Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308B11f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 32 0.24
02_05_0551 + 29907768-29907909,29907995-29909280 31 0.56
04_04_1285 - 32382614-32382720,32383032-32383710,32383816-323839... 31 0.74
02_02_0694 + 13013966-13014361 31 0.74
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 30 1.3
08_02_0707 - 20212190-20214592 30 1.3
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462... 30 1.3
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 29 2.3
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753 29 3.0
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691... 29 3.0
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 29 3.0
11_06_0514 - 24477720-24479915 28 4.0
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 28 4.0
03_05_0509 - 25032494-25033156 28 4.0
02_04_0449 + 23010099-23010317,23010873-23010934,23011399-230114... 28 4.0
11_01_0359 - 2731522-2732346 28 5.2
10_06_0107 + 10840633-10841200,10841364-10841488,10856838-10857380 28 5.2
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 5.2
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 5.2
05_01_0214 - 1615519-1616775 28 5.2
12_01_0989 + 10048036-10048125,10048232-10048816,10048930-100493... 27 6.9
11_06_0510 + 24420402-24422582 27 6.9
03_05_0301 + 22928864-22929787 27 6.9
03_02_0761 - 10963045-10963482,10963713-10963889,10964151-109642... 27 6.9
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 27 6.9
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 27 6.9
08_02_0929 + 22694917-22695072,22695399-22695781,22698637-226987... 27 9.1
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 102 RSHSFHTHHYVSNHSDHFHHIHRG 173
R H H H + +H DH HH H G
Sbjct: 537 RHHHDHRHRHGHSHGDHHHHYHGG 560
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3
Query: 99 GRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNS 218
G SH H HHY H H H + + H D +S
Sbjct: 547 GHSHGDHHHHYHGGHHQRRRHHHPPAWDVEGHHHDRQQHS 586
>02_05_0551 + 29907768-29907909,29907995-29909280
Length = 475
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 231 CIAGNCSSVNPGDGKLNIGNLCGYDGNGLNGSKRSGVYGKNDFVLMGVNLKNGLL 67
C A +CS + + G CGY + +GS +GVY + L G N G L
Sbjct: 199 CAAASCSQLALYSNGCS-GGQCGYVVSYGDGSTTTGVYSSDTLTLTGSNALKGFL 252
>04_04_1285 -
32382614-32382720,32383032-32383710,32383816-32383926,
32384007-32384065,32384163-32384271,32384387-32384575,
32384650-32385476,32385501-32385633
Length = 737
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 44 FAYQDSSGNRPFFRFTPIRTKSFFPYTPLRFEPFRPFPSYPQRFPI-FNFPSPGFTDEQF 220
+ +Q N P + + +P TP + + +PS P + I N+PS T Q+
Sbjct: 547 YQHQQIQSNHPSTPYQHQAQSTSYPSTPYQDQIHSSYPSNPTQHQIHLNYPS---TPNQY 603
Query: 221 PAMQNYPN 244
+ YPN
Sbjct: 604 QSHSTYPN 611
>02_02_0694 + 13013966-13014361
Length = 131
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 18 YPTTGESVPSRIKIHQAIDHFSD-SPPSGRSHSFHTHHYVSNHSDHFHHIHRG 173
+P +P+R K+ A+ F D S PS + + HH+ H H HH HRG
Sbjct: 43 HPALALHLPTR-KMLLAVASFDDASSPSSLTTTDRHHHH---HRHHGHHHHRG 91
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 156 HHIHRGSRYLISHRPDSPTNSSPRCRTIRISSARSPEPR----LARVSVTKLLPLIP 314
