BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308C07f (521 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 26 0.20 AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 2.5 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 3.3 AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 3.3 DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.7 >AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. Length = 366 Score = 26.2 bits (55), Expect = 0.20 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -3 Query: 306 FLVVKLLFP*IPSDTDKKSHTIHNDTQYCYDFFILLYLHMNGT 178 F ++ + P +PSD K T+ T+Y F +L+ +M T Sbjct: 273 FAALRKIIPTLPSDKLSKIQTLKLATRYIDFLFQVLHCNMENT 315 >AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1 protein. Length = 500 Score = 22.6 bits (46), Expect = 2.5 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +1 Query: 49 RTTICGRTVGLPSNKTR 99 R ICG+T +P+ TR Sbjct: 93 RCNICGKTFAVPARLTR 109 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 22.2 bits (45), Expect = 3.3 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +2 Query: 185 FICKYNNIKKS*QYCVSLCIVCDF 256 F+C+Y +C +LC CDF Sbjct: 735 FLCRYE------AHCFALCHCCDF 752 >AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex determiner protein. Length = 418 Score = 22.2 bits (45), Expect = 3.3 Identities = 7/16 (43%), Positives = 13/16 (81%) Frame = -2 Query: 406 IIR*DLFNKYSHSHQR 359 I+ +L+ KYSH+H++ Sbjct: 61 ILEYELYIKYSHTHEK 76 >DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. Length = 495 Score = 21.0 bits (42), Expect = 7.7 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +1 Query: 43 KLRTTICGRTVGLPSNKTRC*YQIKRTFNYK 135 K+ TT G ++ + C Y+IK+ YK Sbjct: 453 KVETTHSGTSLFRINLGIECGYEIKKLLRYK 483 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 134,539 Number of Sequences: 438 Number of extensions: 2980 Number of successful extensions: 6 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14600229 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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