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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B05f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938...   145   2e-35
01_05_0105 - 18155135-18155297,18155379-18155515,18155621-181557...    93   2e-19
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689...    57   1e-08
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731...    55   3e-08
05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962...    55   4e-08
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773...    34   0.060
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093...    29   1.7  
04_01_0518 - 6795833-6796450,6799940-6800164                           29   2.3  
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43...    29   2.3  
02_05_0895 - 32593155-32593190,32594228-32594279,32594544-325945...    28   4.0  
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616...    27   6.9  
07_01_0306 - 2188056-2188588,2188698-2188846,2189652-2189704           27   6.9  
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250...    27   6.9  
11_02_0076 - 8059267-8059387,8059406-8059857                           27   9.1  
06_03_0541 - 21944696-21944851,21944939-21945142,21945438-219474...    27   9.1  
05_03_0184 + 9339939-9340896,9341003-9341083,9341166-9341383,934...    27   9.1  
05_01_0512 - 4259162-4259849,4260209-4260432,4260854-4261071,426...    27   9.1  

>07_01_1199 +
           11391638-11391718,11393477-11393590,11393690-11393826,
           11393905-11394064
          Length = 163

 Score =  145 bits (352), Expect = 2e-35
 Identities = 66/162 (40%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
 Frame = +1

Query: 25  MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAG 204
           MR+E C+FCSS VYPGHGIQFVRND KIFRFCRSKCH  F             AYR   G
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHG 60

Query: 205 KELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEW 384
           K+++ D +FEFE++RN P +Y+R +  +T++A+  + +IR  R   +I +R +QG+  + 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVTEQTLKAISLITKIRHERQKKHITERQKQGKTKQR 120

Query: 385 QRDVREVQRDISLI--KSPAAGLKQRQALEATEMEVEPETIE 504
           +RD +E+++DI ++  K   +  K +  ++ ++ + E   +E
Sbjct: 121 ERDAKELEQDIQMLPKKVTLSTQKTKVVVKVSQQQTEENLME 162


>01_05_0105 -
           18155135-18155297,18155379-18155515,18155621-18155734,
           18155768-18155806,18156838-18156993
          Length = 202

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
 Frame = +1

Query: 106 IFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWT 285
           IFRFCRSKCH  F             AYR   GK+++ D +FEFE++RN P +Y+R +  
Sbjct: 66  IFRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHGKDMTQDSTFEFERKRNRPERYDRNVTA 125

Query: 286 KTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGL---KQR 456
           +T++A+  + +IR  R   +I +R +QG+  + +RD +E+++DI ++      L   K +
Sbjct: 126 QTLKAIPLITKIRHERHKKHITERQKQGKTKQRERDAKELEQDIQMLPKKDTMLSTQKTK 185

Query: 457 QALEATEMEVEPETIE 504
             ++ ++ + E   +E
Sbjct: 186 VVVKVSQQQTEENLME 201


>07_01_0849 +
           6896930-6896996,6897453-6897474,6897615-6897690,
           6897775-6897876,6898156-6898304,6898637-6898784
          Length = 187

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 30/99 (30%), Positives = 48/99 (48%)
 Frame = +1

Query: 13  ETNKMRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYR 192
           E  K+  E C F  +++YPG GI+F+R D ++F F  SKC   F              YR
Sbjct: 25  EALKVWTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKPAKLTWTAMYR 84

Query: 193 KTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKK 309
           K   K++  +     ++RR     Y+R +   T+E ++K
Sbjct: 85  KQHKKDIHAEA--VKKRRRTTKKPYSRSIVGATLEVIQK 121


>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
            34673237-34675178,34675588-34675658,34676158-34676307,
            34676963-34677038,34677131-34677232,34677707-34677855,
            34678214-34678364
          Length = 1172

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 28/92 (30%), Positives = 44/92 (47%)
 Frame = +1

Query: 34   ETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAGKEL 213
            E C F   ++YPG GI+F+R D ++F F  SKC   F              YRK   K++
Sbjct: 1016 ELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHKKDI 1075

Query: 214  SIDPSFEFEKRRNVPLKYNRELWTKTIEAMKK 309
              +     ++RR     Y+R +   T+E ++K
Sbjct: 1076 HAEA--VKKRRRTTKKPYSRSIVGATLEVIQK 1105


>05_05_0279 -
           23794964-23795111,23795486-23795634,23796120-23796221,
           23796309-23796384,23796578-23796588
          Length = 161

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 27/95 (28%), Positives = 46/95 (48%)
 Frame = +1

Query: 25  MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAG 204
           ++ E C F   ++YPG GI+F+R D ++F F  SKC   F              YRK   
Sbjct: 3   LKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHK 62

Query: 205 KELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKK 309
           K++  +     ++RR     Y+R +   ++E ++K
Sbjct: 63  KDIHAEA--VKKRRRTTKKPYSRSIVGASLEVIQK 95


>10_08_0829 -
           20871810-20872011,20873226-20873359,20873480-20877313,
           20878057-20878177,20878414-20878451,20879096-20879218,
           20879308-20879505,20880270-20880356
          Length = 1578

 Score = 34.3 bits (75), Expect = 0.060
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = +1

Query: 259 LKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPA 438
           L+   ++W +    +K+  E  ++ S +   QR  Q  E  WQR  R++++ +  +K   
Sbjct: 298 LRGEAKMWQRKTRKLKQGLETLKKVSTDKSKQRSEQDLEKMWQRKTRKLKQGLETLKKEC 357

Query: 439 AGLKQRQALEATEMEV 486
           A   ++Q+    E+ +
Sbjct: 358 ADKSKQQSELELELSI 373


>12_02_0693 -
           22207582-22207620,22208421-22208597,22209258-22209347,
           22210215-22210280,22210473-22210570,22210669-22210789,
           22210875-22212477,22213332-22213915
          Length = 925

