BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308B03f (521 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 24 2.7 AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 23 8.2 AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 23 8.2 AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 23 8.2 AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 23 8.2 >AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin subunit AgBnu protein. Length = 803 Score = 24.2 bits (50), Expect = 2.7 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = +2 Query: 377 CFYRYNCIKCL 409 CF++ NCI+CL Sbjct: 33 CFFQKNCIECL 43 >AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 22.6 bits (46), Expect = 8.2 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = -2 Query: 505 ILLKIDQKYPSIILNTFDTI 446 ++ KI ++YP I+NT+ + Sbjct: 47 LISKIREEYPDRIMNTYSVV 66 >AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 22.6 bits (46), Expect = 8.2 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = -2 Query: 505 ILLKIDQKYPSIILNTFDTI 446 ++ KI ++YP I+NT+ + Sbjct: 47 LISKIREEYPDRIMNTYSVV 66 >AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 22.6 bits (46), Expect = 8.2 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = -2 Query: 505 ILLKIDQKYPSIILNTFDTI 446 ++ KI ++YP I+NT+ + Sbjct: 47 LISKIREEYPDRIMNTYSVV 66 >AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 22.6 bits (46), Expect = 8.2 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = -2 Query: 505 ILLKIDQKYPSIILNTFDTI 446 ++ KI ++YP I+NT+ + Sbjct: 47 LISKIREEYPDRIMNTYSVV 66 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 453,446 Number of Sequences: 2352 Number of extensions: 7917 Number of successful extensions: 10 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 47783067 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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