Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308C08f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60... 181 3e-46
At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) simi... 181 3e-46
At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Simi... 180 5e-46
At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Simi... 180 5e-46
At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.47
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera... 30 1.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 30 1.1
At5g25320.1 68418.m03004 ACT domain-containing protein contains ... 29 1.4
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 1.4
At4g24350.1 68417.m03494 phosphorylase family protein contains P... 29 1.9
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 29 1.9
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 2.5
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 2.5
At3g32030.1 68416.m04070 terpene synthase/cyclase family protein... 29 2.5
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 29 2.5
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 29 2.5
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 2.5
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 28 3.3
At2g43030.1 68415.m05340 ribosomal protein L3 family protein con... 28 3.3
At2g13150.1 68415.m01450 expressed protein contains a bZIP trans... 28 3.3
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 28 4.4
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 27 5.8
At4g31490.1 68417.m04473 coatomer beta subunit, putative / beta-... 27 5.8
At3g45880.1 68416.m04965 hypothetical protein 27 5.8
At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138... 27 5.8
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 27 7.7
At5g41240.1 68418.m05011 glutathione S-transferase, putative sim... 27 7.7
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.7
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 27 7.7
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 7.7
At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At1g76990.3 68414.m08966 ACT domain containing protein low simil... 27 7.7
At1g76990.2 68414.m08965 ACT domain containing protein low simil... 27 7.7
At1g76990.1 68414.m08964 ACT domain containing protein low simil... 27 7.7
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 27 7.7
>At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60S
ribosomal protein L21 GI:3885884 from [Oryza sativa]
Length = 164
Score = 181 bits (440), Expect = 3e-46
Identities = 84/153 (54%), Positives = 111/153 (72%)
Frame = +2
Query: 11 GYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVY 190
G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++
Sbjct: 6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIW 65
Query: 191 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKT 370
NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L +AKA G+T
Sbjct: 66 NVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGET 125
Query: 371 VNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 469
++ KRQP PK +V G + PIPY+ V
Sbjct: 126 ISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) similar
to 60S ribosomal protein L21 GB:Q43291 GI:2851508 from
[Arabidopsis thaliana]
Length = 164
Score = 181 bits (440), Expect = 3e-46
Identities = 84/153 (54%), Positives = 111/153 (72%)
Frame = +2
Query: 11 GYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVY 190
G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++
Sbjct: 6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIW 65
Query: 191 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKT 370
NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L +AKA G+T
Sbjct: 66 NVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGET 125
Query: 371 VNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 469
++ KRQP PK +V G + PIPY+ V
Sbjct: 126 ISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Similar
to ribosomal protein L21 (gb|L38826). ESTs
gb|AA395597,gb|ATTS5197 come from this gene
Length = 164
Score = 180 bits (438), Expect = 5e-46
Identities = 84/153 (54%), Positives = 110/153 (71%)
Frame = +2
Query: 11 GYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVY 190
G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++
Sbjct: 6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIW 65
Query: 191 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKT 370
NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L AKA G+T
Sbjct: 66 NVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGET 125
Query: 371 VNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 469
++ KRQP PK +V G + PIPY+ V
Sbjct: 126 ISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Similar
to L21 family of ribosomal protein; amino acid sequence
is identical to F21M12.8
Length = 164
Score = 180 bits (438), Expect = 5e-46
Identities = 84/153 (54%), Positives = 110/153 (71%)
Frame = +2
Query: 11 GYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVY 190
G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++
Sbjct: 6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIW 65
Query: 191 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKT 370
NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L AKA G+T
Sbjct: 66 NVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGET 125
Query: 371 VNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 469
++ KRQP PK +V G + PIPY+ V
Sbjct: 126 ISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 450
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 262 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 83
+ L++ L N S V + + FVW LLN SDV+ V +H
Sbjct: 335 EVLKHQAIGGFLTHNGWNSTVESVFEGVPMICMPFVWDQLLNARFVSDVWMVG--LHLEG 392
Query: 82 RGERN 68
R ERN
Sbjct: 393 RIERN 397
>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = -2
Query: 322 DSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTL 143
+ + E L+ G + D L++ L N S V A + + F W +
Sbjct: 320 EEIMEKLNEKGKIVKWAPQQDVLKHRAIGGFLTHNGWSSTVESVCEAVPMICLPFRWDQM 379
Query: 142 LNCTIASDVYNVSNFVHFHVRGERN 68
LN SDV+ V ++ R ERN
Sbjct: 380 LNARFVSDVWMVG--INLEDRVERN 402
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +1
Query: 106 RHCRHQRQWCS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+H H++ C SKGYA QS D + C CDC + SR + HQ C
Sbjct: 141 KHSNHKQWICERCSKGYAVQS----DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
Query: 274 *ACQALQVQTRLP*ESQRE*EATE 345
++ RL + Q AT+
Sbjct: 197 TVRRSQPSNHRLHEQQQHTTNATQ 220
>At5g25320.1 68418.m03004 ACT domain-containing protein contains
Pfam ACT domain PF01842
Length = 500
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 133 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ----QACSRKDYTEAHQ 264
C +GY+ ++ KDR R+ D C+ D Q A R D +A Q
Sbjct: 291 CEERGYSIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQ 338
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRV--QRDCSCSRCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK +++ RD RCDC SRKD H+ C
Sbjct: 156 EKKWKCEKCSKFYAVQS-DWKAHTKICGTRDY---RCDCGTLFSRKDTFITHRAFC 207
>At4g24350.1 68417.m03494 phosphorylase family protein contains Pfam
PF01048: Phosphorylase family
Length = 336
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 121 DVYNVSNFVHFHVRGERNSSM 59
DV+NV VHF + G N+SM
Sbjct: 114 DVFNVKGIVHFGIAGNMNNSM 134
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA S WK S++ C RCDC SRKD H+ C
Sbjct: 142 EKKWKCDKCSKKYAVMS-DWKAHSKI---CGTKEYRCDCGTLFSRKDSFITHRAFC 193
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK S++ C +CDC SR+D H+ C
Sbjct: 134 EKKWKCEKCSKKYAVQS-DWKAHSKI---CGTKEYKCDCGTLFSRRDSFITHRAFC 185
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK S++ C +CDC SR+D H+ C
Sbjct: 136 EKKWKCDKCSKKYAVQS-DWKAHSKI---CGTKEYKCDCGTLFSRRDSFITHRAFC 187
>At3g32030.1 68416.m04070 terpene synthase/cyclase family protein
contains Pfam profile: PF01397 terpene synthase family
Length = 604
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 325 FDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVV 188
FDS ++L AL VL +N DI S +V+ M+ H V
Sbjct: 482 FDSKPKILQALSVLYRINNDIVTYEREMSKGEVVNGVNSYMNQHGV 527
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 156 EKKWKCEKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTIFSRRDSYITHRAFC 207
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 154 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTLFSRRDSFITHRAFC 205
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 155 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTIFSRRDSYITHRAFC 206
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 257 RINIRVEHVKHSKCRQDFLKRVKENERL 340
+ ++++EHV S RQ+F + +K NE++
Sbjct: 920 KFHVKIEHVDRSVRRQEFGRIIKTNEKV 947
>At2g43030.1 68415.m05340 ribosomal protein L3 family protein
contains Pfam profile PF00297: ribosomal protein L3
Length = 271
Score = 28.3 bits (60), Expect = 3.3
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 KVYKVGDIVDIRGNGAVQKGMPH--KVYHGKTGRV-YNVTAH-ALGVIVNKRVRGRIIP- 253
+++K GD+VD+ G + KG K +H K G++ + +H ALG I GR+
