BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D04f (433 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 66 1e-11 SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 66 1e-11 SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11 SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 53 9e-08 SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 53 9e-08 SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 50 6e-07 SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 50 6e-07 SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 45 2e-05 SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05 SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 43 9e-05 SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 42 3e-04 SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 39 0.002 SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09) 38 0.005 SB_23123| Best HMM Match : efhand (HMM E-Value=2.8e-07) 37 0.006 SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006 SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 35 0.025 SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 34 0.057 SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 33 0.10 SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 30 0.93 SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 27 6.6 >SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) Length = 659 Score = 66.1 bits (154), Expect = 1e-11 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI Sbjct: 7 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 42 Score = 31.5 bits (68), Expect = 0.31 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 83 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 115 >SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) Length = 250 Score = 66.1 bits (154), Expect = 1e-11 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI Sbjct: 7 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 42 Score = 31.5 bits (68), Expect = 0.31 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 83 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 115 >SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 299 Score = 66.1 bits (154), Expect = 1e-11 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53 Score = 31.5 bits (68), Expect = 0.31 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126 >SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) Length = 49 Score = 53.2 bits (122), Expect = 9e-08 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G ITT+ELG MR LGQNPTE EL DM+ Sbjct: 10 DKDGNGHITTRELGAIMRSLGQNPTENELQDMV 42 >SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) Length = 97 Score = 53.2 bits (122), Expect = 9e-08 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G ITT+ELG MR LGQNPTE EL DM+ Sbjct: 58 DKDGNGHITTRELGAIMRSLGQNPTENELQDMV 90 >SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) Length = 420 Score = 50.4 bits (115), Expect = 6e-07 Identities = 24/36 (66%), Positives = 27/36 (75%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 AL DKDG G+I++ EL MR LGQNPTE EL DMI Sbjct: 297 ALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMI 332 Score = 32.7 bits (71), Expect = 0.13 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DK+GDG I++ EL M LG+ T+ E+ +MI Sbjct: 373 DKNGDGMISSSELKLVMSNLGERLTDDEVDEMI 405 >SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) Length = 202 Score = 50.4 bits (115), Expect = 6e-07 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKD G+ITT+ELG MR LG+NPTE EL DMI Sbjct: 60 DKDSSGSITTRELGGIMRSLGENPTEIELQDMI 92 >SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) Length = 153 Score = 45.2 bits (102), Expect = 2e-05 Identities = 21/39 (53%), Positives = 27/39 (69%) Frame = +2 Query: 317 GTRALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 G +L DKDG GTI+ +EL M+ LGQNP++ EL MI Sbjct: 4 GGFSLFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMI 42 Score = 28.7 bits (61), Expect = 2.2 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 D++GDG+I+ EL + M LG+ ++ E+ +M+ Sbjct: 83 DRNGDGSISEWELRSVMASLGEKLSDDEIKEMM 115 >SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 321 Score = 44.4 bits (100), Expect = 4e-05 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + D DG G +TTKEL MR LG NPTE E+ +M+ Sbjct: 156 MYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMV 190 >SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) Length = 285 Score = 43.2 bits (97), Expect = 9e-05 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + D D +GTI + ELG+ MR LGQNPTE + DMI Sbjct: 18 MFDNDRNGTICSHELGSVMRALGQNPTEDMIRDMI 52 Score = 28.3 bits (60), Expect = 2.8 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDGDG IT +L M+ +N ++ +L MI Sbjct: 83 DKDGDGFITFGDLKKTMQECDENLSDDDLKRMI 115 >SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) Length = 132 Score = 41.5 bits (93), Expect = 3e-04 Identities = 18/36 (50%), Positives = 25/36 (69%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 ++ DKD G+I T EL MR LG+NP++ E+ DMI Sbjct: 10 SMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMI 45 >SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) Length = 150 Score = 38.7 bits (86), Expect = 0.002 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DK GD I + +LG +R LGQNPT AE+ ++ Sbjct: 19 LYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIV 53 >SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09) Length = 231 Score = 37.5 bits (83), Expect = 0.005 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + D +GDG I+ +ELG MR GQ ++ EL DMI Sbjct: 172 MYDTNGDGQISAEELGQAMREAGQLVSDEELKDMI 206 >SB_23123| Best HMM Match : efhand (HMM E-Value=2.8e-07) Length = 50 Score = 37.1 bits (82), Expect = 0.006 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DK+GDG I +ELG MR +G +P + EL MI Sbjct: 10 DKNGDGRIDAEELGIVMRSIGLHPKDEELKAMI 42 >SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 350 Score = 37.1 bits (82), Expect = 0.006 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DK+GDG I +ELG MR +G +P + EL MI Sbjct: 25 DKNGDGRIDAEELGIVMRSIGLHPKDEELKAMI 57 Score = 30.3 bits (65), Expect = 0.71 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDG+G I+ +E+ + +G N TE E +++ Sbjct: 224 SLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELV 259 Score = 29.5 bits (63), Expect = 1.2 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDG+G I+ +E+ +G N TE E +++ Sbjct: 95 SLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELV 130 >SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) Length = 354 Score = 35.1 bits (77), Expect = 0.025 Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 D +GDG IT EL + LG N TEAEL DM+ Sbjct: 222 DDNGDGCITATELKKLVTSLGYNITEAELMDMM 254 >SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) Length = 213 Score = 33.9 bits (74), Expect = 0.057 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = +2 Query: 383 MRXLGQNPTEAELPDMI 433 MR LGQNPTEAEL DMI Sbjct: 1 MRSLGQNPTEAELQDMI 17 Score = 31.5 bits (68), Expect = 0.31 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 58 DKDGNGFISAAELRHVMTNLGEKLTDEEVEEMI 90 >SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) Length = 646 Score = 33.1 bits (72), Expect = 0.10 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421 +L D+ GDG I ++G +R LG NPT AE+ Sbjct: 521 SLFDRVGDGKIECDQIGCLLRSLGLNPTGAEV 552 >SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) Length = 146 Score = 29.9 bits (64), Expect = 0.93 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421 L D+ GDG I ++G +R +G NP + E+ Sbjct: 17 LFDQIGDGNINYDQIGKMLRAMGLNPIDGEV 47 >SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) Length = 813 Score = 27.1 bits (57), Expect = 6.6 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = +2 Query: 323 RALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDM 430 R L DG I ++G G+R G +LPD+ Sbjct: 52 RGLIQPKNDGVINLAQVGDGIRATGGFELNVDLPDI 87 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,206,469 Number of Sequences: 59808 Number of extensions: 77047 Number of successful extensions: 129 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 129 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 822495283 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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