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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B07f
         (521 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    31   0.14 
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|...    28   0.73 
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c...    27   2.2  
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    26   3.0  
SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe...    26   3.0  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    25   6.8  
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa...    25   6.8  
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch...    25   9.0  
SPAC3A12.13c |||translation initiation factor eIF3 complex subun...    25   9.0  
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc...    25   9.0  
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha...    25   9.0  
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce...    25   9.0  

>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 773

 Score = 30.7 bits (66), Expect = 0.14
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 137 AINEVGTSAESPTAFER---TREAVPSRGPSDVSANATSSTTVVVL 265
           A NE   +  +P   E    T  +VP  G +  SAN TSST++V L
Sbjct: 189 ASNEASGTNNNPKEIEMNSDTTSSVPKSGSTSFSANVTSSTSMVYL 234


>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 885

 Score = 28.3 bits (60), Expect = 0.73
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +2

Query: 212 GPSDVSANATSSTTVVVLWGDISAQDQNGLIEGYKVCYAAVTPPPRPEHKKIECQAIPSN 391
           GP  V  N   +  ++V   D+     NG+I G  V  A ++     E+K  E  +IP  
Sbjct: 196 GPETV-LNVPENAQLLVTEKDVIIYSSNGVIYGIHVSMADISQLLIDEYKTFEWSSIPGK 254

Query: 392 Q-THTVTLTELRKYVVYQIQVL 454
           +  +++T+      V Y   ++
Sbjct: 255 RHGYSITVDSQSTPVTYLFVII 276


>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 479

 Score = 26.6 bits (56), Expect = 2.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 131 YVFRRPTTPPNWLRHVNW 78
           ++  +P T  NW RH+NW
Sbjct: 47  HIQEQPWTMQNWWRHLNW 64


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +1

Query: 325 RGRDAAAAPRTQEDRMSSNTLQSDAHGHTDRAQEICGVPDTGARLHEAGRRSPER 489
           R R  + +P     R   N  +SD    + R +     PD  +R  +  RRSP+R
Sbjct: 112 RLRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKR 166


>SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 59  IIEDHTANSHVLANLEEWSVY 121
           +++ H  N++++ N  EWSVY
Sbjct: 278 VVKHHICNANLMRNGAEWSVY 298


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
            Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 25.0 bits (52), Expect = 6.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 41   NDTLHSIIEDHTANSHVLANLE 106
            +DTLH +I D+  +  +L N+E
Sbjct: 2045 SDTLHVLIRDYRESRKILLNIE 2066


>SPBC1685.08 |||histone deacetylase complex subunit
           Cti6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 424

 Score = 25.0 bits (52), Expect = 6.8
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +2

Query: 338 PPPRPEHKKIECQAIPSNQTHTVTLTELRKYVVYQIQVLGYTRLGDGALS 487
           P   P+   +E    P      +T+TE+R+ V   ++ +G+ ++   A S
Sbjct: 334 PQLHPDGTFVETITKPKGLHSRITMTEMRRRVASMLEYIGHIQVEMAAQS 383


>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1822

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 113 SVYEIRMTAINEVGTSAESPTAFERTREAVPSRGPSDVSANATSSTTVVVLWGDI 277
           +V+E  + +I++V T+  S T  E   E +PS   S+ S+    +T    L  ++
Sbjct: 557 NVFEQLLFSISKVTTNGPSETISEDIEEILPSLESSERSSTPFLNTNSASLKSEV 611


>SPAC3A12.13c |||translation initiation factor eIF3 complex
           subunit|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 274

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 187 DQGSCAITRPERRISERHF 243
           DQGS  +TR +++I ER+F
Sbjct: 69  DQGSNKMTRIQQKIQERNF 87


>SPBC30D10.10c |tor1||phosphatidylinositol kinase
            Tor1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2335

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 41   NDTLHSIIEDHTANSHVLANLE 106
            +DTLH +I++  +  ++L NLE
Sbjct: 2042 SDTLHFLIKEFRSKRNILLNLE 2063


>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
           Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 697

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = +2

Query: 263 LWGDISAQDQNG--LIEGYKVCYAAVTPPPRPEHKKIECQAIPSNQTHT 403
           +W D+ A  Q     I+G   C AA++      H K   Q   S   HT
Sbjct: 522 IWKDLIADGQISKLYIDGKHRCEAAISSHSSESHSKRTTQQPKSTPNHT 570


>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1347

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +2

Query: 5   FGTRITYKRSGTNDTLHSIIEDHTANSHVLANLEEWSVYEIRMTAINEVGTS 160
           F T + Y        +H +I+   +++H LA  +  S+Y        E+G S
Sbjct: 231 FNTDVQYNFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLS 282


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,275,886
Number of Sequences: 5004
Number of extensions: 46040
Number of successful extensions: 117
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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