Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308A12f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 178 2e-45
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 126 8e-30
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 112 2e-25
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 107 5e-24
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 106 1e-23
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 95 3e-20
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 85 4e-17
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 6e-17
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 83 2e-16
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 4e-12
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 5e-10
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 58 4e-09
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 58 6e-09
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 48 4e-06
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 45 3e-05
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 41 5e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 40 0.001
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 40 0.002
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29) 29 1.8
SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19) 29 2.3
SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15) 29 2.3
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 29 2.3
SB_47019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) 29 3.1
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18) 28 4.1
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 4.1
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12) 28 5.4
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_4636| Best HMM Match : FGGY_N (HMM E-Value=7.3e-06) 28 5.4
SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7) 27 7.1
SB_46972| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 27 9.4
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 178 bits (434), Expect = 2e-45
Identities = 85/149 (57%), Positives = 103/149 (69%)
Frame = +2
Query: 35 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 214
N A KRI REL ++ DPP CSAGP G+DL+ W +TI+GP S Y+GGVFFL IHFP
Sbjct: 92 NQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 151
Query: 215 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDD 394
+DYPFKPPK G +CLDIL+ WSPALTISKVLLSICSLL D NP D
Sbjct: 152 SDYPFKPPK---------------GMVCLDILKDSWSPALTISKVLLSICSLLTDCNPAD 196
Query: 395 PLVPEIARIYKTDREKYNELAREWTRKYA 481
PLV IA +Y +R +++ A+EWT++YA
Sbjct: 197 PLVGSIAALYVQNRSEHDATAKEWTKRYA 225
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 126 bits (305), Expect = 8e-30
Identities = 58/115 (50%), Positives = 78/115 (67%), Gaps = 4/115 (3%)
Frame = +2
Query: 152 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL----RAQ 319
++G +PY G+F L I P YPF+PPKV F T IYHPNI+S+G ICLD L +
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 320 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 484
W PAL IS VL +I L+ +PNPDDPL+ EI+ +K ++ ++ E A+EWT K+AM
Sbjct: 62 WKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLKFAM 116
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 112 bits (269), Expect = 2e-25
Identities = 48/118 (40%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Frame = +2
Query: 128 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 307
++ +WQ I+ P PY G F + I FP +YPFKPPK+ F T+IYHPNI+ G +CL I
Sbjct: 22 NILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPI 80
Query: 308 LRAQ-WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 478
+ + W PA +V+ ++ +L+ DP P+ PL ++A Y D++K+ + A + T+KY
Sbjct: 81 ISPENWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKKKFMKNAEDCTKKY 138
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 107 bits (257), Expect = 5e-24
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Frame = +2
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILR----AQWSPALTISKVLLSICSLLCDPNPD 391
PF+PPKV F T IYHPNI+S+G ICLD L+ W PAL IS VL +I L+ +PNPD
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPD 99
Query: 392 DPLVPEIARIYKTDREKYNELAREWTRKYAM 484
DPL+ EI+ +K ++ ++ E A+EWT K+AM
Sbjct: 100 DPLMAEISNEFKYNKAQFLEKAKEWTLKFAM 130
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 106 bits (254), Expect = 1e-23
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2
Query: 35 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 214
N A KRI REL ++ DPP CSAGP G+DL+ W +TI+GP S Y+GGVFFL IHFP
Sbjct: 132 NQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 191
Query: 215 TDYPFKPPK 241
+DYPFKPPK
Sbjct: 192 SDYPFKPPK 200
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 95.1 bits (226), Expect = 3e-20
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +2
Query: 350 LLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 484
LLSICSLLCDPNPDDPLVP+IARIYKTD+ KYNELA+EWT+KYAM
Sbjct: 2 LLSICSLLCDPNPDDPLVPDIARIYKTDKPKYNELAKEWTKKYAM 46
