Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308D04f
(433 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 66 1e-11
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 66 1e-11
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 53 9e-08
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 53 9e-08
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 50 6e-07
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 50 6e-07
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 45 2e-05
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 43 9e-05
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 42 3e-04
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 39 0.002
SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09) 38 0.005
SB_23123| Best HMM Match : efhand (HMM E-Value=2.8e-07) 37 0.006
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 35 0.025
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 34 0.057
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 33 0.10
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 30 0.93
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 27 6.6
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+L DKDGDGTITTKELGT MR LGQNPTEAEL DMI
Sbjct: 7 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 42
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDG+G I+ EL M LG+ T+ E+ +MI
Sbjct: 83 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 115
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+L DKDGDGTITTKELGT MR LGQNPTEAEL DMI
Sbjct: 7 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 42
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDG+G I+ EL M LG+ T+ E+ +MI
Sbjct: 83 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 115
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+L DKDGDGTITTKELGT MR LGQNPTEAEL DMI
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDG+G I+ EL M LG+ T+ E+ +MI
Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 53.2 bits (122), Expect = 9e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDG+G ITT+ELG MR LGQNPTE EL DM+
Sbjct: 10 DKDGNGHITTRELGAIMRSLGQNPTENELQDMV 42
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 53.2 bits (122), Expect = 9e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDG+G ITT+ELG MR LGQNPTE EL DM+
Sbjct: 58 DKDGNGHITTRELGAIMRSLGQNPTENELQDMV 90
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 50.4 bits (115), Expect = 6e-07
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
AL DKDG G+I++ EL MR LGQNPTE EL DMI
Sbjct: 297 ALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMI 332
Score = 32.7 bits (71), Expect = 0.13
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DK+GDG I++ EL M LG+ T+ E+ +MI
Sbjct: 373 DKNGDGMISSSELKLVMSNLGERLTDDEVDEMI 405
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 50.4 bits (115), Expect = 6e-07
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKD G+ITT+ELG MR LG+NPTE EL DMI
Sbjct: 60 DKDSSGSITTRELGGIMRSLGENPTEIELQDMI 92
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +2
Query: 317 GTRALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
G +L DKDG GTI+ +EL M+ LGQNP++ EL MI
Sbjct: 4 GGFSLFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMI 42
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
D++GDG+I+ EL + M LG+ ++ E+ +M+
Sbjct: 83 DRNGDGSISEWELRSVMASLGEKLSDDEIKEMM 115
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+ D DG G +TTKEL MR LG NPTE E+ +M+
Sbjct: 156 MYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMV 190
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 43.2 bits (97), Expect = 9e-05
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+ D D +GTI + ELG+ MR LGQNPTE + DMI
Sbjct: 18 MFDNDRNGTICSHELGSVMRALGQNPTEDMIRDMI 52
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDGDG IT +L M+ +N ++ +L MI
Sbjct: 83 DKDGDGFITFGDLKKTMQECDENLSDDDLKRMI 115
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
++ DKD G+I T EL MR LG+NP++ E+ DMI
Sbjct: 10 SMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMI 45
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
L DK GD I + +LG +R LGQNPT AE+ ++
Sbjct: 19 LYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIV 53
>SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09)
Length = 231
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+ D +GDG I+ +ELG MR GQ ++ EL DMI
Sbjct: 172 MYDTNGDGQISAEELGQAMREAGQLVSDEELKDMI 206
>SB_23123| Best HMM Match : efhand (HMM E-Value=2.8e-07)
Length = 50
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DK+GDG I +ELG MR +G +P + EL MI
Sbjct: 10 DKNGDGRIDAEELGIVMRSIGLHPKDEELKAMI 42
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DK+GDG I +ELG MR +G +P + EL MI
Sbjct: 25 DKNGDGRIDAEELGIVMRSIGLHPKDEELKAMI 57
Score = 30.3 bits (65), Expect = 0.71
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+L DKDG+G I+ +E+ + +G N TE E +++
Sbjct: 224 SLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELV 259
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
+L DKDG+G I+ +E+ +G N TE E +++
Sbjct: 95 SLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELV 130
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 35.1 bits (77), Expect = 0.025
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
D +GDG IT EL + LG N TEAEL DM+
Sbjct: 222 DDNGDGCITATELKKLVTSLGYNITEAELMDMM 254
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 33.9 bits (74), Expect = 0.057
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 383 MRXLGQNPTEAELPDMI 433
MR LGQNPTEAEL DMI
Sbjct: 1 MRSLGQNPTEAELQDMI 17
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
DKDG+G I+ EL M LG+ T+ E+ +MI
Sbjct: 58 DKDGNGFISAAELRHVMTNLGEKLTDEEVEEMI 90
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421
+L D+ GDG I ++G +R LG NPT AE+
Sbjct: 521 SLFDRVGDGKIECDQIGCLLRSLGLNPTGAEV 552
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421
L D+ GDG I ++G +R +G NP + E+
Sbjct: 17 LFDQIGDGNINYDQIGKMLRAMGLNPIDGEV 47
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 323 RALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDM 430
R L DG I ++G G+R G +LPD+
Sbjct: 52 RGLIQPKNDGVINLAQVGDGIRATGGFELNVDLPDI 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,206,469
Number of Sequences: 59808
Number of extensions: 77047
Number of successful extensions: 129
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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