Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   2.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   2.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   2.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 111 SFHTHHYVSNHSDHFHHIHRG 173
           +F  H  V N   HF H H G
Sbjct: 162 TFRYHFNVHNSGTHFWHSHSG 182


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 87  SPPSGRSHSFHTHHY 131
           S P+GRS +F  HH+
Sbjct: 29  SSPAGRSPAFLPHHF 43


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 87  SPPSGRSHSFHTHHY 131
           S P+GRS +F  HH+
Sbjct: 29  SSPAGRSPAFLPHHF 43


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 87  SPPSGRSHSFHTHHY 131
           S P+GRS +F  HH+
Sbjct: 29  SSPAGRSPAFLPHHF 43


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 219 NCSSVNPGDGKLNIGNLCGYDGNGLN 142
           +C +V  G G+ +  ++CG  G+ +N
Sbjct: 21  SCIAVGVGSGRNSAPSICGEHGHCVN 46


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 124 CVWKE*LRPDGGESEKW 74
           C+W E + PD  E+  W
Sbjct: 511 CLWSEQVGPDSLETRIW 527


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 116 PYTPLRFEPFRPFPSYPQ 169
           PY P     +RP+P Y Q
Sbjct: 251 PYVPFYRYCYRPYPVYNQ 268


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 179 IFNFPSPGFTDEQFPAMQNYPN 244
           I N PSPG      P+ + Y N
Sbjct: 406 IANLPSPGSDQRSTPSPRVYGN 427


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = +3

Query: 93  PSGRSHSFHTHHYVSNHSDHFHHIHRG 173
           P  + ++F       N   HF H H G
Sbjct: 222 PIQQGNTFRYQWIAGNAGTHFWHAHTG 248



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 105 SHSFHTHHYVSN 140
           SH FH H Y  N
Sbjct: 594 SHPFHLHGYAFN 605


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = +3

Query: 93  PSGRSHSFHTHHYVSNHSDHFHHIHRG 173
           P  + ++F       N   HF H H G
Sbjct: 222 PIQQGNTFRYQWIAGNAGTHFWHAHTG 248



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 105 SHSFHTHHYVSN 140
           SH FH H Y  N
Sbjct: 594 SHPFHLHGYAFN 605


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 258 SPEPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMT 377
           SP  +   +S  K+L  + L  TC   TS     +L+QMT
Sbjct: 20  SPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMT 59


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 258 SPEPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMT 377
           SP  +   +S  K+L  + L  TC   TS     +L+QMT
Sbjct: 20  SPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMT 59


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 207 PTNSSPRCRTIRISSARSPEPRLARVSVTKL 299
           PT SSPR   ++   + SP      ++  KL
Sbjct: 224 PTKSSPRSSPVQSDVSLSPVHEPLLITTEKL 254


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 198 PDSPTNSSPRCRTIRISSARSPEPRLARVSVTK 296
           P   TN +PR R       R  EP+  R ++ +
Sbjct: 306 PGEKTNIAPRERPRATDHQRRNEPKRPRPNIDR 338


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 108 HSFHTHHYVSNH 143
           H  H  H+V NH
Sbjct: 328 HHIHAQHHVVNH 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,564
Number of Sequences: 336
Number of extensions: 2565
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)