Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308C09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 254 4e-68
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 254 4e-68
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 222 1e-58
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 222 1e-58
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 217 5e-57
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 187 4e-48
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 187 4e-48
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 173 5e-44
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 149 1e-36
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 124 4e-29
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 111 2e-25
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 91 6e-19
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 91 6e-19
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 40 8e-04
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 31 0.50
Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical pr... 29 2.7
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 28 4.7
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC024819-2|AAF59588.1| 71|Caenorhabditis elegans Hypothetical ... 28 4.7
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 254 bits (621), Expect = 4e-68
Identities = 127/173 (73%), Positives = 133/173 (76%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFRSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 309 DLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDE 368
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
IL GDKSE VQD GIETAGGVMT LIKRN
Sbjct: 369 AVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQT 428
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDI
Sbjct: 429 FTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDI 481
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 254 bits (621), Expect = 4e-68
Identities = 127/173 (73%), Positives = 133/173 (76%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFRSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 309 DLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDE 368
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
IL GDKSE VQD GIETAGGVMT LIKRN
Sbjct: 369 ALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQT 428
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDI
Sbjct: 429 FTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDI 481
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 222 bits (542), Expect = 1e-58
Identities = 108/173 (62%), Positives = 126/173 (72%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR T+EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 309 DLFRKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDE 368
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L G K E ++D GIETAGGVMT LI RN
Sbjct: 369 AVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKT 428
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEVTFDI
Sbjct: 429 FTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDI 481
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 222 bits (542), Expect = 1e-58
Identities = 108/173 (62%), Positives = 126/173 (72%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR T+EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 309 DLFRKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDE 368
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L G K E ++D GIETAGGVMT LI RN
Sbjct: 369 AVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKT 428
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEVTFDI
Sbjct: 429 FTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDI 481
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 217 bits (529), Expect = 5e-57
Identities = 105/173 (60%), Positives = 124/173 (71%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR T+EPVEK+LRDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE
Sbjct: 309 DLFRKTLEPVEKALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDE 368
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L G K + ++D GIETAGGVMT LI RN
Sbjct: 369 AVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGGVMTNLIDRNTRIPAKASKT 428
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
Y+DNQPGV IQV+EGERAMT+DN+ LG FELTGIPPAPRGVPQ++VTFDI
Sbjct: 429 FTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDI 481
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 187 bits (456), Expect = 4e-48
Identities = 93/173 (53%), Positives = 117/173 (67%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR+T++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 338 DLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDE 397
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
++ G+ E+ + GIET GGVMT LI RN
Sbjct: 398 AVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQV 455
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+DNQP V IQVFEGER MTKDN+ LGKF+LTG+PPAPRGVPQIEVTF+I
Sbjct: 456 FSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEI 508
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 187 bits (456), Expect = 4e-48
Identities = 93/173 (53%), Positives = 117/173 (67%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR+T++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 338 DLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDE 397
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
++ G+ E+ + GIET GGVMT LI RN
Sbjct: 398 AVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQV 455
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+DNQP V IQVFEGER MTKDN+ LGKF+LTG+PPAPRGVPQIEVTF+I
Sbjct: 456 FSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEI 508
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 173 bits (422), Expect = 5e-44
Identities = 88/173 (50%), Positives = 110/173 (63%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DLFR+T++PV+K L DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE
Sbjct: 335 DLFRATLKPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDE 394
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
