BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308D02f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_56628| Best HMM Match : Actin (HMM E-Value=0) 229 1e-60 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 2e-59 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 2e-59 SB_56| Best HMM Match : Actin (HMM E-Value=0) 223 7e-59 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 222 2e-58 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 9e-47 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09 SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 1e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 4e-08 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 52 2e-07 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 46 2e-05 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 36 0.015 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44 SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.44 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.44 SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.58 SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.58 SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58 SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76 SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.76 SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.76 SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.0 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0 SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.0 SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0 SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0 SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.0 SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.0 SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 29 2.3 SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 2.3 SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 2.3 SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 3.1 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1 SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 27 7.1 SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5) 27 7.1 SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1 SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1 SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1 SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 27 7.1 SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 9.4 SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 27 9.4 SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 27 9.4 SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 229 bits (560), Expect = 1e-60 Identities = 102/104 (98%), Positives = 104/104 (100%) Frame = +3 Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104 Score = 68.9 bits (161), Expect = 2e-12 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 146 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 225 bits (549), Expect = 2e-59 Identities = 101/104 (97%), Positives = 103/104 (99%) Frame = +3 Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104 Score = 68.9 bits (161), Expect = 2e-12 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 146 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 225 bits (549), Expect = 2e-59 Identities = 99/104 (95%), Positives = 103/104 (99%) Frame = +3 Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104 Score = 68.9 bits (161), Expect = 2e-12 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 146 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 223 bits (545), Expect = 7e-59 Identities = 100/102 (98%), Positives = 102/102 (100%) Frame = +3 Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 103 Score = 68.9 bits (161), Expect = 2e-12 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS Sbjct: 111 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 145 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 222 bits (542), Expect = 2e-58 Identities = 99/102 (97%), Positives = 102/102 (100%) Frame = +3 Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 103 Score = 68.9 bits (161), Expect = 2e-12 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS Sbjct: 111 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 145 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 183 bits (445), Expect = 9e-47 Identities = 83/89 (93%), Positives = 86/89 (96%) Frame = +3 Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 356 RGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 53.2 bits (122), Expect = 1e-07 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +2 Query: 428 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 N + M +IMFETFN+PAMYVAIQAVLSLYAS Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYAS 108 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 88.6 bits (210), Expect = 3e-18 Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 2/87 (2%) Frame = +3 Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 275 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66 Query: 276 ILTLKYPIEHGIVTNWDDMEKIWHHTF 356 +L + YP+++GIV NWDDM+ +W +TF Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTF 93 Score = 46.0 bits (104), Expect = 2e-05 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYA 517 +P NREKM ++MFE + +Y+AIQAVL+LYA Sbjct: 115 NPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYA 148 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 1e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +3 Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 59.7 bits (138), Expect = 1e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +3 Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 Score = 58.8 bits (136), Expect = 3e-09 Identities = 24/35 (68%), Positives = 31/35 (88%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +PK NRE+M Q+MFE+FN P MYVA+QAV++LYAS Sbjct: 2156 NPKMNRERMVQLMFESFNVPCMYVAVQAVMALYAS 2190 