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 84.6 bits (200), Expect = 4e-17
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Frame = +2
Query: 47 ALKRINRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 223
A++ + EL+ L +P + P + F W I GP + Y GG F + FP DY
Sbjct: 1125 AVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDY 1184
Query: 224 PFKPPKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVLLSIC 364
P+ PP F T+++HPNI +G +C+ IL +W+P + +LLS+
Sbjct: 1185 PYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVI 1244
Query: 365 SLLCDPNPDDPLVPEIARIYKTDRE 439
SLL +PN P + + +++ RE
Sbjct: 1245 SLLNEPNTFSPANVDASVMFRKWRE 1269
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 84.2 bits (199), Expect = 6e-17
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Frame = +2
Query: 77 DLGRDPPAQCSAGPHG-EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFT 253
+L + P SAG EDL+ W+ ++GP + Y+ G F ++ FP +YP +PP + F
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 254 TRIYHPNINSNGSICLDILR-------------AQWSPALTISKVLLSICSLLCDPNPDD 394
+ I+HPN++ NG +C+ IL +W P T+ ++LS+ S+L +PN +
Sbjct: 403 SDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDES 462
Query: 395 P 397
P
Sbjct: 463 P 463
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = +2
Query: 107 SAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI 262
SAGP G+ L+ W +TI+GP S Y+GGVFFL IHFPTDYPFKPPKV R+
Sbjct: 43 SAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKVGQAIRL 94
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 68.1 bits (159), Expect = 4e-12
Identities = 46/148 (31%), Positives = 71/148 (47%)
Frame = +2
Query: 38 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 217
S +K++ RE+ L DPP + ED+ QA+I GP FFLT
Sbjct: 103 SPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPR--------FFLT----- 149
Query: 218 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 397
+I+HPN+ NG IC++ L+ W P L I +VLL++ LL PNP+
Sbjct: 150 -------------KIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESA 196
Query: 398 LVPEIARIYKTDREKYNELAREWTRKYA 481
L E ++ + Y++ A+ +T +A
Sbjct: 197 LNEEAGKLLLERYDDYSKRAKMFTEIHA 224
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +2
Query: 116 PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNIN 280
P +D+ A I GP D+PY+GG F+ I P DYP +PP+V T ++PN+
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 281 SNGSICLDIL 310
NG +CL I+
Sbjct: 65 RNGKVCLSII 74
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 61.3 bits (142), Expect = 5e-10
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +2
Query: 8 VESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 187
+E QYN A+KR+ RE ++L R+ A P ++LF W T+ GP D+ + GG
Sbjct: 1 MEKQYNLR---SPAVKRLMREAKEL-RNATELYHAQPLEDNLFEWHFTVRGPPDTEFAGG 56
Query: 188 VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---AQWSPALTISKVLLS 358
+ I P +YP KPP + T + ICL + W P+ +I VL++
Sbjct: 57 RYHGRIILPPEYPMKPPSIMLLTP--NGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMA 114
Query: 359 ICSLL 373
I +
Sbjct: 115 IIGFM 119
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 58.0 bits (134), Expect = 4e-09
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 161 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPALT 337
P D Y+GG F ++ DYP PP IYHPN++ +GS+CL +L W+ +
Sbjct: 45 PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLL-DDWNESND 102
Query: 338 ISKVLLSICSLLCDPNPDDPLVP 406
+ ++ + L +PN +DPL P
Sbjct: 103 LEDLVQGLLFLFYNPNLEDPLSP 125
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +2
Query: 161 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 340
P D Y+GG F ++ TDYP P + T+IYHPN++ +C+ +L W + +
Sbjct: 45 PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLL-DDWQASNDL 102
Query: 341 SKVLLSICSLLCDPNPDDPL 400
++ + L +PN +DPL
Sbjct: 103 EDLVQGLLFLFYNPNLEDPL 122
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2
Query: 317 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 433
+WSPAL I VLLSI +LL PNPDDPL ++A +K +
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKVN 40
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 48.0 bits (109), Expect = 5e-06
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = +2
Query: 53 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQA---TIMGPV----DSPYQGGVF-FLTIH 208
KR+ +E QD+ R SA ++LF W TI G D G F L I
Sbjct: 737 KRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796
Query: 209 FPTDYPFKPPKV-AFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVLL 355
FP ++PF PP + RI + G+IC+++L + WS A T+ V+L
Sbjct: 797 FPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKGWSSAYTVEAVVL 847
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 125 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 256
++LF W T+ GP D+ + GG + I P +YP KPP + T
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 158 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVA-FTTRI 262
GPV +PY+GGV+ + + P YPFK P +A FT I
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFTIEI 91
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2
