Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308B11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25) 33 0.14
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 33 0.19
SB_59540| Best HMM Match : Amelogenin (HMM E-Value=4.7) 32 0.33
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 31 0.44
SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4) 31 0.58
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 31 0.76
SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1) 31 0.76
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 31 0.76
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 30 1.3
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 30 1.3
SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41) 26 1.5
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 29 1.8
SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) 29 1.8
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 29 1.8
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 29 2.3
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 2.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 28 4.1
SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2) 28 4.1
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 28 4.1
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 28 5.4
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 28 5.4
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 28 5.4
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 5.4
SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_29569| Best HMM Match : NAM (HMM E-Value=4.8) 28 5.4
SB_27152| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_5609| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_47560| Best HMM Match : CM_2 (HMM E-Value=0.82) 27 7.1
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 27 7.1
SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) 27 7.1
SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 27 7.1
SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36) 27 7.1
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 27 9.4
SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8) 27 9.4
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 27 9.4
SB_13702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5714| Best HMM Match : CBM_X (HMM E-Value=1.9) 27 9.4
SB_498| Best HMM Match : DUF1067 (HMM E-Value=5.8) 27 9.4
SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85) 27 9.4
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_11613| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_10260| Best HMM Match : B1 (HMM E-Value=7.6) 27 9.4
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 34.3 bits (75), Expect = 0.062
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 93 PSGRSHSFHTHHYVSNHSDHFHHIH 167
P R H H HH+ NH H HH H
Sbjct: 253 PRHRYHHHHHHHHQHNHHQHHHHHH 277
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLISH 194
H+ H HH+ +H H HH H + H
Sbjct: 267 HNHHQHHHHHHHHHHNHHHHHQQHHHHHH 295
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +3
Query: 60 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHI 164
H +H H H HH+ +H H HHI
Sbjct: 264 HHQHNHHQHHHHHHHHHHNHHHHHQQHHHHHHHHI 298
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLIS 191
H H HH+ ++H H H H ++I+
Sbjct: 273 HHHHHHHHHNHHHHHQQHHHHHHHHIIN 300
>SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25)
Length = 418
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 81 SDSPPSGRSHSFHTHHYVSNHSDHFHHIH 167
S S S S S + HHY H H+HH H
Sbjct: 316 SSSSSSTLSSSSYRHHYRYRHRQHYHHFH 344
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 32.7 bits (71), Expect = 0.19
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLISHR 197
+ +H HH+ +H H HH H+ R+ HR
Sbjct: 307 YRYHHHHHHRHHHHHHHHHHQRHRHRHRHR 336
