Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = -3

Query: 426 YQRDVSLDFSHVSLPLYLSALSQSLHNII------ITPSLSDLFHFLHSFDCFSPQFAI 268
           +Q  VS DF  ++ P+Y        HN+       +TP L+ +   L SF   S +  I
Sbjct: 426 FQYYVSYDFYKMNHPVYHKDPHYGFHNVTNTTLQNLTPQLNYISMKLQSFPLLSQRHQI 484


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 279 QFAIVFQGHISSLFKLKGWV 220
           ++  +F   +S +FK +GWV
Sbjct: 313 EYLNLFLEELSEIFKPRGWV 332


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 481 EVEPETIEVVDA 516
           E+EPETIE  DA
Sbjct: 287 ELEPETIESQDA 298


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 481 EVEPETIEVVDA 516
           E+EPETIE  DA
Sbjct: 520 ELEPETIESQDA 531


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 481 EVEPETIEVVDA 516
           E+EPETIE  DA
Sbjct: 520 ELEPETIESQDA 531


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,418
Number of Sequences: 336
Number of extensions: 2185
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)