Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D04f
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    66   1e-11
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    66   1e-11
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    55   3e-08
Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical pr...    55   3e-08
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        55   3e-08
AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-li...    55   3e-08
U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin rela...    51   3e-07
Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical pr...    46   9e-06
Z81120-4|CAB03346.1|  142|Caenorhabditis elegans Hypothetical pr...    37   0.005
U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified vi...    33   0.067
Z81568-13|CAH10811.1|  153|Caenorhabditis elegans Hypothetical p...    32   0.20 
AC084159-17|AAK39364.1|  116|Caenorhabditis elegans Hypothetical...    31   0.27 
Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical pr...    31   0.36 
U28731-1|AAA68298.1|  145|Caenorhabditis elegans Hypothetical pr...    31   0.36 
AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C pr...    31   0.36 
U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical pr...    31   0.47 
Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical pr...    30   0.62 
AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math ...    28   2.5  

>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +2

Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI
Sbjct: 18  SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53



 Score = 31.5 bits (68), Expect = 0.27
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDG+G I+  EL   M  LG+  T+ E+ +MI
Sbjct: 94  DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +2

Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           +L DKDGDGTITTKELGT MR LGQNPTEAEL DMI
Sbjct: 18  SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53



 Score = 31.5 bits (68), Expect = 0.27
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDG+G I+  EL   M  LG+  T+ E+ +MI
Sbjct: 94  DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           + DKDG+GTI+TKELG  MR LGQNPTE E+ +MI
Sbjct: 89  MFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMI 123



 Score = 29.9 bits (64), Expect = 0.82
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDG+G IT +E    M  +G   +E E+ +MI
Sbjct: 163 DKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMI 195


>Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical
           protein C18E9.1 protein.
          Length = 171

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           L DKDG+G+I++KELG  MR LGQNPTE EL DM+
Sbjct: 43  LFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMV 77


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           + DKDG+GTI+TKELG  MR LGQNPTE E+ +MI
Sbjct: 32  MFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMI 66



 Score = 29.9 bits (64), Expect = 0.82
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDG+G IT +E    M  +G   +E E+ +MI
Sbjct: 106 DKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMI 138


>AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-like
           protein protein.
          Length = 171

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           L DKDG+G+I++KELG  MR LGQNPTE EL DM+
Sbjct: 43  LFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMV 77


>U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin related
           genes protein 3 protein.
          Length = 164

 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           L DKDG+GTI+ KELG  MR LGQNPTE ++ ++I
Sbjct: 37  LFDKDGNGTISIKELGVAMRALGQNPTEQQMMEII 71


>Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical
           protein T07G12.1 protein.
          Length = 182

 Score = 46.4 bits (105), Expect = 9e-06
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           L DKDG+ T+  KELG  MR LG NPTE EL +M+
Sbjct: 31  LFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMV 65



 Score = 29.1 bits (62), Expect = 1.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDG+G IT +E    M  +G+  +E E+ ++I
Sbjct: 105 DKDGNGYITAQEFKHFMTTMGERFSEEEVDEII 137


>Z81120-4|CAB03346.1|  142|Caenorhabditis elegans Hypothetical
           protein T12D8.6 protein.
          Length = 142

 Score = 37.1 bits (82), Expect = 0.005
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +2

Query: 326 ALXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421
           A  D  GD  I+ +++G  +R LGQNPTEAE+
Sbjct: 12  AYFDSKGDERISVQQVGDVLRALGQNPTEAEI 43


>U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 2 protein.
          Length = 156

 Score = 33.5 bits (73), Expect = 0.067
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDM 430
           D +GDG I  +EL   M+ +GQ+PTE EL  M
Sbjct: 31  DLNGDGYIQREELRAVMQKMGQSPTEDELDAM 62


>Z81568-13|CAH10811.1|  153|Caenorhabditis elegans Hypothetical
           protein K08E3.10 protein.
          Length = 153

 Score = 31.9 bits (69), Expect = 0.20
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDM 430
           D  GDG I +K+L T +R +  NPTEA L ++
Sbjct: 18  DTLGDGKIDSKQLPTALRAMMLNPTEALLAEV 49


>AC084159-17|AAK39364.1|  116|Caenorhabditis elegans Hypothetical
           protein Y73B3A.12 protein.
          Length = 116

 Score = 31.5 bits (68), Expect = 0.27
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDG+G I+  EL   M  LG+  T+ E+ +MI
Sbjct: 43  DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 75


>Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical
           protein ZK673.7 protein.
          Length = 160

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           L DK+G+G I   +L   +R L  N +E EL +MI
Sbjct: 103 LYDKEGNGYINVSDLRDILRALDDNVSEEELDEMI 137



 Score = 26.6 bits (56), Expect = 7.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           + DK+G G I   ++G  +R +GQ   E +L  +I
Sbjct: 26  MFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLI 60


>U28731-1|AAA68298.1|  145|Caenorhabditis elegans Hypothetical
           protein F12A10.5 protein.
          Length = 145

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DK+GDG IT +EL   +  LG+  + +++  MI
Sbjct: 17  DKNGDGRITRQELEVALLQLGEKASNSKIETMI 49



 Score = 29.9 bits (64), Expect = 0.82
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DK+GDG I+  +L   M  LG+  TE E  +MI
Sbjct: 90  DKNGDGVISIDDLIFVMCQLGEKLTETEAKEMI 122


>AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C
           protein.
          Length = 160

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           L DK+G+G I   +L   +R L  N +E EL +MI
Sbjct: 103 LYDKEGNGYINVSDLRDILRALDDNVSEEELDEMI 137



 Score = 26.6 bits (56), Expect = 7.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           + DK+G G I   ++G  +R +GQ   E +L  +I
Sbjct: 26  MFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLI 60


>U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical
           protein K03A1.4a protein.
          Length = 264

 Score = 30.7 bits (66), Expect = 0.47
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAEL 421
           D + DG IT  EL   M+  GQ PT+ EL
Sbjct: 138 DANNDGRITIDELEKAMQKCGQKPTKLEL 166


>Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical
           protein F40F9.8 protein.
          Length = 137

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 329 LXDKDGDGTITTKELGTGMRXLGQNPTEAEL 421
           + D+D DG I T ++   +R  G NP++ EL
Sbjct: 1   MFDEDSDGLIETDDVSHVLRSFGLNPSQTEL 31


>AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math
           domain containingprotein 25 protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 335 DKDGDGTITTKELGTGMRXLGQNPTEAELPDMI 433
           DKDGDG I+  EL   M  L    TE E+ D I
Sbjct: 289 DKDGDGFISVAELQAVMTNLQAWLTEEEIDDGI 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,201,229
Number of Sequences: 27780
Number of extensions: 58136
Number of successful extensions: 117
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)