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 57 IHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHR 197
I AI + +PP R H H H + +H H H HR R+ HR
Sbjct: 294 ITTAITITTATPPY-RYHHHHHHRHHHHHHHHHHQRHR-HRHRHRHR 338
>SB_59540| Best HMM Match : Amelogenin (HMM E-Value=4.7)
Length = 181
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 92 PIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 193
P+R KS +P P+ P RP YP R PI +P
Sbjct: 21 PVRPKSGYPVRPVGGYPVRPMGGYPVR-PIGGYP 53
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 92 PIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 193
P+R KS +P P+ P RP YP R P+ +P
Sbjct: 77 PVRPKSGYPVRPMGGYPVRPVGGYPVR-PVGGYP 109
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 9 HQLYPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLI 188
H +P++ S+ I IH H S S H HH+ S+ S HH S +I
Sbjct: 296 HHHHPSSSSSIIIIIIIHH---HHHPSSSSSIIIIIHHHHHPSSSSSIIHH--HPSSIII 350
Query: 189 SHRPDS 206
H P S
Sbjct: 351 HHHPSS 356
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Frame = +3
Query: 3 LIHQLYPTTGESV------PSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSD----- 149
+IH +P++ + PS I IH PS S S HH+ S+ S
Sbjct: 164 IIHHHHPSSSSIIIIIHHHPSSIIIHHPSSSIIHHHPS--SSSIIIHHHPSSSSSIIIII 221
Query: 150 HFHHIHRGSRYLISHRPDS 206
H HH S +I H P S
Sbjct: 222 HHHHHPSSSSSIIIHHPSS 240
>SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4)
Length = 177
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 54 KIHQAIDHFSDSPPS--GRSHSFHTHHYVSNHSDHFHHIHRGSRYLI 188
++ AI+ FS + P+ +H +H + NH H HH + Y I
Sbjct: 54 RVLDAIEFFSQNNPNCLEMTHLYHDQQHQWNHQHHHHHQYHHRHYSI 100
>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 51 IKIHQAIDHFSDSPP-SGRSHSFHTHHYVSNHSDHFHHIH 167
I I I S SPP S S S H +H + +H H HH+H
Sbjct: 88 ITIMTIISSSSSSPPLSSSSQSSHRYHPLCHH--HHHHLH 125
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 30.7 bits (66), Expect = 0.76
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 113 FPYTPLRFEPFRPFPSYPQRFPIFNFPSP 199
F P R PF PFPSY Q P ++ P
Sbjct: 400 FSTPPPRRNPFAPFPSYSQSLPEMDYMPP 428
>SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)
Length = 175
Score = 30.7 bits (66), Expect = 0.76
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 114 FHTHHYVSNHSDHFHHIHRGSRY 182
+H HHY NH H H+H Y
Sbjct: 95 YHFHHYHYNHHHHHFHLHHHLHY 117
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 30.7 bits (66), Expect = 0.76
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRY 182
H ++ HH + +H H+HH H R+
Sbjct: 156 HHYYHHHLLHHHHHHWHHHHHHHRH 180
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 111 SFHTHHYVSNHSDHFHHIH 167
+ H HHY +H H HH H
Sbjct: 152 AIHHHHYYHHHLLHHHHHH 170
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 81 SDSPPSGRSHSFHTHHYVSNHSDHFHH 161
S S S S +H HH+ +H +H+HH
Sbjct: 252 SSSSSSPLSSYYHHHHHRRHHLNHYHH 278
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLIS 191
H+ H HH+ H H HH H + +I+
Sbjct: 231 HNHHHHHHHHYHHYHHHHHHHNNNTIIT 258
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 102 RSHSFHTHHYVSNHSDHFHHIHRGSRYLISH 194
R H H HH+ +H + HH H + H
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHH 239
Score = 28.7 bits (61), Expect = 3.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 105 SHSFHTHHYVSNHSDHFHHIH 167
+H H H++ +H H+HH H
Sbjct: 225 NHHHHHHNHHHHHHHHYHHYH 245
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +3
Query: 42 PSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIH 167
PS + + H H+ H HH+ ++H H HH H
Sbjct: 202 PSIVIYRRHHQHHQHHHHHHHQHNHHHHHH-NHHHHHHHHYH 242
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +3
Query: 60 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIH 167
H H + H + HH+ +H H+HH H
Sbjct: 213 HHQHHHHHHHQHNHHHHHHNHHHHHHHHYHHYHHHH 248
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNS 218
H H H++ +H +H HH H + H N+
Sbjct: 219 HHHHQHNHHHHHHNHHHHHHHHYHHYHHHHHHHNNNT 255
