Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308B03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.0  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   5.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
 Frame = +2

Query: 353  VSWL*IENCFYRYNCIKCLFE----------IKTIYILIFINCI 454
            + W  + NC Y + C  C++E          IK I I+I   CI
Sbjct: 1123 ICWNVLLNCVYLFLCGFCVYEFASDERIKLVIKAIIIMILSGCI 1166


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 398 IKCLFEIKTIYILIFINCIKSIQDNTRIFLI 490
           I CL  I  + + I I   K ++++T IFL+
Sbjct: 78  IMCLGVIGNVMVPIVIFKTKDMRNSTNIFLV 108


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 398 IKCLFEIKTIYILIFINCIKSIQDNTRIFLI 490
           I CL  I  + + I I   K ++++T IFL+
Sbjct: 78  IMCLGVIGNVMVPIVIFKTKDMRNSTNIFLV 108


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -3

Query: 330 LILYFLVSISLMLI 289
           L++Y LVS+SL+++
Sbjct: 283 LVIYTLVSVSLVMV 296


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 195 VCELF*TFIRGFFCIFLF 142
           V  +F  F+ G FCI  F
Sbjct: 72  VYNIFGAFVMGLFCILKF 89


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -3

Query: 330 LILYFLVSISLMLI 289
           L++Y LVS+SL+++
Sbjct: 283 LVIYTLVSVSLVMV 296


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 305 IDTKKYKISHNLQFADVSWL 364
           + T  Y+I  N Q  DV W+
Sbjct: 297 LPTHPYQIIKNQQVYDVPWI 316


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 305 IDTKKYKISHNLQFADVSWL 364
           + T  Y+I  N Q  DV W+
Sbjct: 297 LPTHPYQIIKNKQVYDVPWI 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,038
Number of Sequences: 336
Number of extensions: 2214
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)