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +1

Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471
           E +++  E+RQR       +RL + RE+E QR+     R    ++      ++R A EA
Sbjct: 526 ERLEREREMRQREEKEREQRRLEEERELEKQRERERAAR--QAVERATKEARERAAAEA 582


>04_01_0518 - 6795833-6796450,6799940-6800164
          Length = 280

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 286 KTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK-QRQA 462
           + IE  KK EE+ + R    I +     R++  +  V   Q+D  +++    G + +RQ 
Sbjct: 184 RQIEEEKKKEEVERGRLQKEIKEGRESLRKLRLKLGVDVPQQDQEIVQQLERGRQGKRQT 243

Query: 463 LEATEMEVEPETIE 504
           +E  E++VE E +E
Sbjct: 244 IE--ELQVEHEQLE 255


>03_01_0050 +
           430744-431337,432131-432249,432539-433084,433177-433483,
           433605-433773,433861-433960,435805-436103,436796-436869,
           437007-437442,437622-437650
          Length = 890

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 390 RRARSPERHLFDKVTSGWSETATSFRSHRNG 482
           RRARSPER L  ++   W  TA+S  S R G
Sbjct: 88  RRARSPERALVRRIAREW--TASSRTSPRGG 116


>02_05_0895 -
           32593155-32593190,32594228-32594279,32594544-32594584,
           32594795-32594906,32595195-32595268,32595349-32595587,
           32595710-32596678,32596725-32596878,32596957-32597244,
           32597393-32597534,32598679-32598752,32598870-32598890
          Length = 733

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -2

Query: 505 LLLSRVPLPFLWLLKLVAVSDQPLVTLSKRCLSGLLARLFATLPL 371
           L L      F W LK+V  +   L  L+K  +  +L  L  TLPL
Sbjct: 458 LFLHNFQQAFTWSLKIVTATKSALSVLTKPIMGPILEVLEFTLPL 502


>07_03_0697 +
           20759176-20759817,20760592-20760708,20761422-20761696,
           20761906-20762068,20762293-20762421,20762989-20763713,
           20763853-20764081
          Length = 759

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +1

Query: 193 KTAGKELSIDPSFEFE--KRRNVPLKYNRE--LWTKTIEAMKKVEEIRQRRSNN 342
           +T G+++ I  + E E   +R +  K N E  +W K  E MK+  + R+RRS +
Sbjct: 497 QTDGEDMEITFNTELEDLSKRILDRKVNNEKTVWEKHQEKMKEKRKSRKRRSKD 550


>07_01_0306 - 2188056-2188588,2188698-2188846,2189652-2189704
          Length = 244

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +1

Query: 238 EKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVE 381
           +K+RNV  +    LW ++ +    VEEI +      ++Q+++   +V+
Sbjct: 131 QKQRNVQKELEGNLWLQSFKQFTTVEEINELVQLGEMLQQIQLNPQVQ 178


>06_03_1208 - 28422941-28423139,28423854-28424434,28424705-28425078,
            28425235-28425339,28425902-28425970,28426084-28426156,
            28426395-28426478,28426616-28426648,28426731-28426790,
            28427535-28427627,28427851-28427970,28428804-28428886,
            28428887-28429007,28429114-28429164,28429245-28429333,
            28429429-28429561,28430220-28430354,28430581-28430952,
            28431679-28431796,28431883-28431998,28432131-28432442
          Length = 1106

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 466  LKLVAVSDQPLVTLSKRCLSGLLARLFATLPLCPVS 359
            L L  +++Q   ++S R LS +L  + + LPLCP S
Sbjct: 966  LILNVIAEQHTDSISSRPLSSVLEPVISYLPLCPNS 1001


>11_02_0076 - 8059267-8059387,8059406-8059857
          Length = 190

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +3

Query: 363 TGQRGRVAKRRARSPERH 416
           T QRG VA   ARSP RH
Sbjct: 109 TAQRGAVASAGARSPTRH 126


>06_03_0541 - 21944696-21944851,21944939-21945142,21945438-21947472,
            21947644-21947720,21948289-21948477,21949188-21949448,
            21949527-21949632,21951330-21951517,21951814-21951971,
            21952015-21952840,21952947-21953210
          Length = 1487

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 493  RVPLPFLWLLKLVAVSDQPLVTLS-KRCLSGLLARLFATLPLCPVSIA 353
            R+PLP  W+L  V   D P   LS    +    A LF  L L  +S A
Sbjct: 1162 RLPLPVHWILSAVCCIDDPKANLSTSYAVDVSKAGLFFLLGLEAISAA 1209


>05_03_0184 +
           9339939-9340896,9341003-9341083,9341166-9341383,
           9341796-9342019,9342409-9343096
          Length = 722

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 312 HFLHSFDCFSPQFAIVFQGHISSLFKLKGWVYR 214
           H  +  DCFS  F I    H S +  L  W+ +
Sbjct: 537 HLWNELDCFSSSFRIWVTAHKSYVESLNAWLQK 569


>05_01_0512 -
           4259162-4259849,4260209-4260432,4260854-4261071,
           4261154-4261234,4261342-4262299
          Length = 722

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 312 HFLHSFDCFSPQFAIVFQGHISSLFKLKGWVYR 214
           H  +  DCFS  F I    H S +  L  W+ +
Sbjct: 537 HLWNELDCFSSSFKIWVTAHKSYVESLNAWLQK 569


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,049,888
Number of Sequences: 37544
Number of extensions: 237500
Number of successful extensions: 805
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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