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRCRTI 239
H H H + +H H HH H Y H N++ TI
Sbjct: 217 HHHHHHQHNHHHHHHNHHHHHHHHYHHYHHHHHHHNNNTIITTI 260
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 152 FPSYPQRFPIFNFPSPGFTDEQFPAMQNYPNQ 247
+PSYPQ++P+ P P + +P Q YP Q
Sbjct: 965 YPSYPQQYPMLQ-PYP--QQQPYPQQQPYPQQ 993
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 155 PSYPQRFPIFNFPSPGFTD--EQFPAMQNYPNQ 247
PS P FP + +P + +Q+P +Q YP Q
Sbjct: 949 PSEPPPFPGYGMSNPSYPSYPQQYPMLQPYPQQ 981
>SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41)
Length = 131
Score = 26.2 bits (55), Expect(2) = 1.5
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 117 HTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRCRTIRI 245
H HH+ H HH H Y H P S +SS I I
Sbjct: 51 HYHHHHRQHITVHHHYH---HYHHHHHPPSSLSSSASSANIII 90
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 75 HFSDSPPSGRSHSFHTHH 128
H PPS S+ H HH
Sbjct: 13 HQHHHPPSSPSYHHHRHH 30
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 111 SFHTHHYVSNHSDHFHHIHRGSRYLI 188
+ H HHY +H H HH H +LI
Sbjct: 167 AIHHHHYYHHHLLHHHHHHWHHHHLI 192
Score = 29.1 bits (62), Expect = 2.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIH 167
H ++ HH + +H H+HH H
Sbjct: 171 HHYYHHHLLHHHHHHWHHHH 190
>SB_35197| Best HMM Match : SAP (HMM E-Value=3.2)
Length = 323
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 81 SDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRC 230
S S + S S + S+H H HH+H + L R +PT + +C
Sbjct: 189 SSSSAAAASSSSSSSSSSSHHHYHRHHLHHHHKALYKLRQHTPTLLAQQC 238
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 117 HTHHYVSNHSDHFHHIHR 170
H HH+ +H DH HH H+
Sbjct: 5 HHHHHDHHHHDHHHHDHQ 22
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 93 PSGRSHSFHTHHYVSNHSDHFHHIHR 170
P+ H H HH+ +H DH HH H+
Sbjct: 3 PNHHHHHDH-HHHDHHHHDHQHHDHQ 27
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 108 HSFHTHHYVSN-HSDHFHHIHR 170
H H HH+ + H DH HH H+
Sbjct: 11 HHHHDHHHHDHQHHDHQHHDHQ 32
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 113 FPYTPLRFEPFRPFPSYPQRFPIFNFPSPGFTDEQFPAMQNYP 241
+P P +P+ P YP + P +P PG+ + +P YP
Sbjct: 158 YPPQPYPAQPY-PQQGYPPQPPPQAYPQPGYPPQGYPPTGPYP 199
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 18 YPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGS 176
+ T+G P R H ++ S H HH+ +H H HH HR S
Sbjct: 405 HSTSGPFSPPRHHGHGGLEAIQTS-----KHQQDQHHHHHHHHHHRHHKHRSS 452
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 231 CIAGNCSSVNPGDGKLNIGNLCGYDGNGLNGSKRSGVYGKND 106
CIAG+CS + GDG + G DG+G + G Y + D
Sbjct: 558 CIAGSCSDLCEGDGFGDSGG--DGDGDGNHDGDGDGNYDEGD 597
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +3
Query: 105 SHSFHTHHYVSNHS-DHFHHIHRGS---RYLISHRPD 203
SH H HY NH DH H H S R ++ H+ D
Sbjct: 952 SHHHHYQHYQYNHHHDHQSHQHHDSHHHREVLDHKTD 988
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 90 PPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISH 194
P S + H HH+ ++ + HH H+ ++ SH
Sbjct: 943 PESHKRHRHSHHHHYQHYQYNHHHDHQSHQHHDSH 977
>SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)
Length = 510
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 117 HTHHYVSNHSDHFHHIHRGSR 179
HT ++ NH DH HH H +
Sbjct: 68 HTDNHHQNHHDHHHHHHHDKK 88
>SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)
Length = 238
Score = 28.3 bits (60), Expect = 4.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 114 FHTHHYVSNHSDHFHHIH 167
+H HH+ +H D+ HH H
Sbjct: 101 YHHHHHYHHHLDYDHHYH 118
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 24 TTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDH 152
T+ S P Q++ S SH H HH + NH+ H
Sbjct: 105 TSSSSPPPSSSSSQSLPPPPSSSSQPSSHHHHHHHLLHNHNHH 147
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 105 SHSFHTHHYVSNHSDHFHHIHRGSR 179
++ H HH +H H HH HR R
Sbjct: 728 TNDHHNHHAHYHHRRHHHHHHRRRR 752
