Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308C09f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 225 1e-59
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 5e-58
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 213 1e-55
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 183 7e-47
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 4e-37
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 112 1e-25
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 69 2e-12
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 30 1.0
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 1.3
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022) 28 5.4
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 5.4
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 27 9.4
SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3) 27 9.4
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 27 9.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 225 bits (551), Expect = 1e-59
Identities = 113/175 (64%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 174
DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINP
Sbjct: 308 DLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINP 367
Query: 175 DEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXX 354
DE ILHGDK + V+D GIETAGGVM+ LIKRN
Sbjct: 368 DEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKRNSTIPTKQT 427
Query: 355 XXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
YSDNQPGVLIQVFEGER+MT NNLLGKFELTGIPPAPRGVPQIEVTFDI
Sbjct: 428 QTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDI 482
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 220 bits (538), Expect = 5e-58
Identities = 107/173 (61%), Positives = 127/173 (73%), Gaps = 1/173 (0%)
Frame = +1
Query: 4 LFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE
Sbjct: 402 LFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDE 461
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
ILHGDKSE QD G+ETAGGVMT IKRN
Sbjct: 462 AVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKRNTTIPTKQTQT 521
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
YSDNQ VLIQV+EGER++TKDNNLLGKFEL+GIPPAPRGVPQI+VTFD+
Sbjct: 522 FTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDV 574
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 213 bits (519), Expect = 1e-55
Identities = 103/173 (59%), Positives = 123/173 (71%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLF S ++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE
Sbjct: 309 DLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDE 368
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
IL GDKS+EV+D GIETAG VMT LI+RN
Sbjct: 369 AVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIERNARIPTKATQT 428
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
YSDNQP V I+VFEGER +TK NNLLGKF+L+GIPPAPRGVPQIEVTFDI
Sbjct: 429 FTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDI 481
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 183 bits (446), Expect = 7e-47
Identities = 94/172 (54%), Positives = 115/172 (66%)
Frame = +1
Query: 4 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEX 183
LF+ST++PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE
Sbjct: 1006 LFKSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEA 1065
Query: 184 XXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXX 363
+L G+ E+ + GIET GGVMT LI RN
Sbjct: 1066 VAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVF 1123
Query: 364 XXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+DNQ V IQVFEGER MTKDN+ LGKF+L GIPPAPRGVPQIEVTF+I
Sbjct: 1124 STAADNQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEI 1175
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 151 bits (365), Expect = 4e-37
Identities = 81/173 (46%), Positives = 105/173 (60%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 119 DLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDE 177
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L GD V+D GIET GGV T LI RN
Sbjct: 178 AVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQV 233
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+D Q V I+VF+GER M DN LLG+F+L GIPPAPRGVPQ+EVTFDI
Sbjct: 234 FSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDI 286
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 112 bits (270), Expect = 1e-25
Identities = 64/154 (41%), Positives = 87/154 (56%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 64 DLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDE 122
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L GD V+D GIET GGV T LI RN
Sbjct: 123 AVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQV 178
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 462
+D Q V I+VF+GER M DN LLG+F+L
Sbjct: 179 FSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 69.3 bits (162), Expect = 2e-12
Identities = 25/59 (42%), Positives = 47/59 (79%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 177
DLF+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 341 DLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/63 (36%), Positives = 40/63 (63%)
Frame = +1
Query: 55 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 234
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 235 EEV 243
++
Sbjct: 95 ADM 97
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLF PV ++L+ A M I +VLVGG R+PKVQ L EL K+IN DE
Sbjct: 292 DLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +1
Query: 67 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 285 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEIL 130
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -3
Query: 339 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 205
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 288 NTEGKGCYIKQQQILHLL--RLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLH 115
+ EG G ++Q ++ L ++ VQ +S D C +YG+V + L S +E L+ LH
Sbjct: 463 HVEGAGFRERKQVLVTSLLSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLH 521
Query: 114 LGDTSGATHQ 85
L T T Q
Sbjct: 522 LLQTMWETMQ 531
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 482 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 396
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022)
Length = 284
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 465 GQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS 292
GQL T VI+G T + DEY ++ + C G+ S D+ HDT S
Sbjct: 224 GQLSTTINPVIYGVMNKTFR--DEYKRMLCSLSCWCGCGRRGEASFESDDSQHDTRLS 279
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 332 LPSPLNRLRHSPPTLITNP 388
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1213
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 363 ECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCY 265
+C+ + S DG CGH T+ + G C+
Sbjct: 728 DCVYMSSSDGKWRFKNCGHTTAGYICKRGLMCH 760
>SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3)
Length = 308
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 75 RYCTGGWLHSYPQGAEAPARFL 140
RYC G LH PQ + PA L
Sbjct: 204 RYCIKGPLHRLPQAVQEPATIL 225
>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 517
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 176 SGLIDLLSSFPLKKSCRSFC 117
SG IDLLSSFP+ + R C
Sbjct: 162 SGSIDLLSSFPVLVTLRPLC 181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.137 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,229,066
Number of Sequences: 59808
Number of extensions: 363656
Number of successful extensions: 1009
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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