HH H+ + + D+ N SP RT+ + P R L+ +S+T+L+ L+P
Sbjct: 122 HHQHQPATPTETETEDTAANDSPPPRTLPVRLLNIPVDRLRSTLSTLSLTELIDLVP 178
>08_02_0707 - 20212190-20214592
Length = 800
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 81 SDSPPSGRSHSFHTHHYVSNHSDHFHHIH 167
S S SHS H+H +V H DH +H H
Sbjct: 501 SHSHSHSHSHS-HSHSHVHGHEDHHNHDH 528
>02_05_0410 +
28744716-28744841,28745361-28745965,28746151-28746270,
28746597-28746737,28748626-28749370
Length = 578
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +3
Query: 18 YPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHR 197
+PT ++ + H A + S+S SG S + + S+HS + HH H+ + L+
Sbjct: 370 WPTQRNALAGSTRSHHAKNSSSNSSSSGASSASKNN---SSHSGYHHHHHQ--KPLVKAE 424
Query: 198 PDSPTNSSPRCRTIRI 245
P+ + ++ T+ +
Sbjct: 425 PNDQSAAATTAATVPV 440
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 42 PSRIKIHQAIDHFSDS--PPSGRSHSFHTHHYVSNHSDHFH--HIHRGSRYLISHRPDSP 209
P+ K ++D+FS+S P SG SHS + SD H ++R R H ++
Sbjct: 368 PTPQKPPASLDNFSESDGPISGASHSQISPRTAKEDSDRLHASDLYRSDRKSTGHSYEAT 427
Query: 210 TNSSP 224
SP
Sbjct: 428 YGKSP 432
>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
Length = 375
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 12 QLYPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLIS 191
Q Y + + I IDH SD+ + RSHS H V++ HR S +++
Sbjct: 268 QHYAGSASMAAAAANIVDVIDHSSDAETTTRSHSHSQSHLVADIR------HRQSPFMLD 321
Query: 192 HRPDSPTNSS 221
+ ++SS
Sbjct: 322 FHAGTASSSS 331
>10_08_1052 -
22567937-22568329,22568436-22568669,22568787-22569111,
22569239-22569484,22569576-22569916,22570070-22570150,
22570275-22570394,22570549-22570650,22570900-22571035,
22571210-22571362,22572605-22572906
Length = 810
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 60 HQAIDHFSDSPPSGRS--HSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSP 224
H+ ++ + S ++ H +H HH + + H HH H+ H S T SP
Sbjct: 742 HRQVEEEEEESKSSQATTHYYHHHHEQTTTTTH-HHYHQHEHMSHYHMGPSDTADSP 797
>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 313 GINGSNLVTETRASRGSGERAELIRIVLHRGELFVGESGRWEI 185
G+NG E +RG R E + +V H GEL VG E+
Sbjct: 1382 GVNGGG--DEHPEARGRPRRPEAVVLVAHVGELLVGGDRHQEV 1422
>11_06_0514 - 24477720-24479915
Length = 731
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 211 VGESGRWEIKYREPL-WI*WKWSEWFET*WCVWK 113
V + RW Y++P+ W+ W+W+ +T W W+
Sbjct: 400 VKDRSRW---YKKPMEWLEWRWNFRVKTMWDSWR 430
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 150 HFHHIHRGSRYLISHRPDSPTNSSPRCRTIRISSARSPEPRLARVSVTKLLPLIP 314
H HH H + + P TN +PR R R S + P P R + P +P
Sbjct: 13 HHHHHHHWADARVPLMPKHATNPNPR-RHHRPSPSIPPPPPPQRPPAATVAPSVP 66
>03_05_0509 - 25032494-25033156
Length = 220
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 99 GRSHSFHTHHYVSNHSDHFHHIHR 170
GRS S HH+ +H H H HR
Sbjct: 4 GRSSSSSRHHHGHHHHHHHHRRHR 27
>02_04_0449 +
23010099-23010317,23010873-23010934,23011399-23011450,
23011803-23011917,23012024-23012118,23012852-23012958,
23013042-23013156,23014159-23014203,23014324-23014392
Length = 292
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 129 YVSNHSDHFHHIHRGSRYLISHRPDSPTN 215
Y +N D F H G R +SH P+ P N
Sbjct: 101 YFTNEPDLFDVYHAGYREQMSHWPEQPVN 129
>11_01_0359 - 2731522-2732346
