BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308C11f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58 U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 217 1e-56 AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 214 2e-55 BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 196 4e-50 BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 40 0.005 BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 40 0.005 AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 40 0.005 AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 40 0.005 AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 40 0.005 AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 31 3.2 BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 5.7 AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 5.7 AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 5.7 >BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 224 bits (547), Expect = 2e-58 Identities = 106/117 (90%), Positives = 113/117 (96%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182 >U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 217 bits (531), Expect = 1e-56 Identities = 104/117 (88%), Positives = 111/117 (94%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQ 182 >AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA sequence from clone RP11-12M9 on chromosome 22. ). Length = 194 Score = 214 bits (522), Expect = 2e-55 Identities = 103/117 (88%), Positives = 109/117 (93%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 KDP+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 66 KDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60 AR+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPGRVKRKN +KGQ Sbjct: 126 ARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQ 182 >BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. Length = 113 Score = 196 bits (478), Expect = 4e-50 Identities = 93/103 (90%), Positives = 100/103 (97%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 +DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64 Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 102 AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107 >BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) protein. Length = 184 Score = 39.9 bits (89), Expect = 0.005 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 +D R+ ALL +L +G++ + L+ + F RRL T + K +A+ + Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126 Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159 A + Q H+RV VV P+F+V Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150 >BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) protein. Length = 184 Score = 39.9 bits (89), Expect = 0.005 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 +D R+ ALL +L +G++ + L+ + F RRL T + K +A+ + Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126 Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159 A + Q H+RV VV P+F+V Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150 >AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. Length = 184 Score = 39.9 bits (89), Expect = 0.005 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 +D R+ ALL +L +G++ + L+ + F RRL T + K +A+ + Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126 Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159 A + Q H+RV VV P+F+V Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150 >AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 homolog protein. Length = 184 Score = 39.9 bits (89), Expect = 0.005 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 +D R+ ALL +L +G++ + L+ + F RRL T + K +A+ + Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126 Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159 A + Q H+RV VV P+F+V Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150 >AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens cDNA FLJ10968 fis, clone PLACE1000863, moderately similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN YHR148W. ). Length = 184 Score = 39.9 bits (89), Expect = 0.005 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -1 Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231 +D R+ ALL +L +G++ + L+ + F RRL T + K +A+ + Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126 Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159 A + Q H+RV VV P+F+V Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150 >AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens cDNA FLJ46249 fis, clone TESTI4021377. ). Length = 222 Score = 30.7 bits (66), Expect = 3.2 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = -3 Query: 204 YSCPQASCEHPIIYCAPGLWQAH*LLSEISIRWRSSWTCQ 85 +SCP A P+ + PG W +S W +W CQ Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQ 178 >BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 protein. Length = 783 Score = 29.9 bits (64), Expect = 5.7 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -3 Query: 288 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 148 G S G + VHP+CQ ++ P+ AY P + HP+I PGL Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706 >AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens cDNA FLJ20315 fis, clone HEP07873. ). Length = 783 Score = 29.9 bits (64), Expect = 5.7 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -3 Query: 288 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 148 G S G + VHP+CQ ++ P+ AY P + HP+I PGL Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706 >AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. Length = 783 Score = 29.9 bits (64), Expect = 5.7 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -3 Query: 288 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 148 G S G + VHP+CQ ++ P+ AY P + HP+I PGL Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 77,497,494 Number of Sequences: 237096 Number of extensions: 1817857 Number of successful extensions: 4472 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4217 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4472 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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