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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B08f
         (319 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0197 + 1456296-1456668,1456930-1458746                           29   1.0  
11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,151...    29   1.0  
01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816     29   1.0  
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891...    27   2.4  
01_03_0095 + 12482908-12483111,12485906-12486340,12486434-12486835     27   2.4  
01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42...    27   3.2  
03_05_0096 + 20754478-20754584,20755548-20755677,20756212-207562...    27   4.2  
07_03_1766 + 29334576-29335790,29335865-29336362                       25   9.7  
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464...    25   9.7  
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566...    25   9.7  

>12_01_0197 + 1456296-1456668,1456930-1458746
          Length = 729

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 127 FNYAQTSEKIVLQNSCLFSKRKPRELTEKFTATLFTLNL 11
           FNY Q    + L  SCL   RK R   E    +L +++L
Sbjct: 688 FNYLQAKTLVKLAVSCLEEDRKKRPTMESIVESLLSVDL 726


>11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,
            1510195-1510256,1510406-1510479,1510812-1510864,
            1511072-1513550
          Length = 1134

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 127  FNYAQTSEKIVLQNSCLFSKRKPRELTEKFTATLFTLNL 11
            FNY Q    + L  SCL   RK R   E    +L +++L
Sbjct: 1093 FNYLQAKTLVKLAVSCLEEDRKKRPTMESIVESLLSVDL 1131


>01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816
          Length = 347

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +3

Query: 15  FSVNRVAVNFSVNSLGFRFENKQEFWRTIFSDVCA*LKPLRIIKTIVLGLPFLYSFLNPL 194
           FS N++ VN ++N+L  RF   +  W+  F+D    +  + ++      +    + +NP 
Sbjct: 263 FSDNQLRVNATMNALVTRFAANETEWKQRFADAMVKMGNIEVLTGGAGQIRLNCNVVNPS 322

Query: 195 STPSA 209
           S+ S+
Sbjct: 323 SSSSS 327


>02_05_0329 -
           27986261-27987372,27988632-27988638,27988999-27989128,
           27989157-27989216,27989318-27989970,27990056-27990526
          Length = 810

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 166 LFFILSSIPYPRHLLTLQEKLH 231
           LF  LSS+ +P+HLL +Q ++H
Sbjct: 168 LFERLSSLGHPKHLLDVQYRMH 189


>01_03_0095 + 12482908-12483111,12485906-12486340,12486434-12486835
          Length = 346

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 15  FSVNRVAVNFSVNSLGFRFENKQEFWRTIFSD 110
           FS N++ VN ++N+L  RF   +  W+  F+D
Sbjct: 265 FSDNQLRVNATMNALVTRFAANEAEWKQRFAD 296


>01_01_0056 +
           422141-422379,422524-422620,422697-422774,422871-422930,
           423019-423123,423743-423856,424145-424186,424380-424496,
           424568-424755,425502-425785,425869-425990,426118-426160,
           426265-426356,427331-427379,427623-427693,427793-427912,
           428586-428674,429266-429311,429926-429973
          Length = 667

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 223 FLVVSADGVDKGLRKE*RKGSPNTIVLIIR 134
           FL+ SADGV+  L+        +TIVL++R
Sbjct: 618 FLITSADGVEYNLKPAENALPRDTIVLVLR 647


>03_05_0096 +
           20754478-20754584,20755548-20755677,20756212-20756268,
           20756741-20756794,20757610-20758287
          Length = 341

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 203 WRG*GIEERIKKRK-SQHNSFNYTKWF*LRANIREN 99
           WR   I ER+K+ K S  +  N T W  LRA +R+N
Sbjct: 254 WRH--ISERLKEHKASVKHITNMTSWNELRARLRKN 287


>07_03_1766 + 29334576-29335790,29335865-29336362
          Length = 570

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 127 FNYAQTSEKIVLQNSCLFSKRKPRE 53
           F  +Q S+ +VLQN CL   RKP +
Sbjct: 397 FGNSQASKIVVLQN-CLLQPRKPMD 420


>05_01_0006 -
           44159-44206,44805-44850,45730-45818,46377-46394,
           46490-46609,46702-46772,47038-47086,47567-47658,
           47769-47811,47928-48049,48143-48426,48961-49148,
           49220-49336,49516-49557,49991-50101,50530-50688,
           50710-50769,50850-50927,51010-51103,51182-51483,
           51659-51721,51808-51936
          Length = 774

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 223 FLVVSADGVDKGLRKE*RKGSPNTIVLIIR 134
           F +++ADG +  L+      S +TIVLI+R
Sbjct: 725 FSILAADGAEYNLKPAENAPSRDTIVLILR 754


>03_05_0327 - 23154014-23154942,23155169-23155316,23155606-23156622,
            23156753-23157217,23160258-23161247
          Length = 1182

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 151  IVLIIRSGFNYAQTSEKIVLQNSCLFSKRKPRE 53
            I+++IRS F YA     +VL NS + S+  P E
Sbjct: 943  ILMLIRSSFTYAAKLLHLVLANS-IESQSPPEE 974


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,313,358
Number of Sequences: 37544
Number of extensions: 138178
Number of successful extensions: 226
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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