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 105 SHSFHTHHYVSNHSDHFHHIHRGSR 179
++ H HH +H H HH HR R
Sbjct: 755 TNDHHNHHAHYHHRRHHHHHHRRRR 779
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 92 PIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 193
P+R KS +P P+ P R YP R P+ +P
Sbjct: 906 PVRPKSGYPVRPMGGYPVRHVGGYPVR-PVGGYP 938
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 29 RGVGAFAYQDSSGN--RPFFRFTPIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 193
R G + + SG RP + P+R +P P+ P RP YP R P+ +P
Sbjct: 900 RPKGGYPVRPKSGYPVRPMGGY-PVRHVGGYPVRPVGGYPVRPVGGYPVR-PVGGYP 954
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 29 RGVGAFAYQDSSGN--RPFFRFTPIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 193
R VG + + G RP + P+R +P P+ P RP YP R P+ +P
Sbjct: 924 RHVGGYPVRPVGGYPVRPVGGY-PVRPVGGYPVRPVGGYPVRPVGGYPVR-PVGGYP 978
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 71 RPFFRFTPIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFPSPGFTDEQ 217
RP + P ++ PY R RP P Y +R N P P + D +
Sbjct: 65 RPPYERPPSESRPRPPYDDRRTSETRPRPPYDERRVSENRPKPPYDDRR 113
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 93 PSGRSHSFHTHHYVSNHSDHFHH 161
P R H H HH+ NH H HH
Sbjct: 41 PRHRYH--HHHHHQHNHHQHHHH 61
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLIS 191
H+ H HH+ NH H H ++I+
Sbjct: 53 HNHHQHHHHHNHHHHHQQHHHHHHHIIN 80
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +3
Query: 60 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIH 167
H+ H + H H HH+ +H H HH H
Sbjct: 43 HRYHHHHHHQHNHHQHHHHHNHHH--HHQQHHHHHH 76
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRY 182
H +H HH+ H+ H HH H +
Sbjct: 43 HRYHHHHH-HQHNHHQHHHHHNHHH 66
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +3
Query: 60 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISH 194
H +H G SH H H + ++ H HH H + SH
Sbjct: 315 HSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHSHDNHGHSH 359
>SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 75 HFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLIS 191
+ S +PP H +H HH NH H HH HR + I+
Sbjct: 219 NISTTPPQ---HHYHHHH--HNHYSHNHH-HRNIIFTIT 251
>SB_29569| Best HMM Match : NAM (HMM E-Value=4.8)
Length = 375
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -2
Query: 253 AELIRIVLHRGELFVGESGR--WEIKYREP 170
A + R V+H GE+++G GR E K+R P
Sbjct: 27 ASVPRYVVHPGEVYIGRGGRGLLESKWRNP 56
>SB_27152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 189 SHRPDSPTNSSPRCRTIRISSARSPEPRLARVSVTK 296
S PD PT+S R ++SS S +PR VS T+
Sbjct: 11 STAPDKPTSSPERVVEEQVSSEISQQPRRLSVSSTE 46
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 87 SPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSS 221
SPPS S H HH H HH + ++I P SP+ SS
Sbjct: 444 SPPSTSSSQRHHHH------PHHHHSAIITIHIIITAPSSPSTSS 482
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 87 SPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSS 221
SPPS S H HH H HH + ++I P SP+ SS
Sbjct: 150 SPPSTSSSQRHHHH------PHHHHSAITTIHIIITAPSSPSISS 188
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 87 SPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSS 221
SPPS S H HH H HH + ++I P SP+ SS
Sbjct: 312 SPPSTSSSQRHHHH------PHHHHSAITTIHIIITAPSSPSISS 350
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 87 SPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSS 221
SPPS S H HH H HH + ++I P SP+ SS
Sbjct: 378 SPPSTSSSQRHHHH------PHHHHSAITTIHIIITAPSSPSISS 416
>SB_5609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 75 HFSDSPPSGRSH---SFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSP 224
HF+D+ S H SF H Y+S D + G ++ P +++SP
Sbjct: 3 HFTDTLISANIHLCGSFGDHSYLSTRVDRIEFLQPGDPLVLERPPPRWSSNSP 55
>SB_47560| Best HMM Match : CM_2 (HMM E-Value=0.82)
Length = 384
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 158 SYPQRFPIF--NFPSPGFTDEQFPA 226
SYPQRFP N P+PG FPA
Sbjct: 288 SYPQRFPQSKPNSPTPGRQPTPFPA 312
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 9 HQLYPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSD---HFHHIHRGSR 179
H +P++ S+ I IH H S S S HH+ S+ S H HH H S
Sbjct: 71 HHHHPSSSSSII--IIIHH---HHPSSSSSSSSIIIIHHHHPSSSSIIIIHHHHHHPSSS 125
Query: 180 YLISH 194
+I+H
Sbjct: 126 SIINH 130
>SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26)
Length = 245
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 41 AFAYQDSSGNRPFFRFTPIRTKSFFPYTPLRFEPFRPFPSYPQRFPIF-NFPSPGF 205
A Q + G RP+ +P+ + + P ++ P P YP PIF + P P +
Sbjct: 154 AIGPQPTQGFRPYPGSSPVLSPQVYRGYPFQYPGTPPPPMYPAFPPIFPSSPPPEY 209
>SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 556
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 131 RFEPFRPFPSYPQRFPIFNFPSPGFTDEQFPA 226
+++ F+ +P YP+R I N+ PG DE P+
Sbjct: 366 KYQGFKVYPDYPKR--ISNWGLPGKVDELAPS 395
>SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36)
Length = 330
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 117 HTHHYVSNHSDHFHHIH 167
H HH +NH DH HH H
Sbjct: 279 HQHH--NNHHDHQHHYH 293
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 27.1 bits (57), Expect = 9.4
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 102 RSHSFHTHHYVSNHSDHFHH 161
+ H FH HH+ ++++ H+ H
Sbjct: 1046 QQHQFHHHHHHTHYNYHYRH 1065
>SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)
Length = 581
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIH 167
H +H HH + H+HH+H
Sbjct: 231 HHYH-HHLCHDRRHHYHHVH 249
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 96 SGRSHSFHTHHYVSNHSDHFHHIH 167
S H H HH+ +H H +H H
Sbjct: 565 STHPHHHHLHHHRHHHRHHHYHHH 588
>SB_13702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 99 GRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHR 197
G H ++ HH HS+H HH + R+ I HR
Sbjct: 144 GMGHDYYHHHC---HSNHNHHQQQNYRH-IPHR 172
>SB_5714| Best HMM Match : CBM_X (HMM E-Value=1.9)
Length = 975
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 241 RIVLHRGELFVGESGR--WEIKYREP 170
R V+H GE+++G GR E K+R P
Sbjct: 87 RYVVHPGEVYIGRGGRGLLESKWRNP 112
>SB_498| Best HMM Match : DUF1067 (HMM E-Value=5.8)
Length = 185
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 243 ISSARSPEPRLARVSVTKLLPLIPLIRTCP 332
ISS +S +P L +S T L L+ L+RTCP
Sbjct: 134 ISSDKSTDPTL--ISRTCPLTLVLLVRTCP 161
>SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85)
Length = 377
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 108 HSFHTHHYVSNHSDHFHHIHRGSRYLISH 194
+ ++ HHY H D +HH + Y H
Sbjct: 90 YHYYDHHYDDYHHDDYHHDYHHHDYHHDH 118
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 129 YVSNHS--DHFHHIHRGSRYLISHRPDSPTNSSPRCRTIRISSARSPEP 269
Y+ N+S H HH G R P + +SPR + +SS++SP P
Sbjct: 694 YIPNNSPVQHQHHDQYGMRL-----PGASIGASPRMQQQAMSSSQSPGP 737
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 168 RGSRYLISHRPDSPTNSSPRCRTIRISSARSPEP 269
+G+ Y+I+ P SP+ +SP+ I I + S P
Sbjct: 897 KGTLYVIASGPQSPSLTSPKTPDIPIFGSTSQRP 930
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 479 CY*QLFLQLCDS*PLRCRSQTRSTKKTRH 393
C QL L DS PL QT+ST++ RH
Sbjct: 1005 CLIQLMDALLDSLPLAQSLQTKSTRQKRH 1033
>SB_11613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 117 HTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNS 218
H H++ +H H HH H+ + +I P SP++S
Sbjct: 48 HHHNHHRHHHHHHHHHHQPTITIII--PPSPSSS 79
>SB_10260| Best HMM Match : B1 (HMM E-Value=7.6)
Length = 138
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 3 LIHQLYPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHH 128
L+++ Y + SRI + + ++ D P SG++ + H H
Sbjct: 95 LLNRAYKSANRKAASRILVKENCHYYLDLPNSGKTLNVHGLH 136
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,508,526
Number of Sequences: 59808
Number of extensions: 343991
Number of successful extensions: 1501
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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