Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308C12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...    93   2e-19
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...    93   2e-19
BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p pro...    29   3.8  
AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p pro...    29   5.1  
AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17...    29   5.1  
AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA...    29   5.1  
AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA...    29   5.1  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/111 (40%), Positives = 60/111 (54%)
 Frame = +2

Query: 2   RRRPVPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISR 181
           RRRPV    ++ +GPDKFSFPSGHASRA  +         + IIF  P+ AW VSV+ISR
Sbjct: 94  RRRPVASKDMLTIGPDKFSFPSGHASRAFFVLLFFAKLYPLHIIFLMPVTAWAVSVAISR 153

Query: 182 VLAERHYLLDSXXXXXXXXLEGLFMSLIWXXXXXXXXXXXXXXDEKLDGGE 334
           ++ +RHY+LD         LE L + L+W              +E +D  E
Sbjct: 154 LILQRHYILDICAGAAIGVLEALIVGLLWISEETAFSIVGFVTEETVDSME 204


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/111 (40%), Positives = 60/111 (54%)
 Frame = +2

Query: 2   RRRPVPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISR 181
           RRRPV    ++ +GPDKFSFPSGHASRA  +         + IIF  P+ AW VSV+ISR
Sbjct: 94  RRRPVASKDMLTIGPDKFSFPSGHASRAFFVLLFFAKLYPLHIIFLMPVTAWAVSVAISR 153

Query: 182 VLAERHYLLDSXXXXXXXXLEGLFMSLIWXXXXXXXXXXXXXXDEKLDGGE 334
           ++ +RHY+LD         LE L + L+W              +E +D  E
Sbjct: 154 LILQRHYILDICAGAAIGVLEALIVGLLWISEETAFSIVGFVTEETVDSME 204


>BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p
           protein.
          Length = 141

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = +2

Query: 68  GHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISRVL 187
           GHA+RA+++  I+I    V+I+    L+A +V+  ++R+L
Sbjct: 16  GHAARAIVLIVIIILLVVVAILRIIVLVAVIVATILARLL 55


>AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p
           protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 230 YPHLLCCPVDSDVQP 186
           YPHLL CPV S++ P
Sbjct: 197 YPHLLSCPVPSELPP 211


>AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17.3
           protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 230 YPHLLCCPVDSDVQP 186
           YPHLL CPV S++ P
Sbjct: 197 YPHLLSCPVPSELPP 211


>AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA
           protein.
          Length = 588

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 230 YPHLLCCPVDSDVQP 186
           YPHLL CPV S++ P
Sbjct: 197 YPHLLSCPVPSELPP 211


>AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA
           protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = +2

Query: 23  NKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPL-------MAWVVSVSISR 181
           N  +EV PD+F  P  +      I  + +Y D V ++ YP         M W++   +  
Sbjct: 24  NCFVEVLPDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRTGSTWAQEMVWLLGHQLDY 83

Query: 182 VLAERHYLLDS 214
           V AE+   L S
Sbjct: 84  VAAEQDLRLRS 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,618,538
Number of Sequences: 53049
Number of extensions: 441758
Number of successful extensions: 946
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)