BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D03f (521 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.9 DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 3.3 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 4.4 DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 5.8 DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 5.8 AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 5.8 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 1.9 Identities = 8/25 (32%), Positives = 14/25 (56%) Frame = +1 Query: 409 RKTEIYQYILQHVCGNLAHGHWGQF 483 + +E Y+Y ++ +CGN H F Sbjct: 1585 KASEDYRYSVRGLCGNFDHDSTNDF 1609 >DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. Length = 120 Score = 22.2 bits (45), Expect = 3.3 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -1 Query: 521 CTVVPALSLPLCGNC 477 C V+ A + P+CG C Sbjct: 67 CPVLRAYTCPICGAC 81 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 21.8 bits (44), Expect = 4.4 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 454 NLAHGHWGQFPHNGR 498 +L H HW FP G+ Sbjct: 40 DLVHPHWRAFPAPGK 54 >DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 21.4 bits (43), Expect = 5.8 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +1 Query: 253 FHQIRTYLLKCIDCALIRRRIPESTGRRLKGRARQA 360 + + ++ + + +L+ I +T RRL+ RARQ+ Sbjct: 199 YSSLGSFFIPLLLMSLVYLEIYLATRRRLRERARQS 234 >DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 21.4 bits (43), Expect = 5.8 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +1 Query: 253 FHQIRTYLLKCIDCALIRRRIPESTGRRLKGRARQA 360 + + ++ + + +L+ I +T RRL+ RARQ+ Sbjct: 199 YSSLGSFFIPLLLMSLVYLEIYLATRRRLRERARQS 234 >AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled receptor protein. Length = 399 Score = 21.4 bits (43), Expect = 5.8 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +1 Query: 253 FHQIRTYLLKCIDCALIRRRIPESTGRRLKGRARQA 360 + + ++ + + +L+ I +T RRL+ RARQ+ Sbjct: 199 YSSLGSFFIPLLLMSLVYLEIYLATRRRLRERARQS 234 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 147,375 Number of Sequences: 438 Number of extensions: 2793 Number of successful extensions: 7 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14600229 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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