BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308C03f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0152 - 1168928-1169377 212 1e-55 11_01_0155 - 1287003-1287452 212 1e-55 03_06_0097 - 31632238-31632525,31633386-31633769 43 1e-04 07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539... 38 0.004 07_03_0227 - 15398371-15398925 30 0.98 11_06_0598 - 25391923-25393197 28 5.2 11_01_0523 - 4109070-4109984,4110532-4110936 28 5.2 04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 28 5.2 01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533... 27 6.9 >12_01_0152 - 1168928-1169377 Length = 149 Score = 212 bits (518), Expect = 1e-55 Identities = 94/141 (66%), Positives = 118/141 (83%) Frame = +1 Query: 4 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 183 P VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKD 68 Query: 184 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 363 +D+R+ V+GGG +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI +YDR+LLVADPR Sbjct: 69 IDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPR 128 Query: 364 RCEPKKFGGPGARARYQKSYR 426 RCEPKKFGG GARAR+QKSYR Sbjct: 129 RCEPKKFGGRGARARFQKSYR 149 >11_01_0155 - 1287003-1287452 Length = 149 Score = 212 bits (518), Expect = 1e-55 Identities = 94/141 (66%), Positives = 118/141 (83%) Frame = +1 Query: 4 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 183 P VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKD 68 Query: 184 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 363 +D+R+ V+GGG +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI +YDR+LLVADPR Sbjct: 69 IDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPR 128 Query: 364 RCEPKKFGGPGARARYQKSYR 426 RCEPKKFGG GARAR+QKSYR Sbjct: 129 RCEPKKFGGRGARARFQKSYR 149 >03_06_0097 - 31632238-31632525,31633386-31633769 Length = 223 Score = 43.2 bits (97), Expect = 1e-04 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 3/142 (2%) Frame = +1 Query: 10 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 180 Q + GR+KTA A + G G + +N R P ++Y + P++ LG E + Sbjct: 96 QRITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEY-CKVPLVTLGFE--N 152 Query: 181 MVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADP 360 D+ V V GGG Q AI +++AL+ + A+K ++ LL D Sbjct: 153 SYDVFVKVHGGGLSGQAQAICLGVARALVK-----ISTANKVTLR------GEGLLTRDT 201 Query: 361 RRCEPKKFGGPGARARYQKSYR 426 R E KK G AR R Q S R Sbjct: 202 RIVERKKAGLKKARKRPQFSKR 223 >07_03_1553 - 27653473-27653490,27653634-27653673,27653852-27653939, 27654150-27654230,27654644-27655084,27655692-27656325 Length = 433 Score = 38.3 bits (85), Expect = 0.004 Identities = 26/79 (32%), Positives = 38/79 (48%) Frame = +1 Query: 28 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 207 G++K + A + + G G VN + D P +L ++ + D+ TVK Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353 Query: 208 GGGHVAQVYAIRQAISKAL 264 GGG QV AIR IS+AL Sbjct: 354 GGGVSGQVGAIRLGISRAL 372 >07_03_0227 - 15398371-15398925 Length = 184 Score = 30.3 bits (65), Expect = 0.98 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -2 Query: 148 VPEVCTAAVWAQPSPMGARLHAAFH--DHACNTQLRWRF 38 +P +C A W P+ A H FH C+ + RW + Sbjct: 23 LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61 >11_06_0598 - 25391923-25393197 Length = 424 Score = 27.9 bits (59), Expect = 5.2 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = -1 Query: 407 LARAPGPPNFLGSQRRGSATSKLLSYCTRMSLISFFEASSTYFW*KAIRAF 255 LA PP L S TS L + T + ++ S+TY AIR F Sbjct: 254 LATLVSPPKLLQSLNISGITSGLPDWITELDQLTKITLSNTYLGEDAIRVF 304 >11_01_0523 - 4109070-4109984,4110532-4110936 Length = 439 Score = 27.9 bits (59), Expect = 5.2 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +1 Query: 208 GGGHVAQVYAIRQAISKALIAFY 276 GGG V +++A++KAL+AFY Sbjct: 48 GGGGFFDVGRLKEALAKALVAFY 70 >04_04_1154 - 31297628-31298020,31298150-31298300,31298389-31298620, 31298700-31298910,31299137-31299255,31299341-31299415, 31299991-31300189,31300258-31300664,31300775-31300839, 31300967-31301011,31301449-31301520,31301597-31301671, 31301912-31301983,31302178-31302249,31302525-31302596, 31302880-31302951,31303056-31303127,31304064-31304135, 31304375-31304561,31304686-31304815 Length = 930 Score = 27.9 bits (59), Expect = 5.2 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +1 Query: 91 NGRPLDLVEPRLLQYKLQEPILLL 162 NG PLD V+P+L ++ +E I ++ Sbjct: 807 NGHPLDFVDPKLSEFNSEEVIRVI 830 >01_05_0500 + 22752190-22752329,22752957-22753032,22753292-22753351, 22754718-22754882,22756299-22756358 Length = 166 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 102 WAPVYTQHSMTTLAIRNCGGGFLTSEYLD 16 W V T H +T +A R+C G F ++LD Sbjct: 18 WNYVVTAHKLTVVA-RSCVGNFTAPDHLD 45 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,960,112 Number of Sequences: 37544 Number of extensions: 329414 Number of successful extensions: 909 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 889 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 909 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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