Query: 143 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 256
+A + GPVD+PY G F I FP YP PP V T
Sbjct: 9 RALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 152 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPK 241
I GP ++P++GG + L I P YPF PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 140 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI---YHPNINSNGSICL 301
++ I GP +PY G+F I P +YP PP + + +PN+ +G +C+
Sbjct: 636 FRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI 692
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 176 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 289
++ ++ L I +YP KPP V F ++I +NS G
Sbjct: 3 FENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 176 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 289
++ ++ L I +YP KPP V F ++I +NS G
Sbjct: 3 FENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 221 YPFKPPKVAFTTRIYHPNINSNG 289
+P P V FT+ ++HP I+ NG
Sbjct: 118 FPDSRPLVKFTSNVFHPQIHENG 140
>SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29)
Length = 1239
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 323 SPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDREK 442
S +LTISK + IC LL DPN + + + IY+ EK
Sbjct: 116 SSSLTISKFVPHICKLLGDPNSQVRERAIDTLVEIYRHVGEK 157
>SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19)
Length = 1150
Score = 29.1 bits (62), Expect = 2.3
Identities = 30/123 (24%), Positives = 46/123 (37%)
Frame = +3
Query: 144 KPQLWAQLTVLIKEEFSSLPYISLQTTLSNHQKLHSQHVFIILT*TVMVPSVLTFCVHSG 323
K Q WA + I + SL + + N + F VP G
Sbjct: 171 KEQAWAACLLDIADYCESLRSACSRGSAGNTAACNEVARFTETQNVSTVPDEQDMVSIGG 230
Query: 324 HQRSPYPKCCSQSAXFYAIPTQTTLWCQKLLGSIKQTEKSTMN*PVSGRGSMPCDESIVT 503
H P+ + A ++P TL LL S++ EKST+ G+ P D +I+
Sbjct: 231 HPDVTLPRDLYKKALQSSLPNLYTLALCDLLFSVETLEKSTL---TGFGGTEPLDPNIIA 287
Query: 504 STK 512
+ K
Sbjct: 288 AIK 290
>SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15)
Length = 140
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 196 EENSSLIRTVNWAHNCGLPMEQIFTV-WACRTLCW 95
E +S +R V WA N GLP I + CR + W
Sbjct: 35 EAHSDWVRDVAWAPNVGLPTSTIASCSQDCRVIIW 69
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 401 PKGRLGWDRIEXSRLRATLWIW*ALVTTVHAECQDRW 291
P RL W+R+E SR+ LW W V + Q W
Sbjct: 166 PLFRLHWNRVEMSRVMVFLW-WIKFALRVSMQKQINW 201
>SB_47019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 62 NRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSP--YQGGVFFLTIHFPTDYPFKP 235
++E++++ + PP G G + W + +DS + G+ + TD F+
Sbjct: 89 DKEIENIRKPPPPLVPLGRQGTECKTWLRMQLHDIDSDVRMRSGLRMKGTYNDTDIDFEE 148
Query: 236 PKVAFTTRIY 265
A TTR+Y
Sbjct: 149 ISKAETTRLY 158
>SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16)
Length = 980
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 125 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 226
E+ F W + ++ VDS + GGV+ L + P P
Sbjct: 186 EESFQWMSHVLPAVDSIHSGGVYCLCLVPPGGLP 219
>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
Length = 2111
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -1
Query: 473 SSSTHGLIHCTFLCLFYRS*QFLAPKGRLGWDRIEXSRLRATLWIW*ALVTTV 315
++STH CT L F F P ++ W +I L + + L+TT+
Sbjct: 1532 TNSTHTHCLCTHLTAFASD--FFVPPNKIDWSKITLENLLSNFTVTAILLTTI 1582
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 345 KCCSQSAXFYAIPTQTTLWCQKLLGSIKQTE 437
KCCSQ FYA +T C K L + E
Sbjct: 301 KCCSQGCTFYA-TAETAFLCSKCLNEYLRKE 330
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 174 GLSTGPIIVACQWNRSS-PCGPAEHCAGGSLPRSCNS 67
GL + A WN S C P A GSL +CNS
Sbjct: 803 GLRCDQCVSAYYWNPSGYGCSPCNCDASGSLATNCNS 839
>SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12)
Length = 186
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 90 IHQHNVRQAHTVKICSIGKPQLWAQLTVLIKE 185
+H+ N + +++C QLW L VLIK+
Sbjct: 56 LHRENYHDSERIQVCKGRIIQLWELLLVLIKQ 87
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 398 KGRLGWDRIEXSRLRATLWIW*ALVTTVHAECQDRWNH 285
+GRL D S R T W+ +T + C DRW H
Sbjct: 57 RGRLHSDEPSDSGERNTYWM--KQLTEFESSCTDRWGH 92
>SB_4636| Best HMM Match : FGGY_N (HMM E-Value=7.3e-06)
Length = 512
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 407 EIARIYKTDREKYNELAR 460
+IA+IY+T RE YNE R
Sbjct: 171 QIAKIYQTKRESYNECER 188
>SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7)
Length = 1815
Score = 27.5 bits (58), Expect = 7.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 362 CSLLCDPNPDDPLVPE 409
C + DPNP DP +P+
Sbjct: 1311 CGTITDPNPKDPYIPD 1326
>SB_46972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 380 PNPDDPLVPEIARIYKTDREKYNELAREW 466
P+P P E + +K + EKY L + W
Sbjct: 31 PSPAAPAPSEKLKAFKEEEEKYENLTKYW 59
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 317 QWSPALTISKVLLSICSLL 373
+WSP ++ K+LLS+ S+L
Sbjct: 9 RWSPVQSVEKILLSVISML 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,592,473
Number of Sequences: 59808
Number of extensions: 434510
Number of successful extensions: 1077
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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