++ G E D GIET GGVMT LI RN
Sbjct: 395 AVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQV 452
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+D+Q V I ++EGER M DN+ LG F++TGIPPAPRGVPQIEVTF+I
Sbjct: 453 FSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEI 505
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 149 bits (361), Expect = 1e-36
Identities = 80/173 (46%), Positives = 102/173 (58%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DL + T+EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 336 DLIKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDE 394
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L GD V D GIET GG+MT LI RN
Sbjct: 395 AVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQV 450
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
+D Q V I+VF+GER M N LLG+F L GIPPAPRGVPQ+EVTFDI
Sbjct: 451 FSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDI 503
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 124 bits (299), Expect = 4e-29
Identities = 65/138 (47%), Positives = 81/138 (58%)
Frame = +1
Query: 106 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 285
IPKVQ+L++D+FNGKE ++ INPDE ++ G E D G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58
Query: 286 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 465
IET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++T
Sbjct: 59 IETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVT 118
Query: 466 GIPPAPRGVPQIEVTFDI 519
GIPPAPRGVPQIEVTF+I
Sbjct: 119 GIPPAPRGVPQIEVTFEI 136
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 111 bits (268), Expect = 2e-25
Identities = 64/157 (40%), Positives = 84/157 (53%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DL + T+EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 336 DLIKRTIEPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDE 394
Query: 181 XXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXX 360
+L GD V D GIET GG+MT LI RN
Sbjct: 395 AVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQV 450
Query: 361 XXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 471
+D Q V I+VF+GER M N LLG+F L GI
Sbjct: 451 FSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 90.6 bits (215), Expect = 6e-19
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPD 177
+L +T+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PD
Sbjct: 305 NLLMATVIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPD 364
Query: 178 EXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXX 357
E +L G +EEVQD G++ M+ LIK+
Sbjct: 365 EAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRK 422
Query: 358 XXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
D Q + + V+EGER + N LG+ L I P RG +++T ++
Sbjct: 423 TFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEV 475
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 90.6 bits (215), Expect = 6e-19
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPD 177
+L +T+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PD
Sbjct: 305 NLLMATVIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPD 364
Query: 178 EXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXX 357
E +L G +EEVQD G++ M+ LIK+
Sbjct: 365 EAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRK 422
Query: 358 XXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI 519
D Q + + V+EGER + N LG+ L I P RG +++T ++
Sbjct: 423 TFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEV 475
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 177
DL ++ P+ +L DA +D A + +IVLVGGST++P V+K++ FF K N ++P+
Sbjct: 340 DLLKAIELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 22 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
EP+E++LR A++ I VL+G TR+PKVQ+++Q KE+ K +N DE
Sbjct: 350 EPIEQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DL P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 330 DLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 1 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
DL P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 346 DLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +1
Query: 67 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 180
+I +I +VGGS+RIP ++++++D F GKE ++N DE
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.50
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -3
Query: 441 VVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS-LNTEGKGCY 265
+VI GH Y G V+R GG +SLFS L+ GH +SS L E G
Sbjct: 208 LVIRGHQLFKEMYPQ---GCVLRFGGRLISLFS-----ALNYEGHKNNSSVLKLEFVGQR 259
Query: 264 IKQQQILHLLR 232
+K +Q+L+ R
Sbjct: 260 VKVKQVLYRCR 270
>Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical
protein H12D21.10 protein.
Length = 523
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -3
Query: 255 QQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQYN 79
Q ILH L + + L+ I L R F ++L+IKEIL+ L HL + S YN
Sbjct: 327 QFILHRLG-IRQPKADLEKARIVI-LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 100 WSHPPVQYRGFEPYPSWHHGETSPLAPW 17
WS P R P +W G T+P + W
Sbjct: 463 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 490
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 100 WSHPPVQYRGFEPYPSWHHGETSPLAPW 17
WS P R P +W G T+P + W
Sbjct: 461 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 488
>AC024819-2|AAF59588.1| 71|Caenorhabditis elegans Hypothetical
protein Y55B1AL.2 protein.
Length = 71
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 180 LVRVNRFVELLSIKEILQELLHLGDTSGATHQYNIVDLSLIHLGITERLLHWLHGRPEQI 1
+V V + V + S Q L+HL D+ ++ + +L HL I + ++ L + EQI
Sbjct: 1 MVNVKKGVLVTSDPAFRQLLIHLDDSRQLGSKFIVRELDDTHLFIEKEIVPMLENKVEQI 60
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 452 LPSKLLSLVIARSPSNTW 399
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 452 LPSKLLSLVIARSPSNTW 399
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 452 LPSKLLSLVIARSPSNTW 399
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.137 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,477
Number of Sequences: 27780
Number of extensions: 248391
Number of successful extensions: 605
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -