BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308B08f (319 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0197 + 1456296-1456668,1456930-1458746 29 1.0 11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,151... 29 1.0 01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816 29 1.0 02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 27 2.4 01_03_0095 + 12482908-12483111,12485906-12486340,12486434-12486835 27 2.4 01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42... 27 3.2 03_05_0096 + 20754478-20754584,20755548-20755677,20756212-207562... 27 4.2 07_03_1766 + 29334576-29335790,29335865-29336362 25 9.7 05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464... 25 9.7 03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 25 9.7 >12_01_0197 + 1456296-1456668,1456930-1458746 Length = 729 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 127 FNYAQTSEKIVLQNSCLFSKRKPRELTEKFTATLFTLNL 11 FNY Q + L SCL RK R E +L +++L Sbjct: 688 FNYLQAKTLVKLAVSCLEEDRKKRPTMESIVESLLSVDL 726 >11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002, 1510195-1510256,1510406-1510479,1510812-1510864, 1511072-1513550 Length = 1134 Score = 28.7 bits (61), Expect = 1.0 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 127 FNYAQTSEKIVLQNSCLFSKRKPRELTEKFTATLFTLNL 11 FNY Q + L SCL RK R E +L +++L Sbjct: 1093 FNYLQAKTLVKLAVSCLEEDRKKRPTMESIVESLLSVDL 1131 >01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816 Length = 347 Score = 28.7 bits (61), Expect = 1.0 Identities = 16/65 (24%), Positives = 33/65 (50%) Frame = +3 Query: 15 FSVNRVAVNFSVNSLGFRFENKQEFWRTIFSDVCA*LKPLRIIKTIVLGLPFLYSFLNPL 194 FS N++ VN ++N+L RF + W+ F+D + + ++ + + +NP Sbjct: 263 FSDNQLRVNATMNALVTRFAANETEWKQRFADAMVKMGNIEVLTGGAGQIRLNCNVVNPS 322 Query: 195 STPSA 209 S+ S+ Sbjct: 323 SSSSS 327 >02_05_0329 - 27986261-27987372,27988632-27988638,27988999-27989128, 27989157-27989216,27989318-27989970,27990056-27990526 Length = 810 Score = 27.5 bits (58), Expect = 2.4 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 166 LFFILSSIPYPRHLLTLQEKLH 231 LF LSS+ +P+HLL +Q ++H Sbjct: 168 LFERLSSLGHPKHLLDVQYRMH 189 >01_03_0095 + 12482908-12483111,12485906-12486340,12486434-12486835 Length = 346 Score = 27.5 bits (58), Expect = 2.4 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 15 FSVNRVAVNFSVNSLGFRFENKQEFWRTIFSD 110 FS N++ VN ++N+L RF + W+ F+D Sbjct: 265 FSDNQLRVNATMNALVTRFAANEAEWKQRFAD 296 >01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-422930, 423019-423123,423743-423856,424145-424186,424380-424496, 424568-424755,425502-425785,425869-425990,426118-426160, 426265-426356,427331-427379,427623-427693,427793-427912, 428586-428674,429266-429311,429926-429973 Length = 667 Score = 27.1 bits (57), Expect = 3.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -1 Query: 223 FLVVSADGVDKGLRKE*RKGSPNTIVLIIR 134 FL+ SADGV+ L+ +TIVL++R Sbjct: 618 FLITSADGVEYNLKPAENALPRDTIVLVLR 647 >03_05_0096 + 20754478-20754584,20755548-20755677,20756212-20756268, 20756741-20756794,20757610-20758287 Length = 341 Score = 26.6 bits (56), Expect = 4.2 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 203 WRG*GIEERIKKRK-SQHNSFNYTKWF*LRANIREN 99 WR I ER+K+ K S + N T W LRA +R+N Sbjct: 254 WRH--ISERLKEHKASVKHITNMTSWNELRARLRKN 287 >07_03_1766 + 29334576-29335790,29335865-29336362 Length = 570 Score = 25.4 bits (53), Expect = 9.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 127 FNYAQTSEKIVLQNSCLFSKRKPRE 53 F +Q S+ +VLQN CL RKP + Sbjct: 397 FGNSQASKIVVLQN-CLLQPRKPMD 420 >05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394, 46490-46609,46702-46772,47038-47086,47567-47658, 47769-47811,47928-48049,48143-48426,48961-49148, 49220-49336,49516-49557,49991-50101,50530-50688, 50710-50769,50850-50927,51010-51103,51182-51483, 51659-51721,51808-51936 Length = 774 Score = 25.4 bits (53), Expect = 9.7 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 223 FLVVSADGVDKGLRKE*RKGSPNTIVLIIR 134 F +++ADG + L+ S +TIVLI+R Sbjct: 725 FSILAADGAEYNLKPAENAPSRDTIVLILR 754 >03_05_0327 - 23154014-23154942,23155169-23155316,23155606-23156622, 23156753-23157217,23160258-23161247 Length = 1182 Score = 25.4 bits (53), Expect = 9.7 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 Query: 151 IVLIIRSGFNYAQTSEKIVLQNSCLFSKRKPRE 53 I+++IRS F YA +VL NS + S+ P E Sbjct: 943 ILMLIRSSFTYAAKLLHLVLANS-IESQSPPEE 974 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,313,358 Number of Sequences: 37544 Number of extensions: 138178 Number of successful extensions: 226 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 226 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 398975940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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