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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308D02f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      229   1e-60
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             225   2e-59
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              225   2e-59
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         223   7e-59
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              222   2e-58
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             183   9e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              89   3e-18
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   1e-09
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          60   1e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 57   1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               55   4e-08
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             52   2e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  49   3e-06
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     46   2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   3e-04
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  36   0.015
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.44 
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      31   0.44 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.44 
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        31   0.58 
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)                       31   0.58 
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.58 
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.76 
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    31   0.76 
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    31   0.76 
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)                    30   1.0  
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              30   1.0  
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.0  
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 30   1.0  
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              30   1.0  
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)          29   2.3  
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)                   29   2.3  
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)                 29   2.3  
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)                 29   3.1  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_46036| Best HMM Match : PSRT (HMM E-Value=1)                        27   7.1  
SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5)                    27   7.1  
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)               27   7.1  
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  27   9.4  
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)                       27   9.4  
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)                    27   9.4  
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   9.4  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  229 bits (560), Expect = 1e-60
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = +3

Query: 84  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104



 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 146


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  225 bits (549), Expect = 2e-59
 Identities = 101/104 (97%), Positives = 103/104 (99%)
 Frame = +3

Query: 84  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104



 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 146


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  225 bits (549), Expect = 2e-59
 Identities = 99/104 (95%), Positives = 103/104 (99%)
 Frame = +3

Query: 84  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104



 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 146


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  223 bits (545), Expect = 7e-59
 Identities = 100/102 (98%), Positives = 102/102 (100%)
 Frame = +3

Query: 90  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 103



 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 111 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 145


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  222 bits (542), Expect = 2e-58
 Identities = 99/102 (97%), Positives = 102/102 (100%)
 Frame = +3

Query: 90  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 103



 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +PK NREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 111 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 145


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  183 bits (445), Expect = 9e-47
 Identities = 83/89 (93%), Positives = 86/89 (96%)
 Frame = +3

Query: 90  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 356
           RGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 428 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           N + M +IMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYAS 108


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +3

Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 275
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R 
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 276 ILTLKYPIEHGIVTNWDDMEKIWHHTF 356
           +L + YP+++GIV NWDDM+ +W +TF
Sbjct: 67  MLEVNYPMDNGIVRNWDDMKHVWDYTF 93



 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYA 517
           +P  NREKM ++MFE +    +Y+AIQAVL+LYA
Sbjct: 115 NPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYA 148


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +3

Query: 93   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +3

Query: 108  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = +2

Query: 416  HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
            +PK NRE+M Q+MFE+FN P MYVA+QAV++LYAS
Sbjct: 2156 NPKMNRERMVQLMFESFNVPCMYVAVQAVMALYAS 2190


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +3

Query: 78  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 248
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G  +  KD    
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752

Query: 249 GDEAQSKRGILTL 287
           GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 24/56 (42%), Positives = 32/56 (57%)
 Frame = +3

Query: 222 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 389
           G+   D ++GDEA  K    T K+PI H IV +WD ME+ W    +  LR  PE+H
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDH 332


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 30/35 (85%)
 Frame = +2

Query: 416 HPKXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +P+ NREK  ++ FETFN PA+++++QAVLSLYA+
Sbjct: 137 NPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
 Frame = +3

Query: 96  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 275
           ++A LV+D G+   K GFA + APR++ P+ + + + +       ++  ++GD+ +  + 
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283

Query: 276 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 365
              L Y  P + G + NWD  ++IW +TF  E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +2

Query: 449 IMFETFNTPAMYVAIQAVLSLYAS 520
           IMFE FN+PA+YVAIQAVLSLYAS
Sbjct: 1   IMFEAFNSPAVYVAIQAVLSLYAS 24


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -1

Query: 206 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 90
           MA  + D GE+G+ SI+S ETGLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 36.3 bits (80), Expect = 0.015
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +2

Query: 422 KXNREKMTQIMFETFNTPAMYVAIQAVLSLYAS 520
           +  REK+T++MFE +N PA ++   +VL+ +A+
Sbjct: 46  RIKREKLTELMFEKYNVPAFFLCKNSVLTAFAN 78



 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
           PI+ G++ +WD  EKI  + +   ++     HP+
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPL 36


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 252 CETQLVPT 259


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 310 CETQLVLT 317


>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 402

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 71  VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 130 CETQLVLT 137


>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 164 CETQLVLT 171


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 447 CETQLVLT 454


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      V+LSH + H  M     D  +HG RS  S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 288 CETQLVLT 295


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      ++LSH + H  M     D  +HG RS  S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 212 CETQLVLT 219


>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
          Length = 419

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268

Query: 188 DRGEHGARSIISCETGLAHT 129
              +HG R  +SCET L  T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 71  EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129

Query: 188 DRGEHGARSIISCETGLAHT 129
              +HG R  +SCET L  T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149


>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2396

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 356  EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
            EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667

