Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B12f
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.34 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.34 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.4  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.8  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 233 YTHLYTLIVKPDNTYEVLIDNEKVES 310
           Y H Y +  KP N  E++  N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 233 YTHLYTLIVKPDNTYEVLIDNEKVES 310
           Y H Y +  KP N  E++  N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 164 HVIFSYKGKNHLIKKDIRCKDDVYTH 241
           H+++ ++G   ++ KD R +   Y H
Sbjct: 213 HLVYPFEGDIRIVNKDRRGELFYYMH 238


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/44 (20%), Positives = 21/44 (47%)
 Frame = -1

Query: 328 VCL*VARFNFLIVNEDFIGVVRFHNQSVQMCVDIIFAADIFFDE 197
           +C+     N  I+N+   G +   +++VQ+ ++       F D+
Sbjct: 32  ICMAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDK 75


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 475 LVHWIW 458
           L+HWIW
Sbjct: 173 LIHWIW 178


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 51  PPQSMSCSCL 22
           P Q+ SCSCL
Sbjct: 320 PSQASSCSCL 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,425
Number of Sequences: 438
Number of extensions: 3120
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)