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 56.8 bits (131), Expect = 1e-08 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Frame = +3 Query: 78 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 248 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752 Query: 249 GDEAQSKRGILTL 287 GD A +K G++ L Sbjct: 753 GDAAVAKSGVMHL 765 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 54.8 bits (126), Expect = 4e-08 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +3 Query: 222 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 389 G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDH 332 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 52.4 bits (120), Expect = 2e-07 Identities = 20/35 (57%), Positives = 30/35 (85%) Frame = +2 Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 +P+ NREK ++ FETFN PA+++++QAVLSLYA+ Sbjct: 137 NPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 48.8 bits (111), Expect = 3e-06 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Frame = +3 Query: 96 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 275 ++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + + Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283 Query: 276 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 365 L Y P + G + NWD ++IW +TF E Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 46.0 bits (104), Expect = 2e-05 Identities = 21/24 (87%), Positives = 23/24 (95%) Frame = +2 Query: 449 IMFETFNTPAMYVAIQAVLSLYAS 520 IMFE FN+PA+YVAIQAVLSLYAS Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYAS 24 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 41.9 bits (94), Expect = 3e-04 Identities = 21/39 (53%), Positives = 27/39 (69%) Frame = -1 Query: 206 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 90 MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 36.3 bits (80), Expect = 0.015 Identities = 13/33 (39%), Positives = 24/33 (72%) Frame = +2 Query: 422 KXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520 + REK+T++MFE +N PA ++ +VL+ +A+ Sbjct: 46 RIKREKLTELMFEKYNVPAFFLCKNSVLTAFAN 78 Score = 27.5 bits (58), Expect = 7.1 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +3 Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395 PI+ G++ +WD EKI + + ++ HP+ Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPL 36 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.44 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPEPLSTT 110 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) Length = 272 Score = 31.5 bits (68), Expect = 0.44 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251 Query: 152 CETGLAHT 129 CET L T Sbjct: 252 CETQLVPT 259 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.44 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPEPLSTT 110 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_21074| Best HMM Match : NadA (HMM E-Value=2) Length = 358 Score = 31.1 bits (67), Expect = 0.58 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309 Query: 152 CETGLAHT 129 CET L T Sbjct: 310 CETQLVLT 317 >SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 402 Score = 31.1 bits (67), Expect = 0.58 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129 Query: 152 CETGLAHT 129 CET L T Sbjct: 130 CETQLVLT 137 >SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 458 Score = 31.1 bits (67), Expect = 0.58 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163 Query: 152 CETGLAHT 129 CET L T Sbjct: 164 CETQLVLT 171 >SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 30.7 bits (66), Expect = 0.76 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446 Query: 152 CETGLAHT 129 CET L T Sbjct: 447 CETQLVLT 454 >SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) Length = 339 Score = 30.7 bits (66), Expect = 0.76 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287 Query: 152 CETGLAHT 129 CET L T Sbjct: 288 CETQLVLT 295 >SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) Length = 570 Score = 30.7 bits (66), Expect = 0.76 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C ++LSH + H M D +HG RS S Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211 Query: 152 CETGLAHT 129 CET L T Sbjct: 212 CETQLVLT 219 >SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) Length = 419 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268 Query: 188 DRGEHGARSIISCETGLAHT 129 +HG R +SCET L T Sbjct: 269 SIFQHGFRQALSCETQLVLT 288 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.0 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPEPLSTT 110 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129 Query: 188 DRGEHGARSIISCETGLAHT 129 +HG R +SCET L T Sbjct: 130 SIFQHGFRQALSCETQLVLT 149 >SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2396 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667 Query: 188 DRGEHGARSIISCETGLAHT 129 +HG R +SCET L T Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687 >SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 859 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695 Query: 188 DRGEHGARSIISCETGLAHT 129 +HG R +SCET L T Sbjct: 696 SIFQHGFRQALSCETQLVLT 715 >SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) Length = 1492 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105 Query: 188 DRGEHGARSIISCETGLAHT 129 +HG R +SCET L T Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125 >SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 30.3 bits (65), Expect = 1.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129 Query: 188 DRGEHGARSIISCETGLAHT 129 +HG R +SCET L T Sbjct: 130 SIFQHGFRQALSCETQLVLT 149 >SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 29.9 bits (64), Expect = 1.3 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -1 Query: 263 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 129 +C V+LSH + H M D +HG RS SCET L T Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137 >SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1259 Score = 29.5 bits (63), Expect = 1.