Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   2.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   8.7  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   8.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 394 KKRF-LLNRQLHKLS*FFEKISMQPL*YKPTYTAYN 290
           K RF +LN+Q++ L  +F+K  + P+  K T    N
Sbjct: 465 KIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLN 500


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 394 KKRF-LLNRQLHKLS*FFEKISMQPL*YKPTYTAYN 290
           K RF +LN+Q++ L  +F+K  + P+  K T    N
Sbjct: 190 KIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLN 225


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +1

Query: 274 LSLNAHYKPYTLVYIIRAALKSFQKTKTVYEAGDSTKNAFFNYTESNTNIY*CAKSTIS 450
           +SL+ +   + ++ I     KSF+       A D T      Y    T+ Y C   TI+
Sbjct: 86  VSLSGNSAVFIMLIISFMHKKSFKNFVNNVAALDETLAKLGQYINYETDYYVCLAMTIT 144


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 455 SACGDCYMVSR 487
           S C DCYM+ R
Sbjct: 67  SICEDCYMLFR 77


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 455 SACGDCYMVSR 487
           S C DCYM+ R
Sbjct: 67  SICEDCYMLFR 77


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 455 SACGDCYMVSR 487
           S C DCYM+ R
Sbjct: 67  SICEDCYMLFR 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,971
Number of Sequences: 336
Number of extensions: 2237
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)