BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D03f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 30 0.98 12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 28 4.0 >01_05_0279 + 20318440-20318688,20318785-20318931,20319449-20319611, 20319770-20319887,20320607-20320676,20320774-20320854, 20320924-20320959,20321129-20321149,20321586-20321642, 20321716-20321827,20321905-20322178,20322454-20322556, 20323244-20323459,20324615-20324665,20325339-20327963 Length = 1440 Score = 30.3 bits (65), Expect = 0.98 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +3 Query: 147 FYSRF*VNSCADIV-LRNPKDFDLLTIKSFNHFFVSISSNTYVLVKM 284 F +RF + + ++ ++NPKD D ++ ++ NHF ++ S V KM Sbjct: 361 FITRFALANIVELYHIQNPKDTDFISAETANHFVYNLMSIRDVASKM 407 >12_02_0067 + 13144002-13144203,13144471-13144529,13144638-13144713, 13144802-13144873,13144969-13145056,13145365-13145601, 13145705-13145910,13145946-13146122,13146220-13146251, 13146330-13146432,13146547-13146815,13148029-13148175, 13148272-13148412,13148509-13148595,13148841-13148931, 13149093-13149192,13149292-13149352,13149442-13149663, 13149756-13149872,13149972-13150061,13150168-13150344 Length = 917 Score = 28.3 bits (60), Expect = 4.0 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +3 Query: 180 DIVLRNPKDFDLLTIKSF----NHFFVSISSNTYVL 275 +IV NPKDFD K+F HFF SI T L Sbjct: 837 EIVHYNPKDFDFGKKKAFPFRDQHFFASIEKATLEL 872 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,435,090 Number of Sequences: 37544 Number of extensions: 271232 Number of successful extensions: 497 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 489 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 497 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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