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 412 PSPQGQQREDDPDHVRNIQHARHVRRHPSR 501 P+P+ R D+P V A HV HPSR Sbjct: 266 PTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295 >SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) Length = 1592 Score = 29.1 bits (62), Expect = 2.3 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -1 Query: 410 SLSEQDWVFLGGDTQLIVEGMMPNLLHVI 324 SL++Q+W + D Q+IVEG M N ++I Sbjct: 1332 SLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360 >SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) Length = 329 Score = 29.1 bits (62), Expect = 2.3 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C ++LSH + H L A +HG R +S Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262 Query: 152 CETGLAHT 129 CET L T Sbjct: 263 CETQLVLT 270 >SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) Length = 452 Score = 29.1 bits (62), Expect = 2.3 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153 V+PV S D + S +C ++LSH + H L A +HG R +S Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60 Query: 152 CETGLAHT 129 CET L T Sbjct: 61 CETQLVLT 68 >SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) Length = 892 Score = 28.7 bits (61), Expect = 3.1 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = -1 Query: 269 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 105 FA CL + V+LSH + H L A +HG R+ SCET L H A + + Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520 Query: 104 GNFFVAHLE 78 G V L+ Sbjct: 521 GQVDVLLLD 529 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPEPLSTT 110 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1150 Score = 28.3 bits (60), Expect = 4.1 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Frame = +1 Query: 316 LTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLP---SPQGQQREDDPDHVRNIQHARHVR 486 L M WR S C + C RLP + QGQQ + P + Q A + Sbjct: 613 LAAMAWRPCPPSNSCYDCGEEGHFARECPKRLPPTSNQQGQQNQRRPPQAQQQQKAGNGS 672 Query: 487 RHPSRALAVRV 519 P A+ V++ Sbjct: 673 PLPQPAIKVKL 683 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPEPLSTT 110 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 285 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -2 Query: 196 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 86 L IE + A++P P + +P+ + +AAT +SH Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258 >SB_46036| Best HMM Match : PSRT (HMM E-Value=1) Length = 878 Score = 27.5 bits (58), Expect = 7.1 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 373 SPPRNTQSCSLRLPSPQGQQREDDPDHVRNIQHARHVRRH 492 SPP +S S R PSP ++R P R R V RH Sbjct: 559 SPPPRRRSPSPRRPSPSPRRRSTSPS--RKSPPPRRVHRH 596 >SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5) Length = 520 Score = 27.5 bits (58), Expect = 7.1 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +1 Query: 322 GMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPSPQGQQREDDPDHV 456 G T FG M PR+ Q C LRLP P+G Q H+ Sbjct: 448 GDTLATFGHCLVGMENDQVPRSGQRC-LRLPPPRGAQNRRGTHHI 491 >SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3142 Score = 27.5 bits (58), Expect = 7.1 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -1 Query: 263 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 129 LC + ++LSH + H L +HG R +SCET L T Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900 >SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 617 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -3 Query: 252 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 106 LL +S P +P+ RP GGA P++ ++ + N+ T+ PT Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142 >SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 221 Score = 27.5 bits (58), Expect = 7.1 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = -3 Query: 258 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 88 P L +P + RPS + S + LL RP TYR+ LP+ LL + Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187 >SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) Length = 1093 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 349 IPSTMSCVSPPRNT--QSCSLRLPSPQ 423 + S C+SPP+NT Q C +L SP+ Sbjct: 807 LESPKQCISPPKNTLKQVCPSQLESPK 833 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 349 IPSTMSCVSPPRNT--QSCSLRLPSPQ 423 + S C+SPP+NT Q C +L SP+ Sbjct: 829 LESPKQCISPPKNTLKQVCPSQLESPK 855 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 349 IPSTMSCVSPPRNT--QSCSLRLPSPQ 423 + S C+SPP+NT Q C +L SP+ Sbjct: 873 LESPKQCISPPKNTLKQVCPSQLESPK 899 >SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) Length = 766 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +3 Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 206 + +++D GS KAGFA ++A + + S++G H Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516 >SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) Length = 704 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/39 (30%), Positives = 18/39 (46%) Frame = +1 Query: 352 PSTMSCVSPPRNTQSCSLRLPSPQGQQREDDPDHVRNIQ 468 P+ + PP+N + L S +R PDH RN + Sbjct: 269 PARFQVIDPPKNAKPVFGELHSKPKPERPKIPDHNRNTE 307 >SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) Length = 563 Score = 27.1 bits (57), Expect = 9.4 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 450 SCSKHSTRPPCTSPSKPC 503 +C H+ R P T+PS PC Sbjct: 359 ACYSHARREPSTAPSLPC 376 >SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2323 Score = 27.1 bits (57), Expect = 9.4 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = -2 Query: 274 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 143 P C S P F +P P W LP+ E N G SS A P Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,745,122 Number of Sequences: 59808 Number of extensions: 455806 Number of successful extensions: 1458 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 1282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1452 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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