Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B08f
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   0.44 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   0.44 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   1.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    19   9.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    19   9.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       19   9.5  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +3

Query: 123 LKPLRIIKTIVLGLPFLY 176
           L PL++++T++LG   +Y
Sbjct: 28  LSPLKVLQTVILGTTCIY 45


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +3

Query: 123 LKPLRIIKTIVLGLPFLY 176
           L PL++++T++LG   +Y
Sbjct: 28  LSPLKVLQTVILGTTCIY 45


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 107 GCLRVIKTTSYN*NYCVGTSFSLFFPQSLIHAIC*HY---KKNY 229
           G + VI T  Y+ N CV     L F + L   +  HY    KNY
Sbjct: 298 GPVFVILTLLYSLNSCVNPWIYLAFNRELPRLLLRHYTASSKNY 341


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 157 NTIVLIIRSGFNYAQTSEKIVLQNSC-LFSK 68
           ++I+   +  FN++Q   KI+LQN+  LF K
Sbjct: 91  SSIIDKTKISFNFSQGPVKIMLQNATDLFIK 121


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 79  NKNFGEQFSRMFARN*N 129
           N   GEQF+R+   N N
Sbjct: 386 NIQTGEQFARLLRHNFN 402


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 79  NKNFGEQFSRMFARN*N 129
           N   GEQF+R+   N N
Sbjct: 393 NIQTGEQFARLLRHNFN 409


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 190 PYPRHLLTLQEKLH 231
           P PRH     +KLH
Sbjct: 30  PLPRHFNPPSDKLH 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,693
Number of Sequences: 336
Number of extensions: 1445
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)