BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D03f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 31 0.38 U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical pr... 29 1.5 U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 27 6.2 Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 8.1 Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 8.1 >U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein F31E3.4 protein. Length = 1131 Score = 31.5 bits (68), Expect = 0.38 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 85 NKKNLFTFTQVNCSQSRYLDFFTQGSKLI 171 N KN T ++C Q + LDF QG+KLI Sbjct: 177 NSKNCETIHTLDCHQDQVLDFDVQGNKLI 205 >U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical protein F54E7.9 protein. Length = 167 Score = 29.5 bits (63), Expect = 1.5 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +3 Query: 93 KSVHIHTGQLFPISLPGFFYSRF*VNSCADIVLRNPKDFDLLTIKSFN 236 K+V I +FP+S FY N +V+RN + ++ +K N Sbjct: 31 KTVRILVSSIFPVSYSDKFYQECMNNELTGVVIRNGEAIAIVAVKPEN 78 >U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine receptor protein 10 protein. Length = 510 Score = 27.5 bits (58), Expect = 6.2 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 205 ILTS*L*KASIIFLFRFHQIRTYLLKCIDCALIRRRIPEST 327 +LT + K+ + RF Q Y+ KCID A +R+ ST Sbjct: 399 VLTKNVNKSHSLRSRRFTQFEKYIKKCIDDAKLRKNSTYST 439 >Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical protein K08E7.5c protein. Length = 896 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Frame = -1 Query: 521 CTVVPA-LSLPLCGNCPQ*PCAKFPQTCCR 435 C PA LP CP PC P+ CC+ Sbjct: 645 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQ 674 >Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical protein K08E7.5d protein. Length = 541 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Frame = -1 Query: 521 CTVVPA-LSLPLCGNCPQ*PCAKFPQTCCR 435 C PA LP CP PC P+ CC+ Sbjct: 290 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQ 319 >Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical protein K08E7.5b protein. Length = 493 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Frame = -1 Query: 521 CTVVPA-LSLPLCGNCPQ*PCAKFPQTCCR 435 C PA LP CP PC P+ CC+ Sbjct: 242 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQ 271 >Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein K08E7.5a protein. Length = 1221 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Frame = -1 Query: 521 CTVVPA-LSLPLCGNCPQ*PCAKFPQTCCR 435 C PA LP CP PC P+ CC+ Sbjct: 970 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQ 999 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,431,705 Number of Sequences: 27780 Number of extensions: 254545 Number of successful extensions: 548 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 522 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 548 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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