Query: 188  DRGEHGARSIISCETGLAHT 129
               +HG R  +SCET L  T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687


>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695

Query: 188 DRGEHGARSIISCETGLAHT 129
              +HG R  +SCET L  T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 356  EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
            EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105

Query: 188  DRGEHGARSIISCETGLAHT 129
               +HG R  +SCET L  T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125


>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
           EG +P +     V+PV   S  D     +  S   +C      ++LSH + H L A    
Sbjct: 71  EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129

Query: 188 DRGEHGARSIISCETGLAHT 129
              +HG R  +SCET L  T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149


>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 263 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 129
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 94  ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1259

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 412 PSPQGQQREDDPDHVRNIQHARHVRRHPSR 501
           P+P+   R D+P  V     A HV  HPSR
Sbjct: 266 PTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295


>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
          Length = 1592

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 410  SLSEQDWVFLGGDTQLIVEGMMPNLLHVI 324
            SL++Q+W +   D Q+IVEG M N  ++I
Sbjct: 1332 SLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360


>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
          Length = 329

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      ++LSH + H L A       +HG R  +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 263 CETQLVLT 270


>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
          Length = 452

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
           V+PV   S  D     +  S   +C      ++LSH + H L A       +HG R  +S
Sbjct: 2   VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60

Query: 152 CETGLAHT 129
           CET L  T
Sbjct: 61  CETQLVLT 68


>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
          Length = 892

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = -1

Query: 269 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 105
           FA CL   +   V+LSH + H L A       +HG R+  SCET L    H  A +  + 
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520

Query: 104 GNFFVAHLE 78
           G   V  L+
Sbjct: 521 GQVDVLLLD 529


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1150

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
 Frame = +1

Query: 316 LTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLP---SPQGQQREDDPDHVRNIQHARHVR 486
           L  M WR      S   C       + C  RLP   + QGQQ +  P   +  Q A +  
Sbjct: 613 LAAMAWRPCPPSNSCYDCGEEGHFARECPKRLPPTSNQQGQQNQRRPPQAQQQQKAGNGS 672

Query: 487 RHPSRALAVRV 519
             P  A+ V++
Sbjct: 673 PLPQPAIKVKL 683


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 285

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 196 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 86
           L  IE +    A++P  P + +P+ +   +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258


>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
          Length = 878

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +1

Query: 373 SPPRNTQSCSLRLPSPQGQQREDDPDHVRNIQHARHVRRH 492
           SPP   +S S R PSP  ++R   P   R     R V RH
Sbjct: 559 SPPPRRRSPSPRRPSPSPRRRSTSPS--RKSPPPRRVHRH 596


>SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5)
          Length = 520

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 322 GMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPSPQGQQREDDPDHV 456
           G T   FG     M     PR+ Q C LRLP P+G Q      H+
Sbjct: 448 GDTLATFGHCLVGMENDQVPRSGQRC-LRLPPPRGAQNRRGTHHI 491


>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3142

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 263 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 129
           LC  +   ++LSH + H L         +HG R  +SCET L  T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900


>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 617

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -3

Query: 252 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 106
           LL +S   P +P+  RP GGA P++    ++   +  N+  T+      PT
Sbjct: 92  LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142


>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 221

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -3

Query: 258 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 88
           P  L  +P +  RPS      +  S  +      LL  RP TYR+   LP+  LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187


>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
          Length = 1093

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +1

Query: 349 IPSTMSCVSPPRNT--QSCSLRLPSPQ 423
           + S   C+SPP+NT  Q C  +L SP+
Sbjct: 807 LESPKQCISPPKNTLKQVCPSQLESPK 833



 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +1

Query: 349 IPSTMSCVSPPRNT--QSCSLRLPSPQ 423
           + S   C+SPP+NT  Q C  +L SP+
Sbjct: 829 LESPKQCISPPKNTLKQVCPSQLESPK 855



 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +1

Query: 349 IPSTMSCVSPPRNT--QSCSLRLPSPQ 423
           + S   C+SPP+NT  Q C  +L SP+
Sbjct: 873 LESPKQCISPPKNTLKQVCPSQLESPK 899


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 206
           + +++D GS   KAGFA ++A +  + S++G   H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516


>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
          Length = 704

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 352 PSTMSCVSPPRNTQSCSLRLPSPQGQQREDDPDHVRNIQ 468
           P+    + PP+N +     L S    +R   PDH RN +
Sbjct: 269 PARFQVIDPPKNAKPVFGELHSKPKPERPKIPDHNRNTE 307


>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
          Length = 563

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 450 SCSKHSTRPPCTSPSKPC 503
           +C  H+ R P T+PS PC
Sbjct: 359 ACYSHARREPSTAPSLPC 376


>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2323

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 274  PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 143
            P   C S P    F  +P   P W  LP+ E N   G SS A P
Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,745,122
Number of Sequences: 59808
Number of extensions: 455806
Number of successful extensions: 1458
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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