Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308C11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   223   9e-59
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   223   9e-59
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   135   3e-32
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   135   3e-32
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...    71   7e-13
AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...    38   0.011
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...    38   0.011
AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p pro...    29   2.9  
AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA...    29   2.9  
AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precurs...    29   3.8  
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA...    29   3.8  
AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...    29   5.1  
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...    29   5.1  
AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-P...    29   5.1  
AY058781-1|AAL14010.1|  585|Drosophila melanogaster SD07191p pro...    28   6.7  
AE014296-3712|AAF51856.1|  585|Drosophila melanogaster CG11238-P...    28   6.7  
AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p pro...    28   8.8  
AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-P...    28   8.8  

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  223 bits (546), Expect = 9e-59
 Identities = 107/117 (91%), Positives = 112/117 (95%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           KD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHH 126

Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
           AR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K Q
Sbjct: 127 ARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  223 bits (546), Expect = 9e-59
 Identities = 107/117 (91%), Positives = 112/117 (95%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           KD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHH 126

Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 60
           AR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K Q
Sbjct: 127 ARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  135 bits (327), Expect = 3e-32
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           KD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHH 126

Query: 230 ARILIRQRHIR 198
           AR+LIRQRHIR
Sbjct: 127 ARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  135 bits (327), Expect = 3e-32
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           KD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHH 126

Query: 230 ARILIRQRHIR 198
           AR+LIRQRHIR
Sbjct: 127 ARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score = 71.3 bits (167), Expect = 7e-13
 Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = -1

Query: 410 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 231
           KD KRLF+G +L+RRLVRIGVL     +     G +    L         +AGLAKSIHH
Sbjct: 66  KDAKRLFQGKSLVRRLVRIGVLKSPH-EARLRAGSEDSGLLGASSADAGVQAGLAKSIHH 124

Query: 230 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHI-DFSLKSPFGGGRPGRVKRK 78
           AR+LIRQR   +  +   IPSF+V     +   +FSLK P    RP R +++
Sbjct: 125 ARVLIRQRTFVLASRWSTIPSFVVTPGLPEATSNFSLKMPL-RTRPSRSRQE 175


>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 21/73 (28%), Positives = 39/73 (53%)
 Frame = -1

Query: 377 LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 198
           LL +L  +GV ++ Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+R
Sbjct: 78  LLNKLHAMGVSND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVR 136

Query: 197 VRKQVVNIPSFIV 159
           V  +++  P+F+V
Sbjct: 137 VGPEMIKDPAFLV 149


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 21/73 (28%), Positives = 39/73 (53%)
 Frame = -1

Query: 377 LLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 198
           LL +L  +GV ++ Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+R
Sbjct: 78  LLNKLHAMGVSND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVR 136

Query: 197 VRKQVVNIPSFIV 159
           V  +++  P+F+V
Sbjct: 137 VGPEMIKDPAFLV 149


>AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 285 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 187
           A   DA V  W  +V P C+N + A  +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158


>AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 285 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 187
           A   DA V  W  +V P C+N + A  +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158


>AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precursor
           protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 273 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 187
           DA V  W  +V P C+N + A  +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158


>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
            protein.
          Length = 1958

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 186  LLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSN 356
            LL   + PLP  NSG  +  +QA   H  +      V N + K +++  L  +Q+ +
Sbjct: 1095 LLMRLSQPLPASNSGRANLFQQAVPHHKDVHPKASSVYNPRIKEVLQVLLQALQFKH 1151


>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = -1

Query: 395 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS--IHHARI 222
           +  GN +   +V +  L  K+  +D  L  K+E  L+  ++T+V   G   +  IH    
Sbjct: 114 ILTGNNVADVVVILKTLPTKEA-VD-ALAKKVEADLKASMKTEVLTKGDQHTVQIHERGF 171

Query: 221 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSL 123
            I   H +VR  +  +P  + +L+   H+D  L
Sbjct: 172 DIANVHAKVRILIATLPQNLRKLEPEIHLDHKL 204


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = -1

Query: 395 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS--IHHARI 222
           +  GN +   +V +  L  K+  +D  L  K+E  L+  ++T+V   G   +  IH    
Sbjct: 114 ILTGNNVADVVVILKTLPTKEA-VD-ALAKKVEADLKASMKTEVLTKGDQHTVQIHERGF 171

Query: 221 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSL 123
            I   H +VR  +  +P  + +L+   H+D  L
Sbjct: 172 DIANVHAKVRILIATLPQNLRKLEPEIHLDHKL 204


>AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-PA
           protein.
          Length = 1320

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -1

Query: 266 VFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS-PFGGGRPGR 90
           +F+  + ++I H +    Q+ +    +  N   FI+ L  G   D S K     GG+  R
Sbjct: 501 LFQGSIGENIRHGKPEATQKEVEDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQR 560

Query: 89  V 87
           +
Sbjct: 561 I 561


>AY058781-1|AAL14010.1|  585|Drosophila melanogaster SD07191p
           protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +3

Query: 261 EHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSNTNQ 365
           E+ RLQ  LQE    LNLQT+   EF    +Q S T++
Sbjct: 423 ENERLQRELQEARAELNLQTRRASEFEQQLLQLSETSR 460


>AE014296-3712|AAF51856.1|  585|Drosophila melanogaster CG11238-PA
           protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +3

Query: 261 EHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSNTNQ 365
           E+ RLQ  LQE    LNLQT+   EF    +Q S T++
Sbjct: 423 ENERLQRELQEARAELNLQTRRASEFEQQLLQLSETSR 460


>AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p
           protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 490 DVVKXRPVNCNTTHYRANWV 431
           D +K RP NC T H  A WV
Sbjct: 2   DQLKLRPCNCLTAHPLAEWV 21


>AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-PA
           protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 490 DVVKXRPVNCNTTHYRANWV 431
           D +K RP NC T H  A WV
Sbjct: 2   DQLKLRPCNCLTAHPLAEWV 21


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,587,193
Number of Sequences: 53049
Number of extensions: 515959
Number of successful extensions: 1431
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)