Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LLX4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q8IL10 Cluster: Putative uncharacterized protein; n=3; ...    32   6.9  
UniRef50_Q237G9 Cluster: Putative uncharacterized protein; n=2; ...    32   9.2  
UniRef50_Q5A9Y1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_A6LLX4 Cluster: Putative uncharacterized protein; n=1;
           Thermosipho melanesiensis BI429|Rep: Putative
           uncharacterized protein - Thermosipho melanesiensis
           BI429
          Length = 387

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 24/81 (29%), Positives = 39/81 (48%)
 Frame = -3

Query: 324 LYFLVSISLMLIVNGLN*SNKNLKTKYI*NSILLFVTTFHGLNVCELF*TFIRGFFCIFL 145
           LYFL   +L++ +        N+K  ++ N  LLF + FHG+    +  TFI+ F  + L
Sbjct: 148 LYFLNVPALIIYIFAKKHLGINIKGSFVINLFLLFESFFHGIKF-TISDTFIQPFLFLNL 206

Query: 144 FCSSLNVSIRLSSNNLWIVPY 82
              S N    L  N L+ + +
Sbjct: 207 LEKSKNKKRMLFWNILFFLTF 227


>UniRef50_Q8IL10 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1191

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = -3

Query: 201  LNVCELF*TFIRGFFCIFLFCSSLNVSIRLSSNNLWIVPYKLDVTVN*DVIY 46
            LN+ +++ + I  FFC  +   +LN+  + SS NL +V Y +++ +   V+Y
Sbjct: 1049 LNMYKVYLSVIIIFFCFEIILHTLNMLFKSSSGNLTLVEYTIELVMWCCVLY 1100


>UniRef50_Q237G9 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 324

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +2

Query: 110 LNLILTFRLLQNRKIQKKPRMKV*NNSQTFRPWNVVTNSKI 232
           LNLI  F LL N++++ K   ++ NN++ F+   ++ NSKI
Sbjct: 126 LNLIGQFNLLSNQQMENKVLQQIINNNRGFQN-EIIRNSKI 165


>UniRef50_Q5A9Y1 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 418

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +3

Query: 6   IRHEVFFEINLFYCKLHLNLRSRLVCMEQSINCLNLT*YLRLDYYKIGKYKKNHE*KFKT 185
           I H + + I L +CKL  N + ++   +QS      T +     YKI  Y       F T
Sbjct: 7   IIHFLLYNIPLIHCKLFYNQQHKICNPKQSTPFFPFTGFKITRQYKISGYTLPVSMHFIT 66

Query: 186 IRKHLDHGML 215
           I  H +HG L
Sbjct: 67  I-SHCNHGQL 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,582,885
Number of Sequences: 1657284
Number of extensions: 7274902
Number of successful extensions: 14450
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14448
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)