BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308B07f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_1013 + 10251463-10251858,10252366-10252434,10252545-102526... 29 3.0 10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 28 4.0 12_02_1077 - 25871439-25871453,25872805-25872867,25872976-25873977 27 6.9 10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 27 6.9 08_02_1629 + 28370720-28370992,28371183-28371287 27 6.9 03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 27 6.9 03_01_0553 - 4123634-4123690,4123756-4124469 27 6.9 05_07_0163 - 28094574-28094726,28095248-28095382,28095771-280959... 27 9.1 02_05_0213 + 26815889-26816475,26817718-26817788,26817985-268180... 27 9.1 >08_01_1013 + 10251463-10251858,10252366-10252434,10252545-10252652, 10253261-10253326,10254258-10254395,10255047-10255094, 10256292-10256398,10257228-10257302,10258317-10258368, 10258485-10259068,10259944-10260150,10260236-10260407 Length = 673 Score = 28.7 bits (61), Expect = 3.0 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 110 WSVYEIRMTAINEVGTSAESPTAFERTREAVPSRGP 217 WSV E M E ++ E+ T+ +PS+GP Sbjct: 479 WSVRETTMRESQETSSNTEARKTKNTTKSNIPSKGP 514 >10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695, 3384640-3384709,3385878-3386002,3387128-3387268, 3387362-3387519,3387644-3387803,3390136-3390213, 3390326-3390385,3390473-3390528,3391886-3392090, 3394107-3394192,3394296-3394406,3394536-3394607, 3395453-3395538,3395730-3395878,3396107-3396250, 3396335-3396442,3396997-3397027,3397609-3397713, 3398283-3398407,3398807-3398950,3399073-3399177, 3400748-3400799,3401549-3401696,3401936-3402130, 3402404-3402647,3403152-3403259,3403887-3404034, 3405467-3405525,3405876-3405945,3407008-3407333, 3407666-3409204,3410526-3410733,3410870-3410906, 3411024-3411072,3411143-3411271 Length = 2025 Score = 28.3 bits (60), Expect = 4.0 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%) Frame = +2 Query: 44 DTLHSIIEDHTANSHVLANLEEWSVYEIRMTA--INEVGTSAESPTAFERTREAVPSRGP 217 D++ ++ E + L + E YE+ + + E TS +P + +E + P Sbjct: 1042 DSVETVDEKKSLRYCCLGTIFEIMSYELFLQGKLLTETKTSDPAPVGSKEQKEPSVAPCP 1101 Query: 218 SDVSANATSSTTVVVLWGDISAQD-QNGLIEGYKV 319 SD+ STT+ L +S+ QN L+ KV Sbjct: 1102 SDIVLKWFDSTTMEDLVNHLSSNGYQNDLLHRAKV 1136 >12_02_1077 - 25871439-25871453,25872805-25872867,25872976-25873977 Length = 359 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = +2 Query: 77 ANSHVLANLEEW----SVYEIRMTAINEVGTSAESPTAFERTREAVPSRGPS 220 A +HVL N +E+ V ++ + +I +SA +P+ R +PSR PS Sbjct: 268 AITHVLHNKQEFPLAAGVDDLLVVSIGSGSSSAATPSTAAGWRTPLPSRSPS 319 >10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991, 4309330-4309539,4309649-4309961,4310035-4310130, 4310220-4310357,4310436-4310536,4310645-4310712, 4310800-4310849,4311790-4311848,4312399-4312530 Length = 728 Score = 27.5 bits (58), Expect = 6.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +2 Query: 143 NEVGTSAESPTAFERTREAVPSRGPSDVSANATSSTTVVVLWGD 274 +E E P E P+ GP DV+A A S V + GD Sbjct: 59 DEAEEPEEDPEEVGEGAEEAPAAGPGDVAAAAAESGPVAMEAGD 102 >08_02_1629 + 28370720-28370992,28371183-28371287 Length = 125 Score = 27.5 bits (58), Expect = 6.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +3 Query: 57 ALSKITRPIHMS*PIWRSGRSTKYV*LQ*TKWALQPKVLRLLRGPGKL 200 A S ++ P + P W S S L + WA +P+ R LR P ++ Sbjct: 5 AASSVSLPGARALPTWSSSVSGDSHSLALSSWAARPRSARPLRAPARM 52 >03_06_0123 - 31821915-31822094,31822187-31822324,31822413-31822817, 31822897-31823212,31823305-31823543,31823800-31823903, 31823987-31824145,31824326-31824510,31825318-31825427, 31826900-31826947,31827047-31827241,31827354-31827422, 31829521-31829620,31829879-31829940 Length = 769 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +1 Query: 364 DRMSSNTLQSDAHGHTDRAQEICGVPDTGA-RLHEAGRRSPER 489 + + NT+ DA + + +C V D G R++EA +++P + Sbjct: 284 EELERNTVNVDARTLSPSSNNVCTVDDPGTNRMNEADQQAPAK 326 >03_01_0553 - 4123634-4123690,4123756-4124469 Length = 256 Score = 27.5 bits (58), Expect = 6.9 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 412 DRAQEICGVPDTGARLHEAGRRSPERPPGYCKDF 513 +RA E +P+T L RRS RPP + DF Sbjct: 198 ERAVEESLLPETADGLRRLVRRSMHRPPPWMPDF 231 >05_07_0163 - 28094574-28094726,28095248-28095382,28095771-28095923, 28096010-28096208,28096312-28096349,28096849-28097020, 28097666-28097788,28097869-28098284 Length = 462 Score = 27.1 bits (57), Expect = 9.1 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = +2 Query: 320 CYAAVTPPPRPEHKKIECQAIPSNQT 397 C+ + +PPPRP H I+ A ++++ Sbjct: 11 CFLSPSPPPRPRHHSIKHLACAASRS 36 >02_05_0213 + 26815889-26816475,26817718-26817788,26817985-26818073, 26818910-26818991,26819089-26819204,26819290-26819451, 26819531-26819680,26819969-26820037,26820375-26820491 Length = 480 Score = 27.1 bits (57), Expect = 9.1 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +2 Query: 248 TTVVVLWGDISAQDQNGLIEGYK--VCYAAVTPP-PRPEHKKIECQAIPSNQTHTVTL 412 TT + D+ +++ ++E +K V Y PP P PE ++ E ++ S+ H V + Sbjct: 306 TTQKDIHSDMFSKEAGKVVEEFKLRVVYIPANPPSPVPEEEEDEIDSLDSDVDHEVQM 363 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,837,041 Number of Sequences: 37544 Number of extensions: 380966 Number of successful extensions: 1307 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1260 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1307 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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