BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308C12f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY075278-1|AAL68145.1| 204|Drosophila melanogaster AT30094p pro... 93 2e-19 AE014134-1795|AAN10729.1| 204|Drosophila melanogaster CG31717-P... 93 2e-19 BT024276-1|ABC86338.1| 141|Drosophila melanogaster IP14648p pro... 29 3.8 AY089585-1|AAL90323.1| 588|Drosophila melanogaster RE12138p pro... 29 5.1 AL121806-4|CAB65881.1| 588|Drosophila melanogaster EG:BACR42I17... 29 5.1 AE014298-155|AAF45587.1| 588|Drosophila melanogaster CG11384-PA... 29 5.1 AE014297-888|AAF54344.1| 316|Drosophila melanogaster CG16733-PA... 29 5.1 >AY075278-1|AAL68145.1| 204|Drosophila melanogaster AT30094p protein. Length = 204 Score = 93.1 bits (221), Expect = 2e-19 Identities = 45/111 (40%), Positives = 60/111 (54%) Frame = +2 Query: 2 RRRPVPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISR 181 RRRPV ++ +GPDKFSFPSGHASRA + + IIF P+ AW VSV+ISR Sbjct: 94 RRRPVASKDMLTIGPDKFSFPSGHASRAFFVLLFFAKLYPLHIIFLMPVTAWAVSVAISR 153 Query: 182 VLAERHYLLDSXXXXXXXXLEGLFMSLIWXXXXXXXXXXXXXXDEKLDGGE 334 ++ +RHY+LD LE L + L+W +E +D E Sbjct: 154 LILQRHYILDICAGAAIGVLEALIVGLLWISEETAFSIVGFVTEETVDSME 204 >AE014134-1795|AAN10729.1| 204|Drosophila melanogaster CG31717-PA protein. Length = 204 Score = 93.1 bits (221), Expect = 2e-19 Identities = 45/111 (40%), Positives = 60/111 (54%) Frame = +2 Query: 2 RRRPVPMNKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISR 181 RRRPV ++ +GPDKFSFPSGHASRA + + IIF P+ AW VSV+ISR Sbjct: 94 RRRPVASKDMLTIGPDKFSFPSGHASRAFFVLLFFAKLYPLHIIFLMPVTAWAVSVAISR 153 Query: 182 VLAERHYLLDSXXXXXXXXLEGLFMSLIWXXXXXXXXXXXXXXDEKLDGGE 334 ++ +RHY+LD LE L + L+W +E +D E Sbjct: 154 LILQRHYILDICAGAAIGVLEALIVGLLWISEETAFSIVGFVTEETVDSME 204 >BT024276-1|ABC86338.1| 141|Drosophila melanogaster IP14648p protein. Length = 141 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/40 (35%), Positives = 27/40 (67%) Frame = +2 Query: 68 GHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISRVL 187 GHA+RA+++ I+I V+I+ L+A +V+ ++R+L Sbjct: 16 GHAARAIVLIVIIILLVVVAILRIIVLVAVIVATILARLL 55 >AY089585-1|AAL90323.1| 588|Drosophila melanogaster RE12138p protein. Length = 588 Score = 28.7 bits (61), Expect = 5.1 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 Query: 230 YPHLLCCPVDSDVQP 186 YPHLL CPV S++ P Sbjct: 197 YPHLLSCPVPSELPP 211 >AL121806-4|CAB65881.1| 588|Drosophila melanogaster EG:BACR42I17.3 protein. Length = 588 Score = 28.7 bits (61), Expect = 5.1 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 Query: 230 YPHLLCCPVDSDVQP 186 YPHLL CPV S++ P Sbjct: 197 YPHLLSCPVPSELPP 211 >AE014298-155|AAF45587.1| 588|Drosophila melanogaster CG11384-PA protein. Length = 588 Score = 28.7 bits (61), Expect = 5.1 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 Query: 230 YPHLLCCPVDSDVQP 186 YPHLL CPV S++ P Sbjct: 197 YPHLLSCPVPSELPP 211 >AE014297-888|AAF54344.1| 316|Drosophila melanogaster CG16733-PA protein. Length = 316 Score = 28.7 bits (61), Expect = 5.1 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = +2 Query: 23 NKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPL-------MAWVVSVSISR 181 N +EV PD+F P + I + +Y D V ++ YP M W++ + Sbjct: 24 NCFVEVLPDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRTGSTWAQEMVWLLGHQLDY 83 Query: 182 VLAERHYLLDS 214 V AE+ L S Sbjct: 84 VAAEQDLRLRS 94 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,618,538 Number of Sequences: 53049 Number of extensions: 441758 Number of successful extensions: 946 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 924 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 946 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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