BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D05f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 161 2e-39 L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 161 2e-39 BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 161 2e-39 BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 161 2e-39 AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 161 2e-39 AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 161 2e-39 BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 155 9e-38 BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 141 1e-33 AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 135 8e-32 AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 69 1e-11 >U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 protein. Length = 84 Score = 161 bits (390), Expect = 2e-39 Identities = 70/82 (85%), Positives = 74/82 (90%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. Length = 84 Score = 161 bits (390), Expect = 2e-39 Identities = 70/82 (85%), Positives = 74/82 (90%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (metallopanstimulin 1) protein. Length = 84 Score = 161 bits (390), Expect = 2e-39 Identities = 70/82 (85%), Positives = 74/82 (90%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (metallopanstimulin 1) protein. Length = 84 Score = 161 bits (390), Expect = 2e-39 Identities = 70/82 (85%), Positives = 74/82 (90%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 (metallopanstimulin 1) protein. Length = 84 Score = 161 bits (390), Expect = 2e-39 Identities = 70/82 (85%), Positives = 74/82 (90%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 protein. Length = 84 Score = 161 bits (390), Expect = 2e-39 Identities = 70/82 (85%), Positives = 74/82 (90%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like protein. Length = 84 Score = 155 bits (376), Expect = 9e-38 Identities = 68/82 (82%), Positives = 73/82 (89%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 360 LA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+ Sbjct: 3 LARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62 Query: 361 LCQPTGGRARLTEGCSFRRKQH 426 LCQPTGG+ARLTEGCSFRRKQH Sbjct: 63 LCQPTGGKARLTEGCSFRRKQH 84 >BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. Length = 113 Score = 141 bits (342), Expect = 1e-33 Identities = 63/82 (76%), Positives = 68/82 (82%) Frame = +1 Query: 166 CLHF*LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCA 345 C LA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C Sbjct: 14 CFFVQLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCV 73 Query: 346 GCSTILCQPTGGRARLTEGCSF 411 GCST+LCQPTGG+ARLTEG SF Sbjct: 74 GCSTVLCQPTGGKARLTEGISF 95 >AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 protein. Length = 69 Score = 135 bits (327), Expect = 8e-32 Identities = 58/69 (84%), Positives = 62/69 (89%) Frame = +1 Query: 190 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 369 DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ Sbjct: 1 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60 Query: 370 PTGGRARLT 396 PTGG+ARLT Sbjct: 61 PTGGKARLT 69 >AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 (metallopanstimulin 1) protein. Length = 66 Score = 68.5 bits (160), Expect = 1e-11 Identities = 30/37 (81%), Positives = 31/37 (83%) Frame = +1 Query: 181 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 291 LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 65,990,370 Number of Sequences: 237096 Number of extensions: 1240790 Number of successful extensions: 2022 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2022 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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