Length = 274
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 75 HFSDSPPSGRSHSFHTHHYVSNHSDHFH 158
H PP H++H HHY H H
Sbjct: 47 HSHSHPPPPPPHAYHHHHYPPPPPPHHH 74
>10_06_0107 + 10840633-10841200,10841364-10841488,10856838-10857380
Length = 411
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 168 RGSRYLISHRPDSPTNSSPRCRTIRISSARSPEPR 272
R +RY + H P S +S RC + I++ R P PR
Sbjct: 118 RRTRYGLCHHPTSRRSSRRRCSSTSITT-RRPPPR 151
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 105 SHSFHTHHYVSNHSDHFHH 161
SHS H +H +H H HH
Sbjct: 51 SHSHHQYHLPDHHHHHHHH 69
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = +3
Query: 69 IDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSP 224
+ H PP H H HH+ +H H H H H P P + P
Sbjct: 20 LSHIFAPPPP---HLRHPHHHPPHHHPHPPHHHPPHHPHPPHHPHPPHHPHP 68
>05_01_0214 - 1615519-1616775
Length = 418
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 99 GRSHSFHTHHYVSNHSDHFHHIHRGSRY-LISHRPDSPTNS 218
G H H+H + SDH HH H + + H D NS
Sbjct: 191 GHGHG-HSHDHDHGGSDHDHHHHEDQEHGHVHHHEDGHGNS 230
>12_01_0989 +
10048036-10048125,10048232-10048816,10048930-10049331,
10049419-10049477,10049711-10049801,10050243-10050329,
10050723-10050791
Length = 460
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 180 IGNLCGYDGNGLNGSKRSGVY-GKNDFVLMGVNLKNGLLPD 61
+G+ CG D +G K+ GV+ G++ VL + + PD
Sbjct: 167 VGSSCGVDADGAAHHKQDGVHAGESREVLQAMEKQEAATPD 207
>11_06_0510 + 24420402-24422582
Length = 726
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -2
Query: 184 KYREPL-WI*WKWSEWFET*WCVWK 113
+Y++P+ W+ W+W+ +T W W+
Sbjct: 406 RYKKPMEWLEWRWNFRVKTMWDSWR 430
>03_05_0301 + 22928864-22929787
Length = 307
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 75 HFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 170
H SPP + S H+H VS H HH HR
Sbjct: 261 HMEPSPP--QPSSGHSHDEVSQQQHHHHH-HR 289
>03_02_0761 -
10963045-10963482,10963713-10963889,10964151-10964261,
10964982-10965227,10965571-10965630,10965729-10966034,
10966626-10966769,10966994-10967392
Length = 626
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 175 EPLWI*WKWSEWFE 134
+P+WI W W EW E
Sbjct: 381 QPVWIAWGWMEWKE 394
>02_03_0074 +
14781763-14784191,14784888-14784978,14785180-14785230,
14785882-14785947,14786509-14786610
Length = 912
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 81 SDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSR 179
S PS H H S H HH H GSR
Sbjct: 147 SSIAPSSPRHPHHHSQPQQPQSHHHHHHHSGSR 179
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 123 HHYVSNHSDHFHHIHRGSRY 182
HH+ +H H HH H SR+
Sbjct: 349 HHHGHHHHHHHHHGHEDSRH 368
>08_02_0929 +
22694917-22695072,22695399-22695781,22698637-22698769,
22698870-22699312,22699786-22699864
Length = 397
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 81 SDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 170
S SP +G H Y + SD FH+ +R
Sbjct: 75 SSSPAAGARRHHPYHAYADSGSDRFHYAYR 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,492,127
Number of Sequences: 37544
Number of extensions: 293888
Number of successful extensions: 1030
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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