BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308C11f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 179 1e-45 11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 179 1e-45 03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 179 1e-45 03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 93 2e-19 07_03_1357 - 25982861-25983068,25983354-25983361 61 5e-10 04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 32 0.24 06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 2.3 02_05_1008 - 33461225-33462334 29 2.3 10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 3.0 03_06_0069 - 31449319-31450368 28 4.0 07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 6.9 >11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 Length = 195 Score = 179 bits (436), Expect = 1e-45 Identities = 84/115 (73%), Positives = 100/115 (86%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH Sbjct: 67 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 126 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 66 AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K Sbjct: 127 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 181 >11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 Length = 218 Score = 179 bits (436), Expect = 1e-45 Identities = 84/115 (73%), Positives = 100/115 (86%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH Sbjct: 90 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 149 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 66 AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K Sbjct: 150 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 204 >03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004, 2963141-2963386,2967246-2967491,2968837-2968888, 2969270-2969651,2970527-2970681,2971389-2971713, 2975803-2975871,2976189-2976346,2976444-2976551, 2976659-2977131 Length = 781 Score = 179 bits (436), Expect = 1e-45 Identities = 84/115 (73%), Positives = 100/115 (86%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH Sbjct: 283 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 342 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 66 AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K Sbjct: 343 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 397 >03_03_0147 + 14838707-14838734,14839316-14839430,14839464-14839697, 14840571-14840667 Length = 157 Score = 92.7 bits (220), Expect = 2e-19 Identities = 44/70 (62%), Positives = 53/70 (75%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 K+P+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH Sbjct: 56 KNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHH 115 Query: 230 ARILIRQRHI 201 +LIRQ HI Sbjct: 116 DHVLIRQHHI 125 >07_03_1357 - 25982861-25983068,25983354-25983361 Length = 71 Score = 61.3 bits (142), Expect = 5e-10 Identities = 30/42 (71%), Positives = 33/42 (78%) Frame = -1 Query: 200 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKN 75 RV +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN 44 >04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 Length = 157 Score = 32.3 bits (70), Expect = 0.24 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -1 Query: 284 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 159 RRL T + K A+ + A I+Q H+RV + V P+F+V Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123 >06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404, 2358638-2358715,2359298-2359360,2359459-2359561, 2359675-2359800,2360212-2360258,2361284-2361388, 2361483-2361605,2361759-2361854,2362052-2362141, 2362759-2362815,2362899-2363028,2363613-2363708, 2363815-2363875,2364391-2364490 Length = 571 Score = 29.1 bits (62), Expect = 2.3 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -3 Query: 285 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 157 A+S G SW CQ++DPAK Y+ Q H I+ A Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435 >02_05_1008 - 33461225-33462334 Length = 369 Score = 29.1 bits (62), Expect = 2.3 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = -1 Query: 341 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 162 E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS + Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216 Query: 161 VRLDSGKHIDFSLKSPFGGGR 99 + +DSG+ + + FG GR Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233 >10_06_0085 + 10511258-10512327,10512978-10513058,10513318-10513396, 10514160-10514201 Length = 423 Score = 28.7 bits (61), Expect = 3.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 302 IEDFLERRLQTQVFKAGLAKSIHHAR 225 +ED+ E L T F A L KS+H AR Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135 >03_06_0069 - 31449319-31450368 Length = 349 Score = 28.3 bits (60), Expect = 4.0 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +2 Query: 230 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 361 HD +S G L P+SA +P + SDQ H VS+ P Y+ Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279 >07_03_0696 - 20754773-20754821,20754930-20755028,20755107-20755226, 20755317-20755402,20756013-20756109,20756181-20756268, 20756358-20756454,20756797-20756892,20757029-20757125, 20757571-20757689,20758559-20758616,20758751-20758857 Length = 370 Score = 27.5 bits (58), Expect = 6.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 361 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 275 FV +W + + M LV RL TSW+VVC Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,658,449 Number of Sequences: 37544 Number of extensions: 322487 Number of successful extensions: 936 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 913 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 936 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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