Sbjct: 155 EIFKEGDLVDVAGT-TIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKG 213
Query: 254 KRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKR 385
K++ R+ + + +K KE ++ + GK NL R
Sbjct: 214 KKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLR 257
>At2g13150.1 68415.m01450 expressed protein contains a bZIP
transcription factor basic domain signature (PDOC00036)
Length = 262
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 276 SMSSTPSADKTSLRESKRMRGY*RKPRLPARPST*RDSQLPLKLPTSSVELRNPS 440
S +STPS ++ + S P L PS+ R + +PL P++SVE R+ S
Sbjct: 4 SDNSTPSRPRSITQPSLAFSSL---PPLSPSPSSSRRNSIPLMNPSASVESRDSS 55
>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455, [Capsicum annuum] GI:6899972
Length = 369
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 95 YKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVN 226
Y+ G V + +G + G PHKV R+Y++ + ALG + N
Sbjct: 125 YREGQSVGVIADGIDKNGKPHKV------RLYSIASSALGDLGN 162
>At5g41220.1 68418.m05009 glutathione S-transferase, putative
similar to emb|CAA10662
Length = 590
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 55 HTWNYSALHVHESVQSWRHCRHQRQWCS 138
+T NY + E +WR RH ++WCS
Sbjct: 370 YTNNYKSNFTLE--HAWRELRHSKKWCS 395
>At4g31490.1 68417.m04473 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 948
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 263 NIRVEHVKHSKCRQDFLKRVKENE-RLLKEAKAAGKTVN 376
N+ ++ + CRQ F+K + E + R ++E KA +T +
Sbjct: 628 NVEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTH 666
>At3g45880.1 68416.m04965 hypothetical protein
Length = 431
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -2
Query: 391 WLSLQVDGLAGSLGFLQ*PLILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTL 227
W +Q D FLQ L SL VLS D ++D + ++ PSA L
Sbjct: 299 WYDMQFDIKYAYFNFLQSLLYKSSSLNPVLSWREDEDSESSDAEGSKFTPSATNL 353
>At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 672
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 146 GMPHKVYHGKTGRVYNVTAHALGVIVNK 229
G P K Y+G GR+ AHAL NK
Sbjct: 182 GKPKKTYNGTYGRLLAYAAHALAEGQNK 209
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C +K YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 139 EKKWTCEKCAKRYAVQS-DWKAHSKT---CGTREYRCDCGTIFSRRDSFITHRAFC 190
>At5g41240.1 68418.m05011 glutathione S-transferase, putative
similar to glutathione S-transferase, GST 10b
GB:CAA10662 [Arabidopsis thaliana] 37349.
Length = 591
Score = 27.1 bits (57), Expect = 7.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 100 SWRHCRHQRQWCSS 141
+WR RH ++WCS+
Sbjct: 385 AWRELRHNKKWCST 398
>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -2
Query: 262 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 83
+ L++ L N S V + + F W LLN SDV+ V +H
Sbjct: 336 EVLKHRAIGGFLTHNGWNSTVESVCEGVPMICLPFRWDQLLNARFVSDVWMVG--IHLEG 393
Query: 82 RGERN 68
R ER+
Sbjct: 394 RIERD 398
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C SK YA QS WK ++ C +CDC SRKD H+ C
Sbjct: 156 EKKWKCEKCSKKYAVQS-DWKAHAKT---CGTREYKCDCGTLFSRKDSFITHRAFC 207
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = +1
Query: 205 CSRCD----CQQACSRKDYTEAHQYPC 273
CSRC C C R D++ HQ C
Sbjct: 72 CSRCKSVRYCSAECQRSDWSSGHQRNC 98
>At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 80 TYMKVYKVGDIVDIRGNGAVQK---GMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRII 250
TY ++ ++G+ V G Q+ +P K Y K G +++ ++ + ++ +I
Sbjct: 151 TYEELVELGEAVGTESRGLSQELIETLPTKKY--KFGSIFSRKRAGERCVICQ-LKYKIG 207
Query: 251 PKRINIRVEHVKHSKCRQDFL 313
+++N+ +HV HS+C +L
Sbjct: 208 ERQMNLPCKHVYHSECISKWL 228
>At1g76990.3 68414.m08966 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 133 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 225
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g76990.2 68414.m08965 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 133 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 225
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g76990.1 68414.m08964 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 133 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 225
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 121 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 273
+++W C +K YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 143 EKKWKCEKCAKRYAVQS-DWKAHSKT---CGTREYRCDCGTIFSRRDSFITHRAFC 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,237,954
Number of Sequences: 28952
Number of extensions: 227987
Number of successful extensions: 817
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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