Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308C09f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 227 6e-61
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 226 1e-60
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 178 5e-46
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 145 3e-36
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 134 8e-33
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 54 1e-08
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 46 3e-06
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 31 0.079
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 0.73
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 27 2.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.0
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.0
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 5.2
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 5.2
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 227 bits (556), Expect = 6e-61
Identities = 114/173 (65%), Positives = 126/173 (72%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 306 DLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDE 365
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L GD SE+ QD GIETAGGVMT LIKRN
Sbjct: 366 AVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEI 425
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+
Sbjct: 426 FSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDV 478
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 226 bits (553), Expect = 1e-60
Identities = 113/173 (65%), Positives = 127/173 (73%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 306 DLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDE 365
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
IL GD SE+ QD GIETAGGVMT LIKRN
Sbjct: 366 AVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEV 425
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+
Sbjct: 426 FSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDV 478
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 178 bits (433), Expect = 5e-46
Identities = 92/173 (53%), Positives = 115/173 (66%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 338 DLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDE 396
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L G++ + + GIET GGVMT LI RN
Sbjct: 397 AVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQI 454
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++
Sbjct: 455 FSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEV 507
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 145 bits (352), Expect = 3e-36
Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Frame = +1
Query: 7 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 186
F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 312 FKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAV 371
Query: 187 XXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXX 363
+L + S++ QD G+ G V + RN
Sbjct: 372 AYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTF 431
Query: 364 XXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++
Sbjct: 432 TTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFEL 483
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 134 bits (324), Expect = 8e-33
Identities = 69/172 (40%), Positives = 101/172 (58%)
Frame = +1
Query: 4 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEX 183
L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 355 LVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEA 413
Query: 184 XXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXX 363
+L G V+D GIET GGV T LI RN
Sbjct: 414 VAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVF 469
Query: 364 XXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+D Q V I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+
Sbjct: 470 STAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDV 521
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 54.4 bits (125), Expect = 1e-08
Identities = 21/60 (35%), Positives = 42/60 (70%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 342 DMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 46.0 bits (104), Expect = 3e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +1
Query: 25 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 31.5 bits (68), Expect = 0.079
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 28 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 165
V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 0.73
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -3
Query: 261 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRFV--ELLSIKEILQELLHLGDTSGA 94
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 93 THQYNIVDLSLIHLGIT 43
+ I D SL+ L T
Sbjct: 992 NLETTIEDTSLVKLETT 1008
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 2.2
Identities = 24/95 (25%), Positives = 35/95 (36%)
Frame = -3
Query: 474 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSS 295
WD G+ ++ I GHS +L L+ +G V+ S+ H
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLE--NGSVLTANYNSASISRSKAKDEKPHVWHHEGK 118
Query: 294 SLNTEGKGCYIKQQQILHLLRLVTVQDSSLDSCTI 190
SL+ E + Q H LV D LD +I
Sbjct: 119 SLHPERQTSSHPHQVTAH-KHLVCSVDLGLDRFSI 152
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 76 RGFEPYPSWHHGETSPLAP 20
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 329 TLPSPLNRLRHSPPTLITNPEYSSKYLR 412
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -3
Query: 399 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 220
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 219 QDSSLDSCTISYGLVR 172
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 2 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 91
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 80 LYWWVAPLVSPRCRSSCKISLMERSSTNLL 169
LYW V C+S IS + SST+LL
Sbjct: 540 LYWDVQAAKDVDCKSVVDISQLRVSSTSLL 569
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.137 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,186,707
Number of Sequences: 5004
Number of extensions: 42319
Number of successful extensions: 120
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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