BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D03f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL033125-5|CAA21828.1| 959|Drosophila melanogaster EG:EG0007.12... 28 6.7 AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB ... 28 6.7 >AL033125-5|CAA21828.1| 959|Drosophila melanogaster EG:EG0007.12 protein. Length = 959 Score = 28.3 bits (60), Expect = 6.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 3 PGIADVPGDHLPSGGPYARLPT 68 P +D P D + SGG A+LPT Sbjct: 7 PSSSDTPADRVASGGAAAKLPT 28 >AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB protein. Length = 1911 Score = 28.3 bits (60), Expect = 6.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 3 PGIADVPGDHLPSGGPYARLPT 68 P +D P D + SGG A+LPT Sbjct: 7 PSSSDTPADRVASGGAAAKLPT 28 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,131,329 Number of Sequences: 53049 Number of extensions: 471875 Number of successful extensions: 772 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 766 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 772 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -