BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308B07f (521 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.14 SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 28 0.73 SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 27 2.2 SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 26 3.0 SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe... 26 3.0 SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 6.8 SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 25 6.8 SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 9.0 SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 25 9.0 SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 9.0 SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 9.0 SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 9.0 >SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 773 Score = 30.7 bits (66), Expect = 0.14 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = +2 Query: 137 AINEVGTSAESPTAFER---TREAVPSRGPSDVSANATSSTTVVVL 265 A NE + +P E T +VP G + SAN TSST++V L Sbjct: 189 ASNEASGTNNNPKEIEMNSDTTSSVPKSGSTSFSANVTSSTSMVYL 234 >SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 885 Score = 28.3 bits (60), Expect = 0.73 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = +2 Query: 212 GPSDVSANATSSTTVVVLWGDISAQDQNGLIEGYKVCYAAVTPPPRPEHKKIECQAIPSN 391 GP V N + ++V D+ NG+I G V A ++ E+K E +IP Sbjct: 196 GPETV-LNVPENAQLLVTEKDVIIYSSNGVIYGIHVSMADISQLLIDEYKTFEWSSIPGK 254 Query: 392 Q-THTVTLTELRKYVVYQIQVL 454 + +++T+ V Y ++ Sbjct: 255 RHGYSITVDSQSTPVTYLFVII 276 >SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr 3|||Manual Length = 479 Score = 26.6 bits (56), Expect = 2.2 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -1 Query: 131 YVFRRPTTPPNWLRHVNW 78 ++ +P T NW RH+NW Sbjct: 47 HIQEQPWTMQNWWRHLNW 64 >SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 275 Score = 26.2 bits (55), Expect = 3.0 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = +1 Query: 325 RGRDAAAAPRTQEDRMSSNTLQSDAHGHTDRAQEICGVPDTGARLHEAGRRSPER 489 R R + +P R N +SD + R + PD +R + RRSP+R Sbjct: 112 RLRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKR 166 >SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe|chr 2|||Manual Length = 350 Score = 26.2 bits (55), Expect = 3.0 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +2 Query: 59 IIEDHTANSHVLANLEEWSVY 121 +++ H N++++ N EWSVY Sbjct: 278 VVKHHICNANLMRNGAEWSVY 298 >SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|Schizosaccharomyces pombe|chr 2|||Manual Length = 2337 Score = 25.0 bits (52), Expect = 6.8 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +2 Query: 41 NDTLHSIIEDHTANSHVLANLE 106 +DTLH +I D+ + +L N+E Sbjct: 2045 SDTLHVLIRDYRESRKILLNIE 2066 >SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosaccharomyces pombe|chr 2|||Manual Length = 424 Score = 25.0 bits (52), Expect = 6.8 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = +2 Query: 338 PPPRPEHKKIECQAIPSNQTHTVTLTELRKYVVYQIQVLGYTRLGDGALS 487 P P+ +E P +T+TE+R+ V ++ +G+ ++ A S Sbjct: 334 PQLHPDGTFVETITKPKGLHSRITMTEMRRRVASMLEYIGHIQVEMAAQS 383 >SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 1822 Score = 24.6 bits (51), Expect = 9.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +2 Query: 113 SVYEIRMTAINEVGTSAESPTAFERTREAVPSRGPSDVSANATSSTTVVVLWGDI 277 +V+E + +I++V T+ S T E E +PS S+ S+ +T L ++ Sbjct: 557 NVFEQLLFSISKVTTNGPSETISEDIEEILPSLESSERSSTPFLNTNSASLKSEV 611 >SPAC3A12.13c |||translation initiation factor eIF3 complex subunit|Schizosaccharomyces pombe|chr 1|||Manual Length = 274 Score = 24.6 bits (51), Expect = 9.0 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +1 Query: 187 DQGSCAITRPERRISERHF 243 DQGS +TR +++I ER+F Sbjct: 69 DQGSNKMTRIQQKIQERNF 87 >SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosaccharomyces pombe|chr 2|||Manual Length = 2335 Score = 24.6 bits (51), Expect = 9.0 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +2 Query: 41 NDTLHSIIEDHTANSHVLANLE 106 +DTLH +I++ + ++L NLE Sbjct: 2042 SDTLHFLIKEFRSKRNILLNLE 2063 >SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccharomyces pombe|chr 1|||Manual Length = 697 Score = 24.6 bits (51), Expect = 9.0 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Frame = +2 Query: 263 LWGDISAQDQNG--LIEGYKVCYAAVTPPPRPEHKKIECQAIPSNQTHT 403 +W D+ A Q I+G C AA++ H K Q S HT Sbjct: 522 IWKDLIADGQISKLYIDGKHRCEAAISSHSSESHSKRTTQQPKSTPNHT 570 >SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1347 Score = 24.6 bits (51), Expect = 9.0 Identities = 13/52 (25%), Positives = 23/52 (44%) Frame = +2 Query: 5 FGTRITYKRSGTNDTLHSIIEDHTANSHVLANLEEWSVYEIRMTAINEVGTS 160 F T + Y +H +I+ +++H LA + S+Y E+G S Sbjct: 231 FNTDVQYNFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLS 282 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,275,886 Number of Sequences: 5004 Number of extensions: 46040 Number of successful extensions: 117 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 117 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 212331630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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