Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308A12f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.2
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 2.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 2.9
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 2.9
AY052395-1|AAL15469.1| 76|Tribolium castaneum tryptophan oxyge... 22 3.8
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 22 3.8
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 22 3.8
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 22 3.8
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 8.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 237 MASMNIVPYHMSPYGHPYQ 255
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 69 MASMNIVPYHMSPYGHPYQ 87
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 175 LSRRSFLPYHTFPYRLPFQ 231
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 22.2 bits (45), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 85 QGSTSTMFGRPTR*RSVPLASHNYGP 162
QGS+S+ G P + +VP S + GP
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGP 1120
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 320 WSPALTISKVLLSICSLLCDPNPDDPLV 403
WSPA T + P P DP V
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDPSV 135
>AY052395-1|AAL15469.1| 76|Tribolium castaneum tryptophan
oxygenase protein.
Length = 76
Score = 21.8 bits (44), Expect = 3.8
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 231 NHQKLHSQHVFII 269
N+Q +H +H+FI+
Sbjct: 44 NNQPVHDEHLFIV 56
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 3.8
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 231 NHQKLHSQHVFII 269
N+Q +H +H+FI+
Sbjct: 44 NNQPVHDEHLFIV 56
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 3.8
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 231 NHQKLHSQHVFII 269
N+Q +H +H+FI+
Sbjct: 44 NNQPVHDEHLFIV 56
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 407 EIARIYKTDREKYNELAREWT 469
+I +IY + EKY + E+T
Sbjct: 153 QIRQIYHQELEKYEQACNEFT 173
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -3
Query: 495 LTHHMAYFLVHSRANSLYF 439
+ ++M+Y ++ S A +LYF
Sbjct: 158 IDNNMSYIIIVSFATNLYF 176
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,416
Number of Sequences: 336
Number of extensions: 3546
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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