (43%)
 Frame = +1

Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360
           L  DL HP    +RR    KRLV   + Y MDVKC GC K   V+     VV C  C  +
Sbjct: 3   LTKDLPHPL---QRRSGNKKRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPACRLL 57

Query: 361 LCQPTGGRARLTEGCSFRRKQH 426
              P  G +        + +QH
Sbjct: 58  ---PDRGTSEAYRKMLLQTEQH 76


>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
           Halobacteriaceae|Rep: Ribosomal protein S27.eR -
           Haloquadratum walsbyi (strain DSM 16790)
          Length = 75

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +1

Query: 268 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 387
           F  ++CP C     +F  A  VV CA C T L  PTGG A
Sbjct: 5   FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44


>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
           Thermoplasmatales|Rep: 30S ribosomal protein S27e -
           Thermoplasma acidophilum
          Length = 65

 Score = 39.1 bits (87), Expect = 0.060
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 259 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 381
           N +F+ +KC  C  +  VF+     V C  C   + +PTGG
Sbjct: 13  NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53


>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
           Cxpwmw06 - Periplaneta americana (American cockroach)
          Length = 54

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 13/33 (39%), Positives = 25/33 (75%)
 Frame = -3

Query: 363 KDR*ASSADHHSLCVTKNCCNLVTARALNIHEI 265
           +DR  S   +++LC+T++ C+LV  RAL++H++
Sbjct: 22  QDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54


>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr16 scaffold_10, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 302

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 259 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEG 402
           N++ +   CP C +      +  ++V CAGC  I+ QP G  +R + G
Sbjct: 239 NNFVIKGNCPACRR--QFIGYKNQIVRCAGCGNIVWQPKGDVSRGSRG 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,658,727
Number of Sequences: 1657284
Number of extensions: 7609484
Number of successful extensions: 15436
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15433
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -