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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308C11f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192    179   1e-45
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511    179   1e-45
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296...   179   1e-45
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396...    93   2e-19
07_03_1357 - 25982861-25983068,25983354-25983361                       61   5e-10
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028     32   0.24 
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235...    29   2.3  
02_05_1008 - 33461225-33462334                                         29   2.3  
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133...    29   3.0  
03_06_0069 - 31449319-31450368                                         28   4.0  
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552...    27   6.9  

>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
          Length = 195

 Score =  179 bits (436), Expect = 1e-45
 Identities = 84/115 (73%), Positives = 100/115 (86%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH
Sbjct: 67  KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 126

Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 66
           AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 127 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 181


>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
          Length = 218

 Score =  179 bits (436), Expect = 1e-45
 Identities = 84/115 (73%), Positives = 100/115 (86%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH
Sbjct: 90  KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 149

Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 66
           AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 150 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 204


>03_01_0382 +
           2961665-2961672,2962504-2962557,2962935-2963004,
           2963141-2963386,2967246-2967491,2968837-2968888,
           2969270-2969651,2970527-2970681,2971389-2971713,
           2975803-2975871,2976189-2976346,2976444-2976551,
           2976659-2977131
          Length = 781

 Score =  179 bits (436), Expect = 1e-45
 Identities = 84/115 (73%), Positives = 100/115 (86%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           K+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHH
Sbjct: 283 KNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHH 342

Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 66
           AR+LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 343 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 397


>03_03_0147 +
           14838707-14838734,14839316-14839430,14839464-14839697,
           14840571-14840667
          Length = 157

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 44/70 (62%), Positives = 53/70 (75%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           K+P+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G  KSIHH
Sbjct: 56  KNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHH 115

Query: 230 ARILIRQRHI 201
             +LIRQ HI
Sbjct: 116 DHVLIRQHHI 125


>07_03_1357 - 25982861-25983068,25983354-25983361
          Length = 71

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = -1

Query: 200 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKN 75
           RV +Q+VNIPSFIVRL+S KHI FSL SP GG    RVKRKN
Sbjct: 3   RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN 44


>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
          Length = 157

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 284 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 159
           RRL T + K   A+ +  A   I+Q H+RV  + V  P+F+V
Sbjct: 82  RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123


>06_01_0324 -
           2357432-2357724,2358042-2358105,2358321-2358404,
           2358638-2358715,2359298-2359360,2359459-2359561,
           2359675-2359800,2360212-2360258,2361284-2361388,
           2361483-2361605,2361759-2361854,2362052-2362141,
           2362759-2362815,2362899-2363028,2363613-2363708,
           2363815-2363875,2364391-2364490
          Length = 571

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 285 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 157
           A+S   G  SW       CQ++DPAK Y+  Q    H  I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435


>02_05_1008 - 33461225-33462334
          Length = 369

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 24/81 (29%), Positives = 44/81 (54%)
 Frame = -1

Query: 341 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 162
           E Q+ L+Y+ G  +E    RR+ ++ F A +A+ +      + +RHI V + +   PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216

Query: 161 VRLDSGKHIDFSLKSPFGGGR 99
           + +DSG+ +     + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233


>10_06_0085 +
           10511258-10512327,10512978-10513058,10513318-10513396,
           10514160-10514201
          Length = 423

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 302 IEDFLERRLQTQVFKAGLAKSIHHAR 225
           +ED+ E  L T  F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135


>03_06_0069 - 31449319-31450368
          Length = 349

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 230 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 361
           HD  +S G L  P+SA  +P +   SDQ H  VS+   P   Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279


>07_03_0696 -
           20754773-20754821,20754930-20755028,20755107-20755226,
           20755317-20755402,20756013-20756109,20756181-20756268,
           20756358-20756454,20756797-20756892,20757029-20757125,
           20757571-20757689,20758559-20758616,20758751-20758857
          Length = 370

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 361 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 275
           FV  +W   + +  M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,658,449
Number of Sequences: 37544
Number of extensions: 322487
Number of successful extensions: 936
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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