Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308C02f
         (454 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0226 - 13962764-13964048,13964256-13964750,13965854-13966623     28   3.1  
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893...    27   5.3  

>01_03_0226 - 13962764-13964048,13964256-13964750,13965854-13966623
          Length = 849

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 427 AEMRPCQLYGSIFPVTYNLYSISAY*SIEFAVLVKHHNDVC 305
           A +R C LY SIFP  Y + S+S+     F  ++      C
Sbjct: 403 ANLRACLLYLSIFPEDYEVSSLSS--EENFVTILNDEQQTC 441


>08_01_0906 +
           8933230-8933797,8933894-8934543,8937956-8938615,
           8939751-8939817,8940421-8940724,8942993-8942996,
           8944539-8946449
          Length = 1387

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = -1

Query: 448 ILNXYRSA--EMRPCQLYGSIFPVTYNL 371
           +L+ +RS    ++PC LY SIFPV + +
Sbjct: 833 LLSYFRSCPDSLKPCILYLSIFPVNHTI 860


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,163,179
Number of Sequences: 37544
Number of extensions: 143604
Number of successful extensions: 255
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)