Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308C04f
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   7.2  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    23   7.2  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    22   9.5  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = -3

Query: 203 HALGTLYNRLINVMKHEIVVNLIFYRVFLHSESYFVRSVFLVFS*ALKVYK 51
           + L T     ++++   I++N  F     H    ++RSVFL +  A+ + K
Sbjct: 298 YLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPMWIRSVFLHYLPAMLLMK 348


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 351 RTFKLYDFVYFHTKNLLXFYDKSEN 425
           +T  + DF YFH +NL  +Y++ ++
Sbjct: 88  KTVLVKDFSYFHDRNL--YYNERDD 110


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 417 FYHKNXIDFLYENK 376
           F+H + +D LYEN+
Sbjct: 101 FFHPDPLDELYENR 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,553
Number of Sequences: 2352
Number of extensions: 6690
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)