Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308C11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 224 2e-58
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 217 1e-56
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 214 2e-55
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 196 4e-50
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 40 0.005
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 40 0.005
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 40 0.005
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 40 0.005
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 40 0.005
AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 31 3.2
BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 5.7
AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 5.7
AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 5.7
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 224 bits (547), Expect = 2e-58
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 217 bits (531), Expect = 1e-56
Identities = 104/117 (88%), Positives = 111/117 (94%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQ 182
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 214 bits (522), Expect = 2e-55
Identities = 103/117 (88%), Positives = 109/117 (93%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
KDP+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 66 KDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 125
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
AR+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPGRVKRKN +KGQ
Sbjct: 126 ARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQ 182
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 196 bits (478), Expect = 4e-50
Identities = 93/103 (90%), Positives = 100/103 (97%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 102
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 39.9 bits (89), Expect = 0.005
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
+D R+ ALL +L +G++ + L+ + F RRL T + K +A+ +
Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126
Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159
A + Q H+RV VV P+F+V
Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 39.9 bits (89), Expect = 0.005
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
+D R+ ALL +L +G++ + L+ + F RRL T + K +A+ +
Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126
Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159
A + Q H+RV VV P+F+V
Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 39.9 bits (89), Expect = 0.005
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
+D R+ ALL +L +G++ + L+ + F RRL T + K +A+ +
Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126
Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159
A + Q H+RV VV P+F+V
Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 39.9 bits (89), Expect = 0.005
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
+D R+ ALL +L +G++ + L+ + F RRL T + K +A+ +
Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126
Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159
A + Q H+RV VV P+F+V
Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 39.9 bits (89), Expect = 0.005
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = -1
Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
+D R+ ALL +L +G++ + L+ + F RRL T + K +A+ +
Sbjct: 68 RDQFRVRASAALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQA 126
Query: 230 ARILIRQRHIRVRKQVVNIPSFIV 159
A + Q H+RV VV P+F+V
Sbjct: 127 AVAFVEQGHVRVGPDVVTDPAFLV 150
>AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ46249 fis, clone TESTI4021377. ).
Length = 222
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 204 YSCPQASCEHPIIYCAPGLWQAH*LLSEISIRWRSSWTCQ 85
+SCP A P+ + PG W +S W +W CQ
Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQ 178
>BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43
protein.
Length = 783
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 288 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 148
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens
cDNA FLJ20315 fis, clone HEP07873. ).
Length = 783
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 288 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 148
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein.
Length = 783
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 288 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 148
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,497,494
Number of Sequences: 237096
Number of extensions: 1817857
Number of successful extensions: 4472
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4472
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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