Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308B06f
(392 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20543-1|AAA63151.1| 115|Drosophila melanogaster minute(1)1B pr... 156 9e-39
BT029917-1|ABM92791.1| 115|Drosophila melanogaster GH03995p pro... 156 9e-39
AY070831-1|AAL48453.1| 115|Drosophila melanogaster AT29875p pro... 156 9e-39
AL031581-5|CAA20892.1| 115|Drosophila melanogaster EG:115C2.7,F... 156 9e-39
AE014298-77|AAN09021.1| 115|Drosophila melanogaster CG7622-PD, ... 156 9e-39
AE014298-76|AAN09020.1| 115|Drosophila melanogaster CG7622-PC, ... 156 9e-39
AE014298-75|AAF45531.1| 115|Drosophila melanogaster CG7622-PB, ... 156 9e-39
AE014298-74|AAN09019.1| 115|Drosophila melanogaster CG7622-PA, ... 156 9e-39
AY051912-1|AAK93336.1| 801|Drosophila melanogaster LD39933p pro... 31 0.72
AE014134-2350|AAF53302.2| 800|Drosophila melanogaster CG7110-PB... 31 0.72
BT001654-1|AAN71409.1| 388|Drosophila melanogaster RE44531p pro... 27 8.9
AY119602-1|AAM50256.1| 176|Drosophila melanogaster LD22339p pro... 27 8.9
AY051494-1|AAK92918.1| 818|Drosophila melanogaster GH14774p pro... 27 8.9
AF313621-1|AAL78208.1| 818|Drosophila melanogaster CTCF protein. 27 8.9
AE014296-1240|AAF50573.2| 818|Drosophila melanogaster CG8591-PA... 27 8.9
AE014134-1121|AAN10589.1| 388|Drosophila melanogaster CG11050-P... 27 8.9
AE014134-1120|AAN10588.1| 388|Drosophila melanogaster CG11050-P... 27 8.9
AE014134-1119|AAF52408.1| 388|Drosophila melanogaster CG11050-P... 27 8.9
>U20543-1|AAA63151.1| 115|Drosophila melanogaster minute(1)1B
protein protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>BT029917-1|ABM92791.1| 115|Drosophila melanogaster GH03995p
protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AY070831-1|AAL48453.1| 115|Drosophila melanogaster AT29875p
protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AL031581-5|CAA20892.1| 115|Drosophila melanogaster
EG:115C2.7,FBgn0002579;RpL36 protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-77|AAN09021.1| 115|Drosophila melanogaster CG7622-PD,
isoform D protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-76|AAN09020.1| 115|Drosophila melanogaster CG7622-PC,
isoform C protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-75|AAF45531.1| 115|Drosophila melanogaster CG7622-PB,
isoform B protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-74|AAN09019.1| 115|Drosophila melanogaster CG7622-PA,
isoform A protein.
Length = 115
Score = 156 bits (379), Expect = 9e-39
Identities = 77/106 (72%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 179
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 180 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 317
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AY051912-1|AAK93336.1| 801|Drosophila melanogaster LD39933p
protein.
Length = 801
Score = 30.7 bits (66), Expect = 0.72
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 69 ITDKAIRIRPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 245
+T I R R L+T K + RDL++++ ++R++ELL+ K++R + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327
Query: 246 RLGTHIRAKRKREELSNVLAQMRK 317
RL ++ + E+L + K
Sbjct: 328 RLEAQLKTIQLEEQLEKERVRAEK 351
>AE014134-2350|AAF53302.2| 800|Drosophila melanogaster CG7110-PB
protein.
Length = 800
Score = 30.7 bits (66), Expect = 0.72
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 69 ITDKAIRIRPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 245
+T I R R L+T K + RDL++++ ++R++ELL+ K++R + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327
Query: 246 RLGTHIRAKRKREELSNVLAQMRK 317
RL ++ + E+L + K
Sbjct: 328 RLEAQLKTIQLEEQLEKERVRAEK 351
>BT001654-1|AAN71409.1| 388|Drosophila melanogaster RE44531p
protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 117 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 206
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
>AY119602-1|AAM50256.1| 176|Drosophila melanogaster LD22339p
protein.
Length = 176
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 117 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 206
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 83 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 114
>AY051494-1|AAK92918.1| 818|Drosophila melanogaster GH14774p
protein.
Length = 818
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 12 AVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHS 131
++ LR T K + + KAI +RPAR + K S
Sbjct: 131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170
>AF313621-1|AAL78208.1| 818|Drosophila melanogaster CTCF protein.
Length = 818
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 12 AVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHS 131
++ LR T K + + KAI +RPAR + K S
Sbjct: 131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170
>AE014296-1240|AAF50573.2| 818|Drosophila melanogaster CG8591-PA
protein.
Length = 818
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 12 AVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHS 131
++ LR T K + + KAI +RPAR + K S
Sbjct: 131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170
>AE014134-1121|AAN10589.1| 388|Drosophila melanogaster CG11050-PC,
isoform C protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 117 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 206
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
>AE014134-1120|AAN10588.1| 388|Drosophila melanogaster CG11050-PB,
isoform B protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 117 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 206
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
>AE014134-1119|AAF52408.1| 388|Drosophila melanogaster CG11050-PA,
isoform A protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 117 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 206
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,066,860
Number of Sequences: 53049
Number of extensions: 271472
Number of successful extensions: 794
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -