Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308B08f
(319 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 2.7
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 2.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 3.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 3.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 6.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 6.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 6.3
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 20 8.3
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 20 8.3
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 20 8.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 8.3
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 107 RENCSPKFLFIFKTKAKRIN 48
++NC +L F T++KRI+
Sbjct: 397 KKNCCRSWLSKFPTRSKRID 416
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 107 RENCSPKFLFIFKTKAKRIN 48
++NC +L F T++KRI+
Sbjct: 397 KKNCCRSWLSKFPTRSKRID 416
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 135 EVVLITRKHPRKLFSKILVYFQNESQ 58
E + RK PR++ +I YF++ Q
Sbjct: 396 EEYMAYRKLPREMRQRITEYFEHRYQ 421
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 135 EVVLITRKHPRKLFSKILVYFQNESQ 58
E + RK PR++ +I YF++ Q
Sbjct: 364 EEYMAYRKLPREMRQRITEYFEHRYQ 389
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.2 bits (40), Expect = 6.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 95 SPKFLFIFKTKAKRINGEVYCHSIYAKSVD 6
SP+ LFI NG + +++Y + VD
Sbjct: 1226 SPQALFISWLPPLEPNGIITKYNLYTRVVD 1255
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.2 bits (40), Expect = 6.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 95 SPKFLFIFKTKAKRINGEVYCHSIYAKSVD 6
SP+ LFI NG + +++Y + VD
Sbjct: 1222 SPQALFISWLPPLEPNGIITKYNLYTRVVD 1251
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 20.2 bits (40), Expect = 6.3
Identities = 7/29 (24%), Positives = 15/29 (51%)
Frame = +3
Query: 6 IHRFSVNRVAVNFSVNSLGFRFENKQEFW 92
+H+F+ + +N+ +L +N FW
Sbjct: 184 LHQFATGQPDLNYRSAALDQEMKNVLTFW 212
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 8.3
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 184 RKE*RKGSPNTIVLIIRSGFNYAQTSEKIVLQNS 83
RKE K + I+ + + +NY + K + N+
Sbjct: 70 RKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNN 103
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 8.3
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 184 RKE*RKGSPNTIVLIIRSGFNYAQTSEKIVLQNS 83
RKE K + I+ + + +NY + K + N+
Sbjct: 70 RKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNN 103
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 8.3
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 184 RKE*RKGSPNTIVLIIRSGFNYAQTSEKIVLQNS 83
RKE K + I+ + + +NY + K + N+
Sbjct: 70 RKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNN 103
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 84 LVYFQNESQE 55
LVYFQNE ++
Sbjct: 342 LVYFQNEYEQ 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,453
Number of Sequences: 438
Number of extensions: 1764
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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