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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308C01f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      42   3e-04
SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      40   0.002
SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)                       29   1.8  
SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)                       29   3.1  
SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)                      28   4.1  
SB_5493| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.1  
SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38)          28   5.4  
SB_17269| Best HMM Match : RRM_1 (HMM E-Value=8.2)                     28   5.4  
SB_13740| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
 Frame = +1

Query: 163 LLLSLYESGAGAQSKEEIREILGGGEAQ-ESTH-TYGLLNQRYAEFDPKF--LTVANKIY 330
           + L L   G+   +  +I  I G  E++ E TH T+   ++     D  +  + + NKI+
Sbjct: 3   MALGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIW 62

Query: 331 VSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDKI 504
             D++++ + F   T   + SE+  ++F +   +A   +N W  +QT+G+IK  +    I
Sbjct: 63  GHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVI 122

Query: 505 DPAT 516
           +  T
Sbjct: 123 NSLT 126


>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 26/131 (19%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
 Frame = +1

Query: 133 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG-GGEAQESTHTYGLLNQRYAEFDPKFL 309
           N+  SP  +++ L++   GA   +  ++ +      +  E  H + L     +  D   +
Sbjct: 29  NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDF-LQALNASNSDGNQI 87

Query: 310 TVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAPKNAA-DIINRWADEQTQGHIKT 483
            +AN+++    +++ + F + +   F +E+  +++    N A D +NRW +++T+  IK 
Sbjct: 88  LMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKN 147

Query: 484 PVSEDKIDPAT 516
            + E   +  T
Sbjct: 148 LIPEGMFNKDT 158


>SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 84

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 320 IKYTFPTSISWPTRSPEQRICSEAKWTTLTSALRRMPL 433
           + ++FP    WP+    QR+ S   W ++ +  RR PL
Sbjct: 40  VYWSFPQLDPWPSVLAFQRVASHHSWPSVLACQRRGPL 77


>SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)
          Length = 354

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 132 ECDSVSSRRDAAAFLVRVWSRCTVQGRDKGNPWGR 236
           E DSV + +D+ A     W+R  +  + K NPW R
Sbjct: 262 EKDSVDTEKDSVATEKNPWTRRKIPWQRKKNPWTR 296


>SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)
          Length = 768

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = -2

Query: 322 YWRQSRISGRILRNADLIIRMCVLTLEPPLPQGFPLSLPWTVHRLQTRTRKAAASRREET 143
           Y    R+S ++   A    R C+L+L   +  G   S  W VH++ T  +K     R++ 
Sbjct: 78  YGLDGRVSDKVF-TATCRARFCLLSLGFTIGFGAMFSKTWRVHQIFTNVKKVKKVVRDKD 136

Query: 142 L 140
           L
Sbjct: 137 L 137


>SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)
          Length = 764

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -3

Query: 483 SLYVSLSLFVRPTVDDIS--GILRSAEVNVVHFASEQIRCSGERVGQLILVGN 331
           SLY  L L + P  +D S   I +S ++ V++   E+I C+GERV   +LV N
Sbjct: 538 SLYDGL-LKLFPECNDASELSIAQSGKLTVLNSMLEEIHCTGERV---VLVSN 586


>SB_5493| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 204 QGRDKGNPWGRGGSRVNTHIRIIKSALRRIRP 299
           QGR K N   +G +R N  +R + +  RR+RP
Sbjct: 7   QGRTKENKGEQGRTRENKELREVHADSRRLRP 38


>SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38)
          Length = 253

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 214 IREILGGGEAQESTHTYGLLNQRYAEFDPKFLTVANKIYVSDQY 345
           I  I GGGE  E  H  G+L  +   FD  F   AN + +S +Y
Sbjct: 81  IANIRGGGEYGEDWHQAGMLGNKQNVFD-DFQAAANYL-ISHEY 122


>SB_17269| Best HMM Match : RRM_1 (HMM E-Value=8.2)
          Length = 157

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
 Frame = -2

Query: 265 RMCVLTLEPPLPQGFPLSLPWTV-----HRLQTRTRKAAASRR-EETLSHS-CRR 122
           R+C+ T  PPLP  F  ++P  +     H   T  R +  SRR + ++ H  CR+
Sbjct: 81  RICLSTFSPPLPPTFSPTIPPIITSSNFHTTATDGRSSCRSRRGKPSVQHPFCRQ 135


>SB_13740| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 430

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = -2

Query: 190 LQTRTRKAAASRREETLSHSCRRLGCRIP*ESSRRSCRWHRRVLSLRIHDRTCRTPAFH 14
           LQTR +    +R     SH+CR +   +    +R   R H R        RTCR   +H
Sbjct: 311 LQTRMQSRMQTRYRHACSHTCRHITDTL---QTRMQIRMHTRY--RHACRRTCRYACWH 364


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.132    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,215,789
Number of Sequences: 59808
Number of extensions: 362164
Number of successful extensions: 1946
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1946
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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