BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D04f (433 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 66 1e-11 AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 66 1e-11 Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 55 3e-08 Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 55 3e-08 X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 55 3e-08 AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 55 3e-08 U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 51 3e-07 Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 46 9e-06 Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 37 0.005 U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 33 0.067 Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 32 0.20 AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 31 0.27 Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.36 U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 31 0.36 AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 31 0.36 U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 31 0.47 Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 30 0.62 AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 28 2.5 >AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin protein. Length = 149 Score = 66.1 bits (154), Expect = 1e-11 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53 Score = 31.5 bits (68), Expect = 0.27 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126 >AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin protein 1 protein. Length = 149 Score = 66.1 bits (154), Expect = 1e-11 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53 Score = 31.5 bits (68), Expect = 0.27 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 94 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126 >Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical protein C13C12.1 protein. Length = 218 Score = 54.8 bits (126), Expect = 3e-08 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + DKDG+GTI+TKELG MR LGQNPTE E+ +MI Sbjct: 89 MFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMI 123 Score = 29.9 bits (64), Expect = 0.82 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G IT +E M +G +E E+ +MI Sbjct: 163 DKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMI 195 >Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical protein C18E9.1 protein. Length = 171 Score = 54.8 bits (126), Expect = 3e-08 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DKDG+G+I++KELG MR LGQNPTE EL DM+ Sbjct: 43 LFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMV 77 >X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. Length = 161 Score = 54.8 bits (126), Expect = 3e-08 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + DKDG+GTI+TKELG MR LGQNPTE E+ +MI Sbjct: 32 MFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMI 66 Score = 29.9 bits (64), Expect = 0.82 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G IT +E M +G +E E+ +MI Sbjct: 106 DKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMI 138 >AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like protein protein. Length = 171 Score = 54.8 bits (126), Expect = 3e-08 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DKDG+G+I++KELG MR LGQNPTE EL DM+ Sbjct: 43 LFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMV 77 >U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related genes protein 3 protein. Length = 164 Score = 51.2 bits (117), Expect = 3e-07 Identities = 22/35 (62%), Positives = 28/35 (80%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DKDG+GTI+ KELG MR LGQNPTE ++ ++I Sbjct: 37 LFDKDGNGTISIKELGVAMRALGQNPTEQQMMEII 71 >Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical protein T07G12.1 protein. Length = 182 Score = 46.4 bits (105), Expect = 9e-06 Identities = 21/35 (60%), Positives = 25/35 (71%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DKDG+ T+ KELG MR LG NPTE EL +M+ Sbjct: 31 LFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMV 65 Score = 29.1 bits (62), Expect = 1.4 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G IT +E M +G+ +E E+ ++I Sbjct: 105 DKDGNGYITAQEFKHFMTTMGERFSEEEVDEII 137 >Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical protein T12D8.6 protein. Length = 142 Score = 37.1 bits (82), Expect = 0.005 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +2 Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421 A D GD I+ +++G +R LGQNPTEAE+ Sbjct: 12 AYFDSKGDERISVQQVGDVLRALGQNPTEAEI 43 >U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vitellogenin-linkedtranscript protein 2 protein. Length = 156 Score = 33.5 bits (73), Expect = 0.067 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDM 430 D +GDG I +EL M+ +GQ+PTE EL M Sbjct: 31 DLNGDGYIQREELRAVMQKMGQSPTEDELDAM 62 >Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical protein K08E3.10 protein. Length = 153 Score = 31.9 bits (69), Expect = 0.20 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDM 430 D GDG I +K+L T +R + NPTEA L ++ Sbjct: 18 DTLGDGKIDSKQLPTALRAMMLNPTEALLAEV 49 >AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical protein Y73B3A.12 protein. Length = 116 Score = 31.5 bits (68), Expect = 0.27 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDG+G I+ EL M LG+ T+ E+ +MI Sbjct: 43 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 75 >Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical protein ZK673.7 protein. Length = 160 Score = 31.1 bits (67), Expect = 0.36 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DK+G+G I +L +R L N +E EL +MI Sbjct: 103 LYDKEGNGYINVSDLRDILRALDDNVSEEELDEMI 137 Score = 26.6 bits (56), Expect = 7.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + DK+G G I ++G +R +GQ E +L +I Sbjct: 26 MFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLI 60 >U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical protein F12A10.5 protein. Length = 145 Score = 31.1 bits (67), Expect = 0.36 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DK+GDG IT +EL + LG+ + +++ MI Sbjct: 17 DKNGDGRITRQELEVALLQLGEKASNSKIETMI 49 Score = 29.9 bits (64), Expect = 0.82 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DK+GDG I+ +L M LG+ TE E +MI Sbjct: 90 DKNGDGVISIDDLIFVMCQLGEKLTETEAKEMI 122 >AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C protein. Length = 160 Score = 31.1 bits (67), Expect = 0.36 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 L DK+G+G I +L +R L N +E EL +MI Sbjct: 103 LYDKEGNGYINVSDLRDILRALDDNVSEEELDEMI 137 Score = 26.6 bits (56), Expect = 7.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 + DK+G G I ++G +R +GQ E +L +I Sbjct: 26 MFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLI 60 >U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical protein K03A1.4a protein. Length = 264 Score = 30.7 bits (66), Expect = 0.47 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAEL 421 D + DG IT EL M+ GQ PT+ EL Sbjct: 138 DANNDGRITIDELEKAMQKCGQKPTKLEL 166 >Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical protein F40F9.8 protein. Length = 137 Score = 30.3 bits (65), Expect = 0.62 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421 + D+D DG I T ++ +R G NP++ EL Sbjct: 1 MFDEDSDGLIETDDVSHVLRSFGLNPSQTEL 31 >AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math domain containingprotein 25 protein. Length = 364 Score = 28.3 bits (60), Expect = 2.5 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433 DKDGDG I+ EL M L TE E+ D I Sbjct: 289 DKDGDGFISVAELQAVMTNLQAWLTEEEIDDGI 321 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,201,229 Number of Sequences: 27780 Number of extensions: 58136 Number of successful extensions: 117